Protein–RNA interactions for Protein: Q96PV0

SYNGAP1, Ras/Rap GTPase-activating protein SynGAP, humanhuman

Predictions only

Length 1,343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1Q96PV0 AC127537.2-201ENST00000439258 465 ntBASIC5.29□□□□□ -1.56
SYNGAP1Q96PV0 RPL23AP89-201ENST00000439324 255 ntBASIC5.29□□□□□ -1.56
SYNGAP1Q96PV0 AL390730.1-201ENST00000457106 692 ntTSL 2 BASIC5.29□□□□□ -1.56
SYNGAP1Q96PV0 RPL23AP24-201ENST00000458203 385 ntBASIC5.29□□□□□ -1.56
SYNGAP1Q96PV0 APOA2-207ENST00000470459 416 ntTSL 5 BASIC5.29□□□□□ -1.56
SYNGAP1Q96PV0 COX7A2P2-201ENST00000505291 250 ntBASIC5.29□□□□□ -1.56
SYNGAP1Q96PV0 AC026726.1-201ENST00000512859 601 ntBASIC5.29□□□□□ -1.56
SYNGAP1Q96PV0 SNORA25.10-201ENST00000515926 124 ntBASIC5.29□□□□□ -1.56
SYNGAP1Q96PV0 AC069120.1-201ENST00000521623 379 ntTSL 3 BASIC5.29□□□□□ -1.56
SYNGAP1Q96PV0 AC103798.1-201ENST00000532562 376 ntTSL 2 BASIC5.29□□□□□ -1.56
SYNGAP1Q96PV0 SNHG1-208ENST00000538266 347 ntTSL 3 BASIC5.29□□□□□ -1.56
SYNGAP1Q96PV0 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC5.29□□□□□ -1.56
SYNGAP1Q96PV0 AC092470.1-201ENST00000546187 132 ntBASIC5.29□□□□□ -1.56
SYNGAP1Q96PV0 FKBP1BP1-201ENST00000553366 325 ntBASIC5.29□□□□□ -1.56
SYNGAP1Q96PV0 AC106782.4-201ENST00000568264 210 ntBASIC5.29□□□□□ -1.56
SYNGAP1Q96PV0 AC098617.1-215ENST00000594798 1152 ntTSL 5 BASIC5.29□□□□□ -1.56
SYNGAP1Q96PV0 AC008739.3-201ENST00000603262 127 ntBASIC5.29□□□□□ -1.56
SYNGAP1Q96PV0 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC5.29□□□□□ -1.56
SYNGAP1Q96PV0 AC092608.2-201ENST00000624427 218 ntBASIC5.29□□□□□ -1.56
SYNGAP1Q96PV0 NAA50-211ENST00000630058 177 ntTSL 5 BASIC5.29□□□□□ -1.56
SYNGAP1Q96PV0 C6orf10-207ENST00000533191 2170 ntAPPRIS ALT2 TSL 1 (best) BASIC5.29□□□□□ -1.56
SYNGAP1Q96PV0 MYB-226ENST00000528774 2277 ntAPPRIS ALT1 TSL 1 (best) BASIC5.29□□□□□ -1.56
SYNGAP1Q96PV0 AC097461.1-201ENST00000568928 2821 ntBASIC5.29□□□□□ -1.56
SYNGAP1Q96PV0 GPATCH2L-214ENST00000621494 12396 ntAPPRIS P1 TSL 2 BASIC5.29□□□□□ -1.56
SYNGAP1Q96PV0 ATF7IP-214ENST00000540793 4142 ntAPPRIS P3 TSL 1 (best) BASIC5.29□□□□□ -1.56
SYNGAP1Q96PV0 RABL3-201ENST00000273375 3883 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
SYNGAP1Q96PV0 ABCB5-202ENST00000404938 5811 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
SYNGAP1Q96PV0 AC121333.1-201ENST00000567488 2709 ntBASIC5.29□□□□□ -1.56
SYNGAP1Q96PV0 FBXL13-207ENST00000455112 2274 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
SYNGAP1Q96PV0 TRIM69-201ENST00000329464 1901 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
SYNGAP1Q96PV0 FTX-210ENST00000603037 8347 ntTSL 5 BASIC5.28□□□□□ -1.56
SYNGAP1Q96PV0 RNU6-511P-201ENST00000363496 107 ntBASIC5.28□□□□□ -1.56
SYNGAP1Q96PV0 RNU6-1040P-201ENST00000383974 107 ntBASIC5.28□□□□□ -1.56
SYNGAP1Q96PV0 RNU6-26P-201ENST00000383985 107 ntBASIC5.28□□□□□ -1.56
SYNGAP1Q96PV0 SNORA24.1-201ENST00000384401 135 ntBASIC5.28□□□□□ -1.56
SYNGAP1Q96PV0 SNORA70C-201ENST00000384538 135 ntBASIC5.28□□□□□ -1.56
SYNGAP1Q96PV0 RNA5SP219-201ENST00000390940 113 ntBASIC5.28□□□□□ -1.56
SYNGAP1Q96PV0 AL139397.2-201ENST00000404529 772 ntBASIC5.28□□□□□ -1.56
SYNGAP1Q96PV0 NT5C3A-205ENST00000409467 1032 ntAPPRIS ALT1 TSL 5 BASIC5.28□□□□□ -1.56
SYNGAP1Q96PV0 VDAC1P9-201ENST00000412766 841 ntBASIC5.28□□□□□ -1.56
SYNGAP1Q96PV0 AL356387.2-201ENST00000422272 243 ntBASIC5.28□□□□□ -1.56
SYNGAP1Q96PV0 ACTR3BP6-201ENST00000422332 1241 ntBASIC5.28□□□□□ -1.56
SYNGAP1Q96PV0 SKA2P1-201ENST00000425592 390 ntBASIC5.28□□□□□ -1.56
SYNGAP1Q96PV0 AC093106.2-201ENST00000428212 385 ntBASIC5.28□□□□□ -1.56
SYNGAP1Q96PV0 AC243772.1-201ENST00000451620 410 ntBASIC5.28□□□□□ -1.56
SYNGAP1Q96PV0 CECR9-201ENST00000453421 199 ntBASIC5.28□□□□□ -1.56
SYNGAP1Q96PV0 RPL30P11-201ENST00000495304 339 ntBASIC5.28□□□□□ -1.56
SYNGAP1Q96PV0 RNA5SP249-201ENST00000516127 99 ntBASIC5.28□□□□□ -1.56
SYNGAP1Q96PV0 AP000827.1-201ENST00000527814 258 ntBASIC5.28□□□□□ -1.56
SYNGAP1Q96PV0 SNHG1-218ENST00000541615 748 ntTSL 5 BASIC5.28□□□□□ -1.56
SYNGAP1Q96PV0 AC096558.2-201ENST00000546678 506 ntTSL 3 BASIC5.28□□□□□ -1.56
SYNGAP1Q96PV0 AL355076.2-201ENST00000555736 544 ntTSL 5 BASIC5.28□□□□□ -1.56
SYNGAP1Q96PV0 MTCO3P23-201ENST00000561363 289 ntBASIC5.28□□□□□ -1.56
SYNGAP1Q96PV0 SLC14A2-AS1-204ENST00000592899 359 ntTSL 3 BASIC5.28□□□□□ -1.56
SYNGAP1Q96PV0 AL589765.7-201ENST00000601684 629 ntTSL 3 BASIC5.28□□□□□ -1.56
SYNGAP1Q96PV0 AC023043.4-201ENST00000612081 449 ntBASIC5.28□□□□□ -1.56
SYNGAP1Q96PV0 MIR6128-201ENST00000615528 109 ntBASIC5.28□□□□□ -1.56
SYNGAP1Q96PV0 STAMBPL1-202ENST00000371924 2208 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
SYNGAP1Q96PV0 CNGA1-209ENST00000544810 2722 ntAPPRIS ALT2 TSL 5 BASIC5.28□□□□□ -1.56
SYNGAP1Q96PV0 MLIP-213ENST00000514921 5743 ntAPPRIS ALT2 TSL 1 (best) BASIC5.28□□□□□ -1.56
SYNGAP1Q96PV0 PLCB4-204ENST00000378501 5833 ntAPPRIS P4 TSL 5 BASIC5.28□□□□□ -1.56
SYNGAP1Q96PV0 NXPH1-205ENST00000602349 1953 ntBASIC5.28□□□□□ -1.56
SYNGAP1Q96PV0 KIAA1456-203ENST00000524591 9587 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
SYNGAP1Q96PV0 MUC12-202ENST00000379442 16737 ntAPPRIS ALT2 TSL 5 BASIC5.28□□□□□ -1.56
SYNGAP1Q96PV0 LYST-202ENST00000389794 12985 ntTSL 5 BASIC5.28□□□□□ -1.56
SYNGAP1Q96PV0 TMEM59-205ENST00000371348 1911 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
SYNGAP1Q96PV0 GPR34-202ENST00000378142 1928 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
SYNGAP1Q96PV0 ZNF468-203ENST00000595646 4407 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
SYNGAP1Q96PV0 API5P2-201ENST00000397055 1498 ntBASIC5.27□□□□□ -1.57
SYNGAP1Q96PV0 PTK2-212ENST00000519419 4439 ntTSL 5 BASIC5.27□□□□□ -1.57
SYNGAP1Q96PV0 Y_RNA.5-201ENST00000362334 102 ntBASIC5.27□□□□□ -1.57
SYNGAP1Q96PV0 SNORA71.3-201ENST00000362582 128 ntBASIC5.27□□□□□ -1.57
SYNGAP1Q96PV0 Y_RNA.167-201ENST00000363735 109 ntBASIC5.27□□□□□ -1.57
SYNGAP1Q96PV0 Y_RNA.212-201ENST00000364177 102 ntBASIC5.27□□□□□ -1.57
SYNGAP1Q96PV0 UBBP2-201ENST00000376781 231 ntBASIC5.27□□□□□ -1.57
SYNGAP1Q96PV0 SNORD116-11-201ENST00000383882 92 ntBASIC5.27□□□□□ -1.57
SYNGAP1Q96PV0 SNORA75B-201ENST00000384053 137 ntBASIC5.27□□□□□ -1.57
SYNGAP1Q96PV0 SOD2P1-201ENST00000396543 562 ntBASIC5.27□□□□□ -1.57
SYNGAP1Q96PV0 SDHCP2-201ENST00000398565 501 ntBASIC5.27□□□□□ -1.57
SYNGAP1Q96PV0 MIR450B-201ENST00000401182 78 ntBASIC5.27□□□□□ -1.57
SYNGAP1Q96PV0 MIR548F4-201ENST00000408515 105 ntBASIC5.27□□□□□ -1.57
SYNGAP1Q96PV0 LINC01201-201ENST00000412420 294 ntTSL 3 BASIC5.27□□□□□ -1.57
SYNGAP1Q96PV0 RPS12P10-201ENST00000427031 377 ntBASIC5.27□□□□□ -1.57
SYNGAP1Q96PV0 AL080248.1-201ENST00000428954 388 ntTSL 3 BASIC5.27□□□□□ -1.57
SYNGAP1Q96PV0 AC015911.1-201ENST00000495111 156 ntBASIC5.27□□□□□ -1.57
SYNGAP1Q96PV0 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC5.27□□□□□ -1.57
SYNGAP1Q96PV0 IGKV1OR2-1-201ENST00000514060 354 ntBASIC5.27□□□□□ -1.57
SYNGAP1Q96PV0 snoU109.6-201ENST00000516831 118 ntBASIC5.27□□□□□ -1.57
SYNGAP1Q96PV0 RNU4ATAC10P-201ENST00000516967 122 ntBASIC5.27□□□□□ -1.57
SYNGAP1Q96PV0 AL035078.3-201ENST00000525382 241 ntTSL 3 BASIC5.27□□□□□ -1.57
SYNGAP1Q96PV0 AC090023.2-201ENST00000540875 545 ntTSL 3 BASIC5.27□□□□□ -1.57
SYNGAP1Q96PV0 AC025265.1-201ENST00000551299 497 ntTSL 3 BASIC5.27□□□□□ -1.57
SYNGAP1Q96PV0 AC019183.1-201ENST00000580524 505 ntTSL 3 BASIC5.27□□□□□ -1.57
SYNGAP1Q96PV0 AC090409.2-202ENST00000585706 604 ntTSL 5 BASIC5.27□□□□□ -1.57
SYNGAP1Q96PV0 LINC01533-202ENST00000588694 632 ntTSL 2 BASIC5.27□□□□□ -1.57
SYNGAP1Q96PV0 AP001972.3-202ENST00000603012 375 ntTSL 3 BASIC5.27□□□□□ -1.57
SYNGAP1Q96PV0 IGKV1OR2-118-201ENST00000603238 347 ntBASIC5.27□□□□□ -1.57
SYNGAP1Q96PV0 ATP5A1P2-202ENST00000616464 443 ntBASIC5.27□□□□□ -1.57
SYNGAP1Q96PV0 AL355365.1-201ENST00000616480 294 ntBASIC5.27□□□□□ -1.57
SYNGAP1Q96PV0 AC010378.1-201ENST00000619270 362 ntBASIC5.27□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 100.3 ms