Protein–RNA interactions for Protein: Q92902

HPS1, Hermansky-Pudlak syndrome 1 protein, humanhuman

Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1Q92902 AC005911.1-201ENST00000619883 456 ntTSL 5 BASIC5.45□□□□□ -1.54
HPS1Q92902 CASP1-217ENST00000640184 327 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
HPS1Q92902 ATP8B5P-203ENST00000430846 3962 ntTSL 2 BASIC5.45□□□□□ -1.54
HPS1Q92902 AC008758.3-201ENST00000507003 1829 ntBASIC5.45□□□□□ -1.54
HPS1Q92902 WDPCP-203ENST00000409120 5408 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
HPS1Q92902 KCNJ1-204ENST00000392665 4074 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
HPS1Q92902 FAM133A-201ENST00000322139 3292 ntAPPRIS P1 TSL 4 BASIC5.45□□□□□ -1.54
HPS1Q92902 PLEKHS1-204ENST00000369310 2046 ntAPPRIS ALT2 TSL 1 (best) BASIC5.45□□□□□ -1.54
HPS1Q92902 DSC1-201ENST00000257197 4271 ntAPPRIS ALT1 TSL 1 (best) BASIC5.45□□□□□ -1.54
HPS1Q92902 KIAA1841-205ENST00000453873 4294 ntAPPRIS P1 TSL 5 BASIC5.45□□□□□ -1.54
HPS1Q92902 OR4E2-202ENST00000641524 2855 ntAPPRIS P1 BASIC5.45□□□□□ -1.54
HPS1Q92902 BICRAL-201ENST00000314073 6530 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
HPS1Q92902 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC5.45□□□□□ -1.54
HPS1Q92902 MYBPC1-214ENST00000549145 4031 ntAPPRIS ALT2 TSL 5 BASIC5.45□□□□□ -1.54
HPS1Q92902 HERC4-205ENST00000412272 4211 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
HPS1Q92902 NFE2L2-206ENST00000446151 2399 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
HPS1Q92902 TEX9-209ENST00000561221 2297 ntTSL 5 BASIC5.44□□□□□ -1.54
HPS1Q92902 ZMAT1-201ENST00000372782 3185 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
HPS1Q92902 ZNF347-201ENST00000334197 7960 ntAPPRIS P3 TSL 1 (best) BASIC5.44□□□□□ -1.54
HPS1Q92902 Y_RNA.217-201ENST00000364214 105 ntBASIC5.44□□□□□ -1.54
HPS1Q92902 RNU6-755P-201ENST00000364400 103 ntBASIC5.44□□□□□ -1.54
HPS1Q92902 RN7SKP227-201ENST00000364445 330 ntBASIC5.44□□□□□ -1.54
HPS1Q92902 RN7SKP15-201ENST00000364742 309 ntBASIC5.44□□□□□ -1.54
HPS1Q92902 Y_RNA.534-201ENST00000384599 112 ntBASIC5.44□□□□□ -1.54
HPS1Q92902 MIR137-201ENST00000385223 102 ntBASIC5.44□□□□□ -1.54
HPS1Q92902 RNU6-239P-201ENST00000390990 99 ntBASIC5.44□□□□□ -1.54
HPS1Q92902 SF3B1-202ENST00000409915 600 ntTSL 2 BASIC5.44□□□□□ -1.54
HPS1Q92902 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC5.44□□□□□ -1.54
HPS1Q92902 ATP5A1P8-201ENST00000423669 1291 ntBASIC5.44□□□□□ -1.54
HPS1Q92902 LINC01435-201ENST00000425050 722 ntTSL 3 BASIC5.44□□□□□ -1.54
HPS1Q92902 AC108479.1-201ENST00000431142 427 ntBASIC5.44□□□□□ -1.54
HPS1Q92902 AC000374.1-201ENST00000434698 1745 ntBASIC5.44□□□□□ -1.54
HPS1Q92902 LINC01698-201ENST00000443636 727 ntTSL 3 BASIC5.44□□□□□ -1.54
HPS1Q92902 RPL5P7-201ENST00000444235 813 ntBASIC5.44□□□□□ -1.54
HPS1Q92902 RANP8-201ENST00000444720 713 ntBASIC5.44□□□□□ -1.54
HPS1Q92902 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC5.44□□□□□ -1.54
HPS1Q92902 Y_RNA.641-201ENST00000459414 105 ntBASIC5.44□□□□□ -1.54
HPS1Q92902 AC020890.1-201ENST00000491837 504 ntBASIC5.44□□□□□ -1.54
HPS1Q92902 AC023424.1-201ENST00000496058 459 ntBASIC5.44□□□□□ -1.54
HPS1Q92902 RNU6-347P-201ENST00000516658 105 ntBASIC5.44□□□□□ -1.54
HPS1Q92902 RNA5SP230-201ENST00000517039 122 ntBASIC5.44□□□□□ -1.54
HPS1Q92902 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC5.44□□□□□ -1.54
HPS1Q92902 AC005363.1-201ENST00000530779 351 ntBASIC5.44□□□□□ -1.54
HPS1Q92902 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC5.44□□□□□ -1.54
HPS1Q92902 AC127455.1-201ENST00000565496 145 ntBASIC5.44□□□□□ -1.54
HPS1Q92902 MIR4502-201ENST00000580432 81 ntBASIC5.44□□□□□ -1.54
HPS1Q92902 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC5.44□□□□□ -1.54
HPS1Q92902 MIR132-201ENST00000591554 101 ntBASIC5.44□□□□□ -1.54
HPS1Q92902 AC006272.2-201ENST00000594725 163 ntBASIC5.44□□□□□ -1.54
HPS1Q92902 ZNF682-208ENST00000596019 552 ntTSL 5 BASIC5.44□□□□□ -1.54
HPS1Q92902 AC008749.1-201ENST00000597650 306 ntBASIC5.44□□□□□ -1.54
HPS1Q92902 B3GNTL1P2-201ENST00000603673 288 ntBASIC5.44□□□□□ -1.54
HPS1Q92902 AC005828.6-201ENST00000606610 232 ntBASIC5.44□□□□□ -1.54
HPS1Q92902 Metazoa_SRP.134-201ENST00000610965 327 ntBASIC5.44□□□□□ -1.54
HPS1Q92902 AC008568.2-201ENST00000623862 2313 ntBASIC5.44□□□□□ -1.54
HPS1Q92902 AL355480.1-201ENST00000629041 99 ntBASIC5.44□□□□□ -1.54
HPS1Q92902 APAF1-205ENST00000547045 3744 ntAPPRIS ALT1 TSL 1 (best) BASIC5.44□□□□□ -1.54
HPS1Q92902 CDC42SE2-201ENST00000360515 3591 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
HPS1Q92902 YWHAZ-201ENST00000353245 2829 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
HPS1Q92902 SYTL2-204ENST00000389958 1943 ntTSL 2 BASIC5.44□□□□□ -1.54
HPS1Q92902 ZNF780A-204ENST00000455521 3600 ntAPPRIS ALT2 TSL 5 BASIC5.44□□□□□ -1.54
HPS1Q92902 SCN1A-209ENST00000635750 8299 ntAPPRIS P3 TSL 5 BASIC5.44□□□□□ -1.54
HPS1Q92902 AK9-201ENST00000285397 2566 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
HPS1Q92902 AC083899.1-201ENST00000454465 3819 ntBASIC5.44□□□□□ -1.54
HPS1Q92902 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC5.44□□□□□ -1.54
HPS1Q92902 NCOA1-206ENST00000407230 4745 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
HPS1Q92902 FASTKD1-204ENST00000453153 2967 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
HPS1Q92902 NOL4-202ENST00000535384 1853 ntTSL 2 BASIC5.43□□□□□ -1.54
HPS1Q92902 LINC01553-203ENST00000521074 4329 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
HPS1Q92902 POLE2-206ENST00000554396 1581 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
HPS1Q92902 Y_RNA.238-201ENST00000364441 102 ntBASIC5.43□□□□□ -1.54
HPS1Q92902 RNU6-926P-201ENST00000384075 107 ntBASIC5.43□□□□□ -1.54
HPS1Q92902 RNU6-429P-201ENST00000384582 108 ntBASIC5.43□□□□□ -1.54
HPS1Q92902 RNU6-1179P-201ENST00000384667 107 ntBASIC5.43□□□□□ -1.54
HPS1Q92902 SNORA40.19-201ENST00000390846 128 ntBASIC5.43□□□□□ -1.54
HPS1Q92902 RPL31P2-201ENST00000413849 377 ntBASIC5.43□□□□□ -1.54
HPS1Q92902 AC078883.1-203ENST00000416080 654 ntTSL 3 BASIC5.43□□□□□ -1.54
HPS1Q92902 AL121885.3-201ENST00000422833 115 ntTSL 3 BASIC5.43□□□□□ -1.54
HPS1Q92902 AC007679.3-201ENST00000434035 414 ntBASIC5.43□□□□□ -1.54
HPS1Q92902 AP000936.3-201ENST00000438127 255 ntBASIC5.43□□□□□ -1.54
HPS1Q92902 MIR205HG-206ENST00000440276 539 ntTSL 5 BASIC5.43□□□□□ -1.54
HPS1Q92902 AC034195.1-202ENST00000451031 610 ntTSL 3 BASIC5.43□□□□□ -1.54
HPS1Q92902 AC144530.1-201ENST00000452862 555 ntBASIC5.43□□□□□ -1.54
HPS1Q92902 LINC00504-201ENST00000505089 4672 ntTSL 2 BASIC5.43□□□□□ -1.54
HPS1Q92902 MIR892C-201ENST00000516410 77 ntBASIC5.43□□□□□ -1.54
HPS1Q92902 RNU7-121P-201ENST00000516604 62 ntBASIC5.43□□□□□ -1.54
HPS1Q92902 IGLVIV-53-201ENST00000520107 367 ntBASIC5.43□□□□□ -1.54
HPS1Q92902 AC103726.2-201ENST00000523318 411 ntTSL 2 BASIC5.43□□□□□ -1.54
HPS1Q92902 AL133481.2-201ENST00000538322 367 ntTSL 2 BASIC5.43□□□□□ -1.54
HPS1Q92902 SNHG1-218ENST00000541615 748 ntTSL 5 BASIC5.43□□□□□ -1.54
HPS1Q92902 AL355076.2-201ENST00000555736 544 ntTSL 5 BASIC5.43□□□□□ -1.54
HPS1Q92902 AC055872.1-201ENST00000570978 278 ntBASIC5.43□□□□□ -1.54
HPS1Q92902 CCDC178-202ENST00000383096 3391 ntAPPRIS ALT2 TSL 5 BASIC5.43□□□□□ -1.54
HPS1Q92902 GABRG2-217ENST00000639384 5360 ntTSL 5 BASIC5.42□□□□□ -1.54
HPS1Q92902 OAZ3-204ENST00000479764 3789 ntTSL 5 BASIC5.42□□□□□ -1.54
HPS1Q92902 HELLS-204ENST00000371332 2675 ntTSL 5 BASIC5.42□□□□□ -1.54
HPS1Q92902 KIAA1841-202ENST00000356719 2149 ntTSL 5 BASIC5.42□□□□□ -1.54
HPS1Q92902 ITCH-201ENST00000262650 3089 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
HPS1Q92902 USP8-201ENST00000307179 4243 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
HPS1Q92902 LINC02203-203ENST00000625989 1600 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 102 ms