Protein–RNA interactions for Protein: Q8N3C7

CLIP4, CAP-Gly domain-containing linker protein 4, humanhuman

Predictions only

Length 705 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4Q8N3C7 FAR2P1-203ENST00000440931 187 ntTSL 2 BASIC3.52□□□□□ -1.85
CLIP4Q8N3C7 AC092802.2-202ENST00000444665 371 ntTSL 5 BASIC3.52□□□□□ -1.85
CLIP4Q8N3C7 RPL23AP20-201ENST00000447965 421 ntBASIC3.52□□□□□ -1.85
CLIP4Q8N3C7 DPPA3P1-201ENST00000448050 469 ntBASIC3.52□□□□□ -1.85
CLIP4Q8N3C7 AC011897.1-201ENST00000450715 346 ntTSL 3 BASIC3.52□□□□□ -1.85
CLIP4Q8N3C7 AL353691.1-201ENST00000451332 387 ntBASIC3.52□□□□□ -1.85
CLIP4Q8N3C7 AC069549.1-201ENST00000451584 499 ntTSL 3 BASIC3.52□□□□□ -1.85
CLIP4Q8N3C7 LINC01546-201ENST00000457435 674 ntTSL 2 BASIC3.52□□□□□ -1.85
CLIP4Q8N3C7 RPS20P24-201ENST00000457473 361 ntBASIC3.52□□□□□ -1.85
CLIP4Q8N3C7 RPS23P7-201ENST00000466210 444 ntBASIC3.52□□□□□ -1.85
CLIP4Q8N3C7 AC055855.1-201ENST00000489563 579 ntBASIC3.52□□□□□ -1.85
CLIP4Q8N3C7 LINC01327-201ENST00000498413 535 ntTSL 3 BASIC3.52□□□□□ -1.85
CLIP4Q8N3C7 FTH1P21-201ENST00000512179 511 ntBASIC3.52□□□□□ -1.85
CLIP4Q8N3C7 AC092440.1-201ENST00000512563 571 ntTSL 4 BASIC3.52□□□□□ -1.85
CLIP4Q8N3C7 AP003718.1-201ENST00000529884 583 ntTSL 4 BASIC3.52□□□□□ -1.85
CLIP4Q8N3C7 AP000462.2-203ENST00000540545 715 ntTSL 5 BASIC3.52□□□□□ -1.85
CLIP4Q8N3C7 UTS2-201ENST00000054668 420 ntAPPRIS P4 TSL 1 (best) BASIC3.52□□□□□ -1.85
CLIP4Q8N3C7 SUB1P2-201ENST00000556401 297 ntBASIC3.52□□□□□ -1.85
CLIP4Q8N3C7 AL355073.1-201ENST00000560296 517 ntTSL 4 BASIC3.52□□□□□ -1.85
CLIP4Q8N3C7 AP005059.2-201ENST00000577527 578 ntTSL 3 BASIC3.52□□□□□ -1.85
CLIP4Q8N3C7 AC064805.2-201ENST00000582959 523 ntTSL 4 BASIC3.52□□□□□ -1.85
CLIP4Q8N3C7 AC008946.1-201ENST00000599756 421 ntTSL 3 BASIC3.52□□□□□ -1.85
CLIP4Q8N3C7 ZNF667-AS1-209ENST00000601875 495 ntTSL 3 BASIC3.52□□□□□ -1.85
CLIP4Q8N3C7 AC068790.3-201ENST00000602988 553 ntBASIC3.52□□□□□ -1.85
CLIP4Q8N3C7 AL137849.1-201ENST00000604767 169 ntBASIC3.52□□□□□ -1.85
CLIP4Q8N3C7 AL592436.1-201ENST00000605135 558 ntBASIC3.52□□□□□ -1.85
CLIP4Q8N3C7 RNA5SP108-201ENST00000605921 117 ntBASIC3.52□□□□□ -1.85
CLIP4Q8N3C7 AC069234.5-201ENST00000611056 416 ntBASIC3.52□□□□□ -1.85
CLIP4Q8N3C7 MIR378J-201ENST00000611988 109 ntBASIC3.52□□□□□ -1.85
CLIP4Q8N3C7 AC138393.3-201ENST00000618397 573 ntTSL 3 BASIC3.52□□□□□ -1.85
CLIP4Q8N3C7 DUXAP9-208ENST00000622815 614 ntBASIC3.52□□□□□ -1.85
CLIP4Q8N3C7 CR381572.1-201ENST00000625098 102 ntBASIC3.52□□□□□ -1.85
CLIP4Q8N3C7 RPS4Y2-201ENST00000629237 792 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
CLIP4Q8N3C7 MIR1321-201ENST00000637766 79 ntBASIC3.52□□□□□ -1.85
CLIP4Q8N3C7 AC026951.1-201ENST00000559530 2459 ntBASIC3.52□□□□□ -1.85
CLIP4Q8N3C7 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC3.52□□□□□ -1.85
CLIP4Q8N3C7 ENPP3-202ENST00000358229 3026 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
CLIP4Q8N3C7 AC004160.1-212ENST00000421121 2078 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
CLIP4Q8N3C7 AC011460.1-201ENST00000636268 1834 ntBASIC3.51□□□□□ -1.85
CLIP4Q8N3C7 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
CLIP4Q8N3C7 PPIG-207ENST00000448752 2498 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
CLIP4Q8N3C7 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
CLIP4Q8N3C7 AC110597.3-202ENST00000583493 3289 ntTSL 5 BASIC3.51□□□□□ -1.85
CLIP4Q8N3C7 OR6P1-202ENST00000641540 3255 ntAPPRIS P1 BASIC3.51□□□□□ -1.85
CLIP4Q8N3C7 LINC02431-201ENST00000503929 3601 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
CLIP4Q8N3C7 MIR372-201ENST00000362225 67 ntBASIC3.51□□□□□ -1.85
CLIP4Q8N3C7 Y_RNA.89-201ENST00000363031 102 ntBASIC3.51□□□□□ -1.85
CLIP4Q8N3C7 RNU6-263P-201ENST00000363811 107 ntBASIC3.51□□□□□ -1.85
CLIP4Q8N3C7 RNU6-761P-201ENST00000384148 107 ntBASIC3.51□□□□□ -1.85
CLIP4Q8N3C7 Y_RNA.548-201ENST00000384656 105 ntBASIC3.51□□□□□ -1.85
CLIP4Q8N3C7 AL049693.1-201ENST00000402760 611 ntBASIC3.51□□□□□ -1.85
CLIP4Q8N3C7 FGF7P8-201ENST00000402994 292 ntBASIC3.51□□□□□ -1.85
CLIP4Q8N3C7 MIR1250-201ENST00000408098 113 ntBASIC3.51□□□□□ -1.85
CLIP4Q8N3C7 AC138393.2-201ENST00000414742 246 ntBASIC3.51□□□□□ -1.85
CLIP4Q8N3C7 HMGB3P20-201ENST00000417997 600 ntBASIC3.51□□□□□ -1.85
CLIP4Q8N3C7 RPS15AP12-201ENST00000419498 388 ntBASIC3.51□□□□□ -1.85
CLIP4Q8N3C7 RPS15AP6-201ENST00000420703 385 ntBASIC3.51□□□□□ -1.85
CLIP4Q8N3C7 AC007283.2-201ENST00000424739 197 ntBASIC3.51□□□□□ -1.85
CLIP4Q8N3C7 LINC00375-201ENST00000433074 601 ntTSL 5 BASIC3.51□□□□□ -1.85
CLIP4Q8N3C7 MTCO3P18-201ENST00000440206 761 ntBASIC3.51□□□□□ -1.85
CLIP4Q8N3C7 AL162151.2-201ENST00000448875 158 ntBASIC3.51□□□□□ -1.85
CLIP4Q8N3C7 AC104308.1-201ENST00000454621 333 ntBASIC3.51□□□□□ -1.85
CLIP4Q8N3C7 SNORD108-201ENST00000459332 71 ntBASIC3.51□□□□□ -1.85
CLIP4Q8N3C7 RPL23AP41-201ENST00000484754 458 ntBASIC3.51□□□□□ -1.85
CLIP4Q8N3C7 AC079382.1-201ENST00000493346 557 ntBASIC3.51□□□□□ -1.85
CLIP4Q8N3C7 LINC00492-201ENST00000504436 593 ntTSL 3 BASIC3.51□□□□□ -1.85
CLIP4Q8N3C7 FTH1P9-201ENST00000513251 355 ntBASIC3.51□□□□□ -1.85
CLIP4Q8N3C7 AC018437.2-201ENST00000517369 389 ntTSL 5 BASIC3.51□□□□□ -1.85
CLIP4Q8N3C7 NDUFB9P3-201ENST00000521269 501 ntBASIC3.51□□□□□ -1.85
CLIP4Q8N3C7 AP003497.1-201ENST00000528472 562 ntBASIC3.51□□□□□ -1.85
CLIP4Q8N3C7 AP003034.1-201ENST00000534621 422 ntBASIC3.51□□□□□ -1.85
CLIP4Q8N3C7 AC092112.1-201ENST00000538329 640 ntTSL 3 BASIC3.51□□□□□ -1.85
CLIP4Q8N3C7 AC090023.1-201ENST00000545750 443 ntTSL 3 BASIC3.51□□□□□ -1.85
CLIP4Q8N3C7 AC008083.1-201ENST00000547748 663 ntTSL 2 BASIC3.51□□□□□ -1.85
CLIP4Q8N3C7 AL512310.1-201ENST00000548639 172 ntBASIC3.51□□□□□ -1.85
CLIP4Q8N3C7 AC120057.2-201ENST00000571520 271 ntBASIC3.51□□□□□ -1.85
CLIP4Q8N3C7 MIR3146-201ENST00000580367 79 ntBASIC3.51□□□□□ -1.85
CLIP4Q8N3C7 AL669831.4-202ENST00000590817 238 ntBASIC3.51□□□□□ -1.85
CLIP4Q8N3C7 AL590392.1-201ENST00000604960 446 ntBASIC3.51□□□□□ -1.85
CLIP4Q8N3C7 LARP7P1-201ENST00000605576 316 ntBASIC3.51□□□□□ -1.85
CLIP4Q8N3C7 AC008536.2-201ENST00000607284 349 ntBASIC3.51□□□□□ -1.85
CLIP4Q8N3C7 LINC00310-206ENST00000609947 892 ntTSL 5 BASIC3.51□□□□□ -1.85
CLIP4Q8N3C7 AC023043.4-201ENST00000612081 449 ntBASIC3.51□□□□□ -1.85
CLIP4Q8N3C7 AC083809.1-201ENST00000615051 472 ntBASIC3.51□□□□□ -1.85
CLIP4Q8N3C7 HOTAIRM1_2.1-201ENST00000616712 215 ntBASIC3.51□□□□□ -1.85
CLIP4Q8N3C7 GPR171-203ENST00000617554 960 ntAPPRIS P1 BASIC3.51□□□□□ -1.85
CLIP4Q8N3C7 AC091925.2-201ENST00000625059 256 ntBASIC3.51□□□□□ -1.85
CLIP4Q8N3C7 SRP54-214ENST00000630962 162 ntTSL 5 BASIC3.51□□□□□ -1.85
CLIP4Q8N3C7 EFCAB5-213ENST00000638539 168 ntTSL 5 BASIC3.51□□□□□ -1.85
CLIP4Q8N3C7 CCDC91-201ENST00000381259 2334 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
CLIP4Q8N3C7 LRRC39-203ENST00000370138 1466 ntTSL 5 BASIC3.51□□□□□ -1.85
CLIP4Q8N3C7 USP33-201ENST00000357428 4155 ntTSL 5 BASIC3.51□□□□□ -1.85
CLIP4Q8N3C7 NR5A2-201ENST00000236914 3115 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
CLIP4Q8N3C7 LINC02475-202ENST00000512678 2622 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
CLIP4Q8N3C7 LBR-202ENST00000338179 3812 ntAPPRIS P1 TSL 5 BASIC3.51□□□□□ -1.85
CLIP4Q8N3C7 BLM-208ENST00000560509 3966 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
CLIP4Q8N3C7 LRRC39-204ENST00000620882 1951 ntTSL 5 BASIC3.51□□□□□ -1.85
CLIP4Q8N3C7 GALNT1-201ENST00000269195 3847 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
CLIP4Q8N3C7 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC3.5□□□□□ -1.85
CLIP4Q8N3C7 FOXP2-207ENST00000393494 2664 ntAPPRIS P2 TSL 5 BASIC3.5□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 118.7 ms