Protein–RNA interactions for Protein: Q8N2C3

DEPDC4, DEP domain-containing protein 4, humanhuman

Predictions only

Length 294 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4Q8N2C3 AL356867.1-201ENST00000429623 299 ntBASIC5.35□□□□□ -1.55
DEPDC4Q8N2C3 AC087650.1-201ENST00000431445 468 ntBASIC5.35□□□□□ -1.55
DEPDC4Q8N2C3 AL132765.1-201ENST00000434165 553 ntBASIC5.35□□□□□ -1.55
DEPDC4Q8N2C3 AL353662.1-201ENST00000439099 327 ntBASIC5.35□□□□□ -1.55
DEPDC4Q8N2C3 SUMO1P3-201ENST00000439961 304 ntBASIC5.35□□□□□ -1.55
DEPDC4Q8N2C3 RPL7P5-201ENST00000471472 736 ntBASIC5.35□□□□□ -1.55
DEPDC4Q8N2C3 AL138787.2-202ENST00000479395 385 ntTSL 2 BASIC5.35□□□□□ -1.55
DEPDC4Q8N2C3 AC092059.1-201ENST00000485347 429 ntTSL 3 BASIC5.35□□□□□ -1.55
DEPDC4Q8N2C3 SNORA31.20-201ENST00000517111 133 ntBASIC5.35□□□□□ -1.55
DEPDC4Q8N2C3 MAL2-206ENST00000522187 547 ntTSL 4 BASIC5.35□□□□□ -1.55
DEPDC4Q8N2C3 AC021242.2-201ENST00000522765 454 ntTSL 3 BASIC5.35□□□□□ -1.55
DEPDC4Q8N2C3 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC5.35□□□□□ -1.55
DEPDC4Q8N2C3 AL359232.1-201ENST00000556361 442 ntTSL 3 BASIC5.35□□□□□ -1.55
DEPDC4Q8N2C3 AC087286.2-201ENST00000558980 660 ntTSL 3 BASIC5.35□□□□□ -1.55
DEPDC4Q8N2C3 AC104695.2-201ENST00000605056 775 ntBASIC5.35□□□□□ -1.55
DEPDC4Q8N2C3 AL365434.2-201ENST00000607979 234 ntBASIC5.35□□□□□ -1.55
DEPDC4Q8N2C3 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC5.35□□□□□ -1.55
DEPDC4Q8N2C3 SRRM1-203ENST00000447431 3691 ntAPPRIS ALT2 TSL 5 BASIC5.35□□□□□ -1.55
DEPDC4Q8N2C3 AIG1-208ENST00000494282 3393 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
DEPDC4Q8N2C3 GABRG2-224ENST00000640574 3150 ntTSL 5 BASIC5.35□□□□□ -1.55
DEPDC4Q8N2C3 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC5.35□□□□□ -1.55
DEPDC4Q8N2C3 RBBP6-203ENST00000381039 3384 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
DEPDC4Q8N2C3 ZNF782-208ENST00000535338 3296 ntAPPRIS P1 TSL 3 BASIC5.35□□□□□ -1.55
DEPDC4Q8N2C3 PRTG-201ENST00000389286 11967 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
DEPDC4Q8N2C3 CCR2-201ENST00000292301 2671 ntTSL 5 BASIC5.34□□□□□ -1.55
DEPDC4Q8N2C3 FAM162A-201ENST00000232125 801 ntTSL 2 BASIC5.34□□□□□ -1.55
DEPDC4Q8N2C3 HIST1H2BD-201ENST00000289316 789 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
DEPDC4Q8N2C3 RNU1-76P-201ENST00000362903 159 ntBASIC5.34□□□□□ -1.55
DEPDC4Q8N2C3 RNU6-827P-201ENST00000365553 106 ntBASIC5.34□□□□□ -1.55
DEPDC4Q8N2C3 AKAP14-204ENST00000371431 977 ntAPPRIS P3 TSL 1 (best) BASIC5.34□□□□□ -1.55
DEPDC4Q8N2C3 PAGE2-202ENST00000374968 551 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
DEPDC4Q8N2C3 SNORA51.9-201ENST00000384295 124 ntBASIC5.34□□□□□ -1.55
DEPDC4Q8N2C3 Y_RNA.471-201ENST00000384312 102 ntBASIC5.34□□□□□ -1.55
DEPDC4Q8N2C3 TRAJ38-201ENST00000390499 62 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
DEPDC4Q8N2C3 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
DEPDC4Q8N2C3 RN7SKP229-201ENST00000410465 302 ntBASIC5.34□□□□□ -1.55
DEPDC4Q8N2C3 Y_RNA.623-201ENST00000411128 95 ntBASIC5.34□□□□□ -1.55
DEPDC4Q8N2C3 AL355339.1-202ENST00000417542 458 ntTSL 2 BASIC5.34□□□□□ -1.55
DEPDC4Q8N2C3 TOMM20P4-201ENST00000427861 435 ntBASIC5.34□□□□□ -1.55
DEPDC4Q8N2C3 AL159987.2-201ENST00000432754 307 ntBASIC5.34□□□□□ -1.55
DEPDC4Q8N2C3 AL355339.1-201ENST00000434386 435 ntTSL 2 BASIC5.34□□□□□ -1.55
DEPDC4Q8N2C3 AL163193.1-201ENST00000444895 788 ntBASIC5.34□□□□□ -1.55
DEPDC4Q8N2C3 AL591623.2-201ENST00000449978 222 ntBASIC5.34□□□□□ -1.55
DEPDC4Q8N2C3 AC092916.1-201ENST00000497896 411 ntTSL 3 BASIC5.34□□□□□ -1.55
DEPDC4Q8N2C3 AC069360.1-201ENST00000503469 431 ntTSL 2 BASIC5.34□□□□□ -1.55
DEPDC4Q8N2C3 AC006296.2-201ENST00000507932 764 ntTSL 3 BASIC5.34□□□□□ -1.55
DEPDC4Q8N2C3 AL359273.1-201ENST00000510918 627 ntBASIC5.34□□□□□ -1.55
DEPDC4Q8N2C3 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC5.34□□□□□ -1.55
DEPDC4Q8N2C3 AP003733.2-201ENST00000529409 171 ntBASIC5.34□□□□□ -1.55
DEPDC4Q8N2C3 LINC02411-203ENST00000546180 959 ntTSL 4 BASIC5.34□□□□□ -1.55
DEPDC4Q8N2C3 AC089998.2-201ENST00000551856 277 ntTSL 3 BASIC5.34□□□□□ -1.55
DEPDC4Q8N2C3 AC100821.2-201ENST00000565668 440 ntTSL 2 BASIC5.34□□□□□ -1.55
DEPDC4Q8N2C3 MIR4701-201ENST00000583094 63 ntBASIC5.34□□□□□ -1.55
DEPDC4Q8N2C3 AC013244.1-201ENST00000604279 193 ntBASIC5.34□□□□□ -1.55
DEPDC4Q8N2C3 AC109309.2-201ENST00000612597 332 ntBASIC5.34□□□□□ -1.55
DEPDC4Q8N2C3 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC5.34□□□□□ -1.55
DEPDC4Q8N2C3 MIR6886-201ENST00000619864 61 ntBASIC5.34□□□□□ -1.55
DEPDC4Q8N2C3 ZNF347-201ENST00000334197 7960 ntAPPRIS P3 TSL 1 (best) BASIC5.34□□□□□ -1.55
DEPDC4Q8N2C3 PSMA4-201ENST00000044462 4411 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
DEPDC4Q8N2C3 PTPRD-205ENST00000397611 8242 ntTSL 5 BASIC5.34□□□□□ -1.56
DEPDC4Q8N2C3 PTPRD-213ENST00000537002 8224 ntTSL 1 (best) BASIC5.34□□□□□ -1.56
DEPDC4Q8N2C3 OR5A2-203ENST00000641673 9444 ntAPPRIS P1 BASIC5.34□□□□□ -1.56
DEPDC4Q8N2C3 ABCC13-202ENST00000463099 3842 ntBASIC5.33□□□□□ -1.56
DEPDC4Q8N2C3 LINC01102-204ENST00000451400 3778 ntTSL 2 BASIC5.33□□□□□ -1.56
DEPDC4Q8N2C3 AL359693.1-201ENST00000614959 2407 ntBASIC5.33□□□□□ -1.56
DEPDC4Q8N2C3 PARD3B-212ENST00000613457 7559 ntTSL 5 BASIC5.33□□□□□ -1.56
DEPDC4Q8N2C3 DENND4A-201ENST00000431932 5875 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
DEPDC4Q8N2C3 AC092681.1-201ENST00000297369 291 ntBASIC5.33□□□□□ -1.56
DEPDC4Q8N2C3 Y_RNA.26-201ENST00000362539 101 ntBASIC5.33□□□□□ -1.56
DEPDC4Q8N2C3 RN7SKP227-201ENST00000364445 330 ntBASIC5.33□□□□□ -1.56
DEPDC4Q8N2C3 RNU6-806P-201ENST00000365147 105 ntBASIC5.33□□□□□ -1.56
DEPDC4Q8N2C3 GTSF1L-201ENST00000373003 835 ntAPPRIS P3 BASIC5.33□□□□□ -1.56
DEPDC4Q8N2C3 RNU6-629P-201ENST00000384061 103 ntBASIC5.33□□□□□ -1.56
DEPDC4Q8N2C3 GPS2P1-201ENST00000411761 986 ntBASIC5.33□□□□□ -1.56
DEPDC4Q8N2C3 AC073333.1-201ENST00000418907 648 ntTSL 3 BASIC5.33□□□□□ -1.56
DEPDC4Q8N2C3 DPYD-AS1-201ENST00000422980 533 ntTSL 3 BASIC5.33□□□□□ -1.56
DEPDC4Q8N2C3 H2AFZP5-201ENST00000446960 382 ntBASIC5.33□□□□□ -1.56
DEPDC4Q8N2C3 AL590664.1-201ENST00000448065 339 ntBASIC5.33□□□□□ -1.56
DEPDC4Q8N2C3 AP006222.1-205ENST00000450734 457 ntBASIC5.33□□□□□ -1.56
DEPDC4Q8N2C3 LINC01005-202ENST00000451440 531 ntTSL 4 BASIC5.33□□□□□ -1.56
DEPDC4Q8N2C3 AC013470.1-201ENST00000453438 462 ntBASIC5.33□□□□□ -1.56
DEPDC4Q8N2C3 LINC01399-202ENST00000458450 244 ntBASIC5.33□□□□□ -1.56
DEPDC4Q8N2C3 SNORD125-201ENST00000459538 96 ntBASIC5.33□□□□□ -1.56
DEPDC4Q8N2C3 RPL23AP45-201ENST00000476406 468 ntBASIC5.33□□□□□ -1.56
DEPDC4Q8N2C3 FAM107B-218ENST00000479731 570 ntAPPRIS P1 TSL 3 BASIC5.33□□□□□ -1.56
DEPDC4Q8N2C3 RN7SKP35-201ENST00000517210 151 ntBASIC5.33□□□□□ -1.56
DEPDC4Q8N2C3 ANAPC15-205ENST00000535503 734 ntAPPRIS P3 TSL 3 BASIC5.33□□□□□ -1.56
DEPDC4Q8N2C3 AC007527.1-201ENST00000535528 313 ntTSL 2 BASIC5.33□□□□□ -1.56
DEPDC4Q8N2C3 AC092078.1-201ENST00000558370 325 ntTSL 3 BASIC5.33□□□□□ -1.56
DEPDC4Q8N2C3 AC018558.1-201ENST00000562591 459 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
DEPDC4Q8N2C3 MIR3614-201ENST00000581261 86 ntBASIC5.33□□□□□ -1.56
DEPDC4Q8N2C3 AC005288.1-201ENST00000582842 860 ntTSL 2 BASIC5.33□□□□□ -1.56
DEPDC4Q8N2C3 AC087749.1-202ENST00000585020 566 ntTSL 2 BASIC5.33□□□□□ -1.56
DEPDC4Q8N2C3 AC012313.4-201ENST00000596296 495 ntTSL 3 BASIC5.33□□□□□ -1.56
DEPDC4Q8N2C3 AC092070.2-201ENST00000597550 545 ntTSL 4 BASIC5.33□□□□□ -1.56
DEPDC4Q8N2C3 AC009318.2-201ENST00000610917 651 ntBASIC5.33□□□□□ -1.56
DEPDC4Q8N2C3 AC126915.2-201ENST00000610957 190 ntBASIC5.33□□□□□ -1.56
DEPDC4Q8N2C3 SDR42E1P4-201ENST00000620894 481 ntBASIC5.33□□□□□ -1.56
DEPDC4Q8N2C3 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC5.33□□□□□ -1.56
DEPDC4Q8N2C3 AC109462.4-201ENST00000637882 581 ntTSL 5 BASIC5.33□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 148.2 ms