Protein–RNA interactions for Protein: Q8IXQ3

C9orf40, Uncharacterized protein C9orf40, humanhuman

Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf40Q8IXQ3 AC093151.1-201ENST00000427711 313 ntBASIC2.77□□□□□ -1.97
C9orf40Q8IXQ3 MTND1P20-201ENST00000430341 950 ntBASIC2.77□□□□□ -1.97
C9orf40Q8IXQ3 AL590103.1-201ENST00000434488 307 ntBASIC2.77□□□□□ -1.97
C9orf40Q8IXQ3 AL357793.2-201ENST00000447056 850 ntTSL 3 BASIC2.77□□□□□ -1.97
C9orf40Q8IXQ3 AL078587.1-201ENST00000448580 542 ntTSL 5 BASIC2.77□□□□□ -1.97
C9orf40Q8IXQ3 AL008723.1-201ENST00000452181 590 ntTSL 5 BASIC2.77□□□□□ -1.97
C9orf40Q8IXQ3 AL355314.1-201ENST00000453639 316 ntTSL 5 BASIC2.77□□□□□ -1.97
C9orf40Q8IXQ3 AL158069.1-201ENST00000454131 455 ntTSL 5 BASIC2.77□□□□□ -1.97
C9orf40Q8IXQ3 AC234775.1-201ENST00000454247 670 ntBASIC2.77□□□□□ -1.97
C9orf40Q8IXQ3 AC091179.1-201ENST00000461606 579 ntBASIC2.77□□□□□ -1.97
C9orf40Q8IXQ3 RPS29P2-201ENST00000479278 136 ntBASIC2.77□□□□□ -1.97
C9orf40Q8IXQ3 AC004263.1-201ENST00000479327 332 ntBASIC2.77□□□□□ -1.97
C9orf40Q8IXQ3 LINC00888-204ENST00000487386 421 ntBASIC2.77□□□□□ -1.97
C9orf40Q8IXQ3 AP001025.2-201ENST00000490908 477 ntBASIC2.77□□□□□ -1.97
C9orf40Q8IXQ3 AC103783.1-201ENST00000520506 373 ntBASIC2.77□□□□□ -1.97
C9orf40Q8IXQ3 AP003718.1-201ENST00000529884 583 ntTSL 4 BASIC2.77□□□□□ -1.97
C9orf40Q8IXQ3 AC092745.2-201ENST00000537764 620 ntTSL 3 BASIC2.77□□□□□ -1.97
C9orf40Q8IXQ3 AC093012.1-203ENST00000548437 450 ntTSL 2 BASIC2.77□□□□□ -1.97
C9orf40Q8IXQ3 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC2.77□□□□□ -1.97
C9orf40Q8IXQ3 H3F3AP1-201ENST00000559984 334 ntBASIC2.77□□□□□ -1.97
C9orf40Q8IXQ3 AC002400.1-201ENST00000569310 726 ntBASIC2.77□□□□□ -1.97
C9orf40Q8IXQ3 AC136618.2-201ENST00000575091 400 ntBASIC2.77□□□□□ -1.97
C9orf40Q8IXQ3 Z99289.3-201ENST00000605586 594 ntBASIC2.77□□□□□ -1.97
C9orf40Q8IXQ3 AC131159.1-201ENST00000621854 213 ntBASIC2.77□□□□□ -1.97
C9orf40Q8IXQ3 AL035425.3-201ENST00000564206 4996 ntBASIC2.77□□□□□ -1.97
C9orf40Q8IXQ3 MTCO1P9-201ENST00000505577 1534 ntBASIC2.77□□□□□ -1.97
C9orf40Q8IXQ3 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
C9orf40Q8IXQ3 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC2.77□□□□□ -1.97
C9orf40Q8IXQ3 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC2.77□□□□□ -1.97
C9orf40Q8IXQ3 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
C9orf40Q8IXQ3 TAB3P1-202ENST00000452645 1634 ntBASIC2.76□□□□□ -1.97
C9orf40Q8IXQ3 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
C9orf40Q8IXQ3 BIRC3-206ENST00000532808 4238 ntAPPRIS P1 TSL 5 BASIC2.76□□□□□ -1.97
C9orf40Q8IXQ3 SLC35A1-201ENST00000369552 1851 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
C9orf40Q8IXQ3 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
C9orf40Q8IXQ3 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
C9orf40Q8IXQ3 AL079305.1-201ENST00000623159 3008 ntBASIC2.76□□□□□ -1.97
C9orf40Q8IXQ3 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC2.76□□□□□ -1.97
C9orf40Q8IXQ3 AL672167.1-206ENST00000356293 943 ntBASIC2.76□□□□□ -1.97
C9orf40Q8IXQ3 RABGGTB-202ENST00000370826 512 ntTSL 2 BASIC2.76□□□□□ -1.97
C9orf40Q8IXQ3 TRAJ32-201ENST00000390505 66 ntAPPRIS P1 BASIC2.76□□□□□ -1.97
C9orf40Q8IXQ3 AL136372.1-201ENST00000403060 228 ntBASIC2.76□□□□□ -1.97
C9orf40Q8IXQ3 AL031121.1-201ENST00000406553 254 ntBASIC2.76□□□□□ -1.97
C9orf40Q8IXQ3 RN7SKP266-201ENST00000410232 287 ntBASIC2.76□□□□□ -1.97
C9orf40Q8IXQ3 RNA5SP274-201ENST00000410484 108 ntBASIC2.76□□□□□ -1.97
C9orf40Q8IXQ3 AL391704.1-203ENST00000414903 462 ntTSL 3 BASIC2.76□□□□□ -1.97
C9orf40Q8IXQ3 AC011233.1-201ENST00000422812 283 ntBASIC2.76□□□□□ -1.97
C9orf40Q8IXQ3 RPL35AP12-201ENST00000425362 338 ntBASIC2.76□□□□□ -1.97
C9orf40Q8IXQ3 AC003084.1-201ENST00000427030 435 ntTSL 5 BASIC2.76□□□□□ -1.97
C9orf40Q8IXQ3 UBE2FP3-201ENST00000436366 524 ntBASIC2.76□□□□□ -1.97
C9orf40Q8IXQ3 RABEPKP1-201ENST00000440529 1026 ntBASIC2.76□□□□□ -1.97
C9orf40Q8IXQ3 NANOGNBP1-201ENST00000448444 480 ntBASIC2.76□□□□□ -1.97
C9orf40Q8IXQ3 OR6C5P-201ENST00000452388 923 ntBASIC2.76□□□□□ -1.97
C9orf40Q8IXQ3 LINC01546-201ENST00000457435 674 ntTSL 2 BASIC2.76□□□□□ -1.97
C9orf40Q8IXQ3 AL139824.2-201ENST00000458731 1095 ntBASIC2.76□□□□□ -1.97
C9orf40Q8IXQ3 SNORD121B-201ENST00000458838 81 ntBASIC2.76□□□□□ -1.97
C9orf40Q8IXQ3 AC092059.1-201ENST00000485347 429 ntTSL 3 BASIC2.76□□□□□ -1.97
C9orf40Q8IXQ3 RPL7P23-201ENST00000493874 747 ntBASIC2.76□□□□□ -1.97
C9orf40Q8IXQ3 AC097478.1-204ENST00000509723 547 ntTSL 3 BASIC2.76□□□□□ -1.97
C9orf40Q8IXQ3 LTV1P1-201ENST00000510683 1237 ntBASIC2.76□□□□□ -1.97
C9orf40Q8IXQ3 AC093534.2-201ENST00000511418 420 ntTSL 3 BASIC2.76□□□□□ -1.97
C9orf40Q8IXQ3 AC105914.1-201ENST00000511798 226 ntBASIC2.76□□□□□ -1.97
C9orf40Q8IXQ3 AC005150.1-201ENST00000512831 628 ntTSL 2 BASIC2.76□□□□□ -1.97
C9orf40Q8IXQ3 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC2.76□□□□□ -1.97
C9orf40Q8IXQ3 NDST1-AS1-201ENST00000519040 368 ntTSL 2 BASIC2.76□□□□□ -1.97
C9orf40Q8IXQ3 AC109466.1-211ENST00000519327 496 ntTSL 3 BASIC2.76□□□□□ -1.97
C9orf40Q8IXQ3 AC009435.1-201ENST00000519555 574 ntTSL 4 BASIC2.76□□□□□ -1.97
C9orf40Q8IXQ3 PIGY-201ENST00000527353 217 ntAPPRIS P1 BASIC2.76□□□□□ -1.97
C9orf40Q8IXQ3 AHI1-212ENST00000528103 441 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
C9orf40Q8IXQ3 AC107882.1-201ENST00000530837 477 ntTSL 3 BASIC2.76□□□□□ -1.97
C9orf40Q8IXQ3 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
C9orf40Q8IXQ3 AL450442.1-201ENST00000554042 854 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
C9orf40Q8IXQ3 AC023824.4-201ENST00000562572 476 ntTSL 3 BASIC2.76□□□□□ -1.97
C9orf40Q8IXQ3 LINC01893-201ENST00000581750 479 ntTSL 3 BASIC2.76□□□□□ -1.97
C9orf40Q8IXQ3 BDH2P1-201ENST00000602288 736 ntBASIC2.76□□□□□ -1.97
C9orf40Q8IXQ3 AC021171.1-201ENST00000603137 706 ntBASIC2.76□□□□□ -1.97
C9orf40Q8IXQ3 AL353778.1-201ENST00000603149 408 ntBASIC2.76□□□□□ -1.97
C9orf40Q8IXQ3 AC013444.2-201ENST00000603317 787 ntBASIC2.76□□□□□ -1.97
C9orf40Q8IXQ3 AP000811.1-201ENST00000603803 651 ntBASIC2.76□□□□□ -1.97
C9orf40Q8IXQ3 AC106791.2-201ENST00000604680 391 ntBASIC2.76□□□□□ -1.97
C9orf40Q8IXQ3 AC018714.1-201ENST00000605028 208 ntBASIC2.76□□□□□ -1.97
C9orf40Q8IXQ3 AC012443.1-201ENST00000605605 231 ntBASIC2.76□□□□□ -1.97
C9orf40Q8IXQ3 AC106028.5-201ENST00000610332 395 ntBASIC2.76□□□□□ -1.97
C9orf40Q8IXQ3 ST7-OT4_4.1-201ENST00000614993 213 ntBASIC2.76□□□□□ -1.97
C9orf40Q8IXQ3 AL031667.3-201ENST00000620124 655 ntBASIC2.76□□□□□ -1.97
C9orf40Q8IXQ3 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC2.76□□□□□ -1.97
C9orf40Q8IXQ3 SLAIN1-203ENST00000351546 2394 ntTSL 2 BASIC2.76□□□□□ -1.97
C9orf40Q8IXQ3 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC2.76□□□□□ -1.97
C9orf40Q8IXQ3 AC093831.2-201ENST00000624393 3427 ntBASIC2.75□□□□□ -1.97
C9orf40Q8IXQ3 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC2.75□□□□□ -1.97
C9orf40Q8IXQ3 MTND5P7-201ENST00000413558 1798 ntBASIC2.75□□□□□ -1.97
C9orf40Q8IXQ3 RNF128-202ENST00000324342 2654 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
C9orf40Q8IXQ3 GNG5P1-201ENST00000255500 204 ntBASIC2.75□□□□□ -1.97
C9orf40Q8IXQ3 PMCH-201ENST00000329406 766 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
C9orf40Q8IXQ3 Y_RNA.302-201ENST00000364997 102 ntBASIC2.75□□□□□ -1.97
C9orf40Q8IXQ3 SNORA44-201ENST00000384584 132 ntBASIC2.75□□□□□ -1.97
C9orf40Q8IXQ3 MTCO1P17-201ENST00000411522 491 ntBASIC2.75□□□□□ -1.97
C9orf40Q8IXQ3 RPS15AP38-201ENST00000413110 372 ntBASIC2.75□□□□□ -1.97
C9orf40Q8IXQ3 RBM6-203ENST00000421682 684 ntTSL 2 BASIC2.75□□□□□ -1.97
C9orf40Q8IXQ3 AL593851.1-201ENST00000426171 157 ntBASIC2.75□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 220.7 ms