Protein–RNA interactions for Protein: Q6P9A3

ZNF549, Zinc finger protein 549, humanhuman

Predictions only

Length 640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF549Q6P9A3 Y_RNA.86-201ENST00000363020 111 ntBASIC3.66□□□□□ -1.82
ZNF549Q6P9A3 RNU6-283P-201ENST00000364788 107 ntBASIC3.66□□□□□ -1.82
ZNF549Q6P9A3 RNA5SP479-201ENST00000364858 117 ntBASIC3.66□□□□□ -1.82
ZNF549Q6P9A3 GTSF1L-201ENST00000373003 835 ntAPPRIS P3 BASIC3.66□□□□□ -1.82
ZNF549Q6P9A3 GTSF1L-202ENST00000373005 459 ntAPPRIS ALT2 TSL 3 BASIC3.66□□□□□ -1.82
ZNF549Q6P9A3 FGFR1OP2P1-201ENST00000395943 500 ntBASIC3.66□□□□□ -1.82
ZNF549Q6P9A3 RPL31P1-201ENST00000398116 372 ntBASIC3.66□□□□□ -1.82
ZNF549Q6P9A3 AL391417.1-201ENST00000404100 426 ntBASIC3.66□□□□□ -1.82
ZNF549Q6P9A3 EEF1A1P40-201ENST00000412883 573 ntBASIC3.66□□□□□ -1.82
ZNF549Q6P9A3 AC093865.1-201ENST00000415387 433 ntTSL 3 BASIC3.66□□□□□ -1.82
ZNF549Q6P9A3 MTATP6P18-201ENST00000417994 673 ntBASIC3.66□□□□□ -1.82
ZNF549Q6P9A3 AC019097.1-201ENST00000424783 735 ntBASIC3.66□□□□□ -1.82
ZNF549Q6P9A3 AL031736.2-201ENST00000426573 787 ntBASIC3.66□□□□□ -1.82
ZNF549Q6P9A3 AC008850.1-201ENST00000427546 362 ntBASIC3.66□□□□□ -1.82
ZNF549Q6P9A3 AC002465.1-201ENST00000436097 349 ntTSL 2 BASIC3.66□□□□□ -1.82
ZNF549Q6P9A3 LINC00113-203ENST00000442550 572 ntTSL 3 BASIC3.66□□□□□ -1.82
ZNF549Q6P9A3 RPS26P56-201ENST00000444468 240 ntBASIC3.66□□□□□ -1.82
ZNF549Q6P9A3 AL118496.2-201ENST00000448300 230 ntBASIC3.66□□□□□ -1.82
ZNF549Q6P9A3 AC104073.1-201ENST00000451988 151 ntBASIC3.66□□□□□ -1.82
ZNF549Q6P9A3 NANOGP10-201ENST00000453325 895 ntBASIC3.66□□□□□ -1.82
ZNF549Q6P9A3 AL034345.2-203ENST00000453417 383 ntTSL 3 BASIC3.66□□□□□ -1.82
ZNF549Q6P9A3 RPS20P21-201ENST00000466859 343 ntBASIC3.66□□□□□ -1.82
ZNF549Q6P9A3 AL136126.1-201ENST00000473603 402 ntBASIC3.66□□□□□ -1.82
ZNF549Q6P9A3 AC104563.1-201ENST00000476147 376 ntBASIC3.66□□□□□ -1.82
ZNF549Q6P9A3 AP001025.2-201ENST00000490908 477 ntBASIC3.66□□□□□ -1.82
ZNF549Q6P9A3 AC034222.1-201ENST00000494052 532 ntBASIC3.66□□□□□ -1.82
ZNF549Q6P9A3 AC005726.1-201ENST00000494679 427 ntBASIC3.66□□□□□ -1.82
ZNF549Q6P9A3 AL139099.1-201ENST00000497398 403 ntBASIC3.66□□□□□ -1.82
ZNF549Q6P9A3 AC011396.1-201ENST00000507391 312 ntTSL 3 BASIC3.66□□□□□ -1.82
ZNF549Q6P9A3 AC108037.1-201ENST00000514103 423 ntTSL 3 BASIC3.66□□□□□ -1.82
ZNF549Q6P9A3 AC093677.1-201ENST00000514414 678 ntBASIC3.66□□□□□ -1.82
ZNF549Q6P9A3 PCAT4-202ENST00000514836 373 ntTSL 3 BASIC3.66□□□□□ -1.82
ZNF549Q6P9A3 AC100782.1-201ENST00000520778 590 ntTSL 3 BASIC3.66□□□□□ -1.82
ZNF549Q6P9A3 AC022790.1-201ENST00000522872 204 ntBASIC3.66□□□□□ -1.82
ZNF549Q6P9A3 AC105031.3-201ENST00000524359 616 ntTSL 3 BASIC3.66□□□□□ -1.82
ZNF549Q6P9A3 AP003072.2-201ENST00000527756 676 ntBASIC3.66□□□□□ -1.82
ZNF549Q6P9A3 AP003498.1-201ENST00000532530 347 ntTSL 3 BASIC3.66□□□□□ -1.82
ZNF549Q6P9A3 AC009511.1-201ENST00000543527 191 ntTSL 5 BASIC3.66□□□□□ -1.82
ZNF549Q6P9A3 AC007424.1-203ENST00000554613 687 ntBASIC3.66□□□□□ -1.82
ZNF549Q6P9A3 BNIP3P5-201ENST00000562290 498 ntBASIC3.66□□□□□ -1.82
ZNF549Q6P9A3 RPS3AP23-202ENST00000574601 686 ntBASIC3.66□□□□□ -1.82
ZNF549Q6P9A3 MIR4286-201ENST00000580651 93 ntBASIC3.66□□□□□ -1.82
ZNF549Q6P9A3 AC025449.1-201ENST00000603896 529 ntBASIC3.66□□□□□ -1.82
ZNF549Q6P9A3 AC011468.4-201ENST00000603942 409 ntBASIC3.66□□□□□ -1.82
ZNF549Q6P9A3 AC005034.5-201ENST00000604219 466 ntBASIC3.66□□□□□ -1.82
ZNF549Q6P9A3 CEP164P1-207ENST00000608660 504 ntTSL 5 BASIC3.66□□□□□ -1.82
ZNF549Q6P9A3 LINC00649-214ENST00000609132 668 ntTSL 5 BASIC3.66□□□□□ -1.82
ZNF549Q6P9A3 OR10AB1P-201ENST00000609613 938 ntBASIC3.66□□□□□ -1.82
ZNF549Q6P9A3 AL138686.1-201ENST00000612699 315 ntTSL 3 BASIC3.66□□□□□ -1.82
ZNF549Q6P9A3 AL354696.2-202ENST00000620300 613 ntTSL 2 BASIC3.66□□□□□ -1.82
ZNF549Q6P9A3 AC010149.2-201ENST00000637608 315 ntBASIC3.66□□□□□ -1.82
ZNF549Q6P9A3 OR5T1-201ENST00000641368 1118 ntAPPRIS P1 BASIC3.66□□□□□ -1.82
ZNF549Q6P9A3 AC130650.2-201ENST00000618736 2403 ntBASIC3.66□□□□□ -1.82
ZNF549Q6P9A3 SLC30A6-204ENST00000406369 4589 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
ZNF549Q6P9A3 CD36-221ENST00000534394 1741 ntTSL 2 BASIC3.66□□□□□ -1.82
ZNF549Q6P9A3 CCDC121-201ENST00000324364 2342 ntAPPRIS P3 TSL 1 (best) BASIC3.66□□□□□ -1.82
ZNF549Q6P9A3 NMD3P1-201ENST00000439704 1488 ntBASIC3.66□□□□□ -1.82
ZNF549Q6P9A3 MTND5P33-201ENST00000571250 1450 ntBASIC3.66□□□□□ -1.82
ZNF549Q6P9A3 SCOC-202ENST00000394201 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC3.66□□□□□ -1.82
ZNF549Q6P9A3 GPR34-202ENST00000378142 1928 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
ZNF549Q6P9A3 PPIP5K2-215ENST00000613674 4933 ntAPPRIS ALT2 TSL 2 BASIC3.66□□□□□ -1.82
ZNF549Q6P9A3 RAD17-202ENST00000305138 3164 ntTSL 1 (best) BASIC3.65□□□□□ -1.82
ZNF549Q6P9A3 TNNI3K-201ENST00000326637 3001 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.82
ZNF549Q6P9A3 AC092447.10-201ENST00000620607 1652 ntBASIC3.65□□□□□ -1.82
ZNF549Q6P9A3 UGT2B7-201ENST00000305231 1887 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.82
ZNF549Q6P9A3 SLC38A2-209ENST00000551374 2802 ntTSL 2 BASIC3.65□□□□□ -1.82
ZNF549Q6P9A3 SLC25A46-206ENST00000509432 1596 ntTSL 2 BASIC3.65□□□□□ -1.82
ZNF549Q6P9A3 AC025164.2-202ENST00000499685 5699 ntTSL 3 BASIC3.65□□□□□ -1.82
ZNF549Q6P9A3 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC3.65□□□□□ -1.83
ZNF549Q6P9A3 OR8D1-201ENST00000357821 1026 ntAPPRIS P1 BASIC3.65□□□□□ -1.83
ZNF549Q6P9A3 MT-ND4L-201ENST00000361335 297 ntAPPRIS P1 BASIC3.65□□□□□ -1.83
ZNF549Q6P9A3 RNU6-853P-201ENST00000364306 107 ntBASIC3.65□□□□□ -1.83
ZNF549Q6P9A3 RNU6-169P-201ENST00000365336 107 ntBASIC3.65□□□□□ -1.83
ZNF549Q6P9A3 RNU6-116P-201ENST00000384042 109 ntBASIC3.65□□□□□ -1.83
ZNF549Q6P9A3 RNU6-1158P-201ENST00000391167 107 ntBASIC3.65□□□□□ -1.83
ZNF549Q6P9A3 AL024474.1-201ENST00000404655 591 ntBASIC3.65□□□□□ -1.83
ZNF549Q6P9A3 RHEBP3-201ENST00000411920 351 ntBASIC3.65□□□□□ -1.83
ZNF549Q6P9A3 OR9R1P-201ENST00000412200 877 ntBASIC3.65□□□□□ -1.83
ZNF549Q6P9A3 AL078590.1-201ENST00000412602 479 ntTSL 3 BASIC3.65□□□□□ -1.83
ZNF549Q6P9A3 PDCL2P1-201ENST00000419302 352 ntBASIC3.65□□□□□ -1.83
ZNF549Q6P9A3 AC092832.1-201ENST00000422934 400 ntBASIC3.65□□□□□ -1.83
ZNF549Q6P9A3 RPL30P3-201ENST00000424262 333 ntBASIC3.65□□□□□ -1.83
ZNF549Q6P9A3 AL513185.2-201ENST00000425543 193 ntBASIC3.65□□□□□ -1.83
ZNF549Q6P9A3 AC107081.2-201ENST00000425779 802 ntTSL 5 BASIC3.65□□□□□ -1.83
ZNF549Q6P9A3 SNRPGP6-201ENST00000451124 220 ntBASIC3.65□□□□□ -1.83
ZNF549Q6P9A3 NDUFAF4P3-201ENST00000456468 525 ntBASIC3.65□□□□□ -1.83
ZNF549Q6P9A3 LINC01036-201ENST00000458683 858 ntTSL 3 BASIC3.65□□□□□ -1.83
ZNF549Q6P9A3 RPS20P20-201ENST00000460498 340 ntBASIC3.65□□□□□ -1.83
ZNF549Q6P9A3 AL133162.1-201ENST00000463228 453 ntBASIC3.65□□□□□ -1.83
ZNF549Q6P9A3 RPL30P11-201ENST00000495304 339 ntBASIC3.65□□□□□ -1.83
ZNF549Q6P9A3 FGF7P4-201ENST00000509595 295 ntBASIC3.65□□□□□ -1.83
ZNF549Q6P9A3 LINC02365-202ENST00000520280 607 ntTSL 3 BASIC3.65□□□□□ -1.83
ZNF549Q6P9A3 HOMER1-205ENST00000535690 642 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
ZNF549Q6P9A3 AC073530.1-201ENST00000535917 775 ntTSL 5 BASIC3.65□□□□□ -1.83
ZNF549Q6P9A3 AC007368.1-201ENST00000536422 974 ntTSL 5 BASIC3.65□□□□□ -1.83
ZNF549Q6P9A3 ARL2BPP2-201ENST00000550907 489 ntBASIC3.65□□□□□ -1.83
ZNF549Q6P9A3 ARL1-211ENST00000551828 776 ntTSL 5 BASIC3.65□□□□□ -1.83
ZNF549Q6P9A3 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC3.65□□□□□ -1.83
ZNF549Q6P9A3 LINC01290-201ENST00000566787 502 ntTSL 2 BASIC3.65□□□□□ -1.83
ZNF549Q6P9A3 AC055876.1-202ENST00000567053 138 ntBASIC3.65□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 83.5 ms