Protein–RNA interactions for Protein: Q5TC82

RC3H1, Roquin-1, humanhuman

Known RBP Predictions only

Length 1,133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1Q5TC82 MFAP3L-206ENST00000506110 548 ntTSL 3 BASIC6.22□□□□□ -1.41
RC3H1Q5TC82 WWC2-AS1-201ENST00000511846 404 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
RC3H1Q5TC82 LEF1-218ENST00000512172 598 ntTSL 2 BASIC6.22□□□□□ -1.41
RC3H1Q5TC82 AC087441.2-201ENST00000529141 262 ntBASIC6.22□□□□□ -1.41
RC3H1Q5TC82 DIAPH2-AS1-203ENST00000542084 450 ntTSL 5 BASIC6.22□□□□□ -1.41
RC3H1Q5TC82 AC073525.1-201ENST00000549762 543 ntTSL 3 BASIC6.22□□□□□ -1.41
RC3H1Q5TC82 AC025423.5-201ENST00000550230 219 ntBASIC6.22□□□□□ -1.41
RC3H1Q5TC82 PSMD5-AS1-203ENST00000589026 525 ntTSL 5 BASIC6.22□□□□□ -1.41
RC3H1Q5TC82 AC011518.1-202ENST00000592668 407 ntTSL 5 BASIC6.22□□□□□ -1.41
RC3H1Q5TC82 C9orf72-203ENST00000380003 3200 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
RC3H1Q5TC82 MECOM-201ENST00000264674 4900 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
RC3H1Q5TC82 OR52E5-201ENST00000610445 2244 ntAPPRIS P1 BASIC6.22□□□□□ -1.41
RC3H1Q5TC82 APAF1-205ENST00000547045 3744 ntAPPRIS ALT1 TSL 1 (best) BASIC6.22□□□□□ -1.41
RC3H1Q5TC82 CCNB3-201ENST00000276014 4513 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
RC3H1Q5TC82 AC138907.8-201ENST00000623981 2256 ntBASIC6.22□□□□□ -1.41
RC3H1Q5TC82 FAM196B-201ENST00000377365 2999 ntAPPRIS P1 TSL 2 BASIC6.21□□□□□ -1.41
RC3H1Q5TC82 ERVFRD-3-201ENST00000578561 1617 ntBASIC6.21□□□□□ -1.41
RC3H1Q5TC82 NCOA7-208ENST00000438495 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC6.21□□□□□ -1.41
RC3H1Q5TC82 PCDH15-201ENST00000320301 6845 ntTSL 1 (best) BASIC6.21□□□□□ -1.41
RC3H1Q5TC82 TNFSF4-202ENST00000367718 3429 ntTSL 1 (best) BASIC6.21□□□□□ -1.41
RC3H1Q5TC82 SLMAP-206ENST00000428312 4132 ntTSL 1 (best) BASIC6.21□□□□□ -1.41
RC3H1Q5TC82 PARP11-201ENST00000228820 4424 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.41
RC3H1Q5TC82 AC133552.1-201ENST00000569988 4007 ntBASIC6.21□□□□□ -1.42
RC3H1Q5TC82 RYR3-208ENST00000622037 15564 ntAPPRIS ALT2 TSL 5 BASIC6.21□□□□□ -1.42
RC3H1Q5TC82 TAS2R3-201ENST00000247879 1101 ntAPPRIS P1 BASIC6.21□□□□□ -1.42
RC3H1Q5TC82 Y_RNA.170-201ENST00000363746 110 ntBASIC6.21□□□□□ -1.42
RC3H1Q5TC82 SNORD50.2-201ENST00000365465 70 ntBASIC6.21□□□□□ -1.42
RC3H1Q5TC82 RNU6-225P-201ENST00000384613 103 ntBASIC6.21□□□□□ -1.42
RC3H1Q5TC82 MIR517A-201ENST00000385001 87 ntBASIC6.21□□□□□ -1.42
RC3H1Q5TC82 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC6.21□□□□□ -1.42
RC3H1Q5TC82 AL357515.1-201ENST00000402967 542 ntBASIC6.21□□□□□ -1.42
RC3H1Q5TC82 MRPL35P1-201ENST00000404272 572 ntBASIC6.21□□□□□ -1.42
RC3H1Q5TC82 AL645608.4-201ENST00000423619 154 ntBASIC6.21□□□□□ -1.42
RC3H1Q5TC82 TMEM212-AS1-201ENST00000449106 427 ntTSL 3 BASIC6.21□□□□□ -1.42
RC3H1Q5TC82 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC6.21□□□□□ -1.42
RC3H1Q5TC82 SNORD121B-201ENST00000458838 81 ntBASIC6.21□□□□□ -1.42
RC3H1Q5TC82 snoU13.29-201ENST00000459370 104 ntBASIC6.21□□□□□ -1.42
RC3H1Q5TC82 AC114316.1-201ENST00000511323 278 ntTSL 5 BASIC6.21□□□□□ -1.42
RC3H1Q5TC82 AC092436.3-201ENST00000511788 257 ntBASIC6.21□□□□□ -1.42
RC3H1Q5TC82 RNU6-1278P-201ENST00000516130 107 ntBASIC6.21□□□□□ -1.42
RC3H1Q5TC82 AC011363.1-201ENST00000524198 458 ntTSL 5 BASIC6.21□□□□□ -1.42
RC3H1Q5TC82 AP002392.1-201ENST00000537692 208 ntBASIC6.21□□□□□ -1.42
RC3H1Q5TC82 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC6.21□□□□□ -1.42
RC3H1Q5TC82 AC015908.2-202ENST00000585243 756 ntTSL 3 BASIC6.21□□□□□ -1.42
RC3H1Q5TC82 AC008162.1-201ENST00000604718 254 ntBASIC6.21□□□□□ -1.42
RC3H1Q5TC82 AL670379.4-201ENST00000605279 254 ntBASIC6.21□□□□□ -1.42
RC3H1Q5TC82 AL359547.2-201ENST00000615810 418 ntBASIC6.21□□□□□ -1.42
RC3H1Q5TC82 AC019206.1-201ENST00000621938 425 ntBASIC6.21□□□□□ -1.42
RC3H1Q5TC82 AC068724.3-201ENST00000625906 87 ntBASIC6.21□□□□□ -1.42
RC3H1Q5TC82 AC130650.2-201ENST00000618736 2403 ntBASIC6.21□□□□□ -1.42
RC3H1Q5TC82 AP005435.3-201ENST00000531260 3198 ntBASIC6.21□□□□□ -1.42
RC3H1Q5TC82 PPFIBP1-201ENST00000228425 5933 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
RC3H1Q5TC82 TIPARP-205ENST00000486483 2150 ntAPPRIS P1 TSL 5 BASIC6.21□□□□□ -1.42
RC3H1Q5TC82 AC027228.2-201ENST00000567141 2154 ntBASIC6.21□□□□□ -1.42
RC3H1Q5TC82 FBXO3-208ENST00000530401 7410 ntTSL 2 BASIC6.21□□□□□ -1.42
RC3H1Q5TC82 PIAS2-204ENST00000585916 11075 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
RC3H1Q5TC82 NELL2-205ENST00000452445 3196 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
RC3H1Q5TC82 GAPT-201ENST00000318469 2119 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
RC3H1Q5TC82 OR4F5-202ENST00000641515 2618 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
RC3H1Q5TC82 DYNC1I2-225ENST00000508530 2494 ntAPPRIS ALT1 TSL 1 (best) BASIC6.2□□□□□ -1.42
RC3H1Q5TC82 GPATCH11-201ENST00000281932 3570 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
RC3H1Q5TC82 RRP15-201ENST00000366932 7771 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
RC3H1Q5TC82 AFF2-201ENST00000286437 12280 ntTSL 2 BASIC6.2□□□□□ -1.42
RC3H1Q5TC82 BANF2-202ENST00000377805 444 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
RC3H1Q5TC82 RNY1P5-201ENST00000383890 115 ntBASIC6.2□□□□□ -1.42
RC3H1Q5TC82 RNU2-20P-201ENST00000410425 191 ntBASIC6.2□□□□□ -1.42
RC3H1Q5TC82 RPEP3-201ENST00000425462 676 ntBASIC6.2□□□□□ -1.42
RC3H1Q5TC82 AL449043.1-202ENST00000427318 582 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
RC3H1Q5TC82 AC093106.2-201ENST00000428212 385 ntBASIC6.2□□□□□ -1.42
RC3H1Q5TC82 SLC36A1-202ENST00000429484 977 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
RC3H1Q5TC82 AC022022.1-201ENST00000430304 178 ntBASIC6.2□□□□□ -1.42
RC3H1Q5TC82 AC138761.5-201ENST00000433967 325 ntBASIC6.2□□□□□ -1.42
RC3H1Q5TC82 AL359706.1-201ENST00000437748 315 ntTSL 3 BASIC6.2□□□□□ -1.42
RC3H1Q5TC82 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC6.2□□□□□ -1.42
RC3H1Q5TC82 RNU7-187P-201ENST00000458985 68 ntBASIC6.2□□□□□ -1.42
RC3H1Q5TC82 RNU7-169P-201ENST00000459456 61 ntBASIC6.2□□□□□ -1.42
RC3H1Q5TC82 AP001086.1-201ENST00000494882 321 ntBASIC6.2□□□□□ -1.42
RC3H1Q5TC82 AC093767.1-201ENST00000504523 156 ntBASIC6.2□□□□□ -1.42
RC3H1Q5TC82 RNA5SP464-201ENST00000516251 108 ntBASIC6.2□□□□□ -1.42
RC3H1Q5TC82 RNU6-798P-201ENST00000516912 103 ntBASIC6.2□□□□□ -1.42
RC3H1Q5TC82 AP006587.4-201ENST00000526053 529 ntBASIC6.2□□□□□ -1.42
RC3H1Q5TC82 AC025884.1-201ENST00000556034 378 ntBASIC6.2□□□□□ -1.42
RC3H1Q5TC82 LINC02126-202ENST00000563754 750 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
RC3H1Q5TC82 RN7SL802P-201ENST00000577858 299 ntBASIC6.2□□□□□ -1.42
RC3H1Q5TC82 AP005380.1-201ENST00000584896 547 ntTSL 4 BASIC6.2□□□□□ -1.42
RC3H1Q5TC82 AC243829.4-202ENST00000610845 410 ntTSL 5 BASIC6.2□□□□□ -1.42
RC3H1Q5TC82 MAGI2-AS3-224ENST00000619135 205 ntTSL 5 BASIC6.2□□□□□ -1.42
RC3H1Q5TC82 AC021753.1-201ENST00000635724 168 ntBASIC6.2□□□□□ -1.42
RC3H1Q5TC82 N4BP2L2-204ENST00000399396 2872 ntTSL 5 BASIC6.2□□□□□ -1.42
RC3H1Q5TC82 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
RC3H1Q5TC82 MRPL35-202ENST00000337109 3727 ntAPPRIS P4 TSL 1 (best) BASIC6.2□□□□□ -1.42
RC3H1Q5TC82 ZNF493-202ENST00000355504 4386 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
RC3H1Q5TC82 SMG1P6-201ENST00000532337 2930 ntBASIC6.2□□□□□ -1.42
RC3H1Q5TC82 MAPK10-370ENST00000641943 4117 ntAPPRIS P2 BASIC6.2□□□□□ -1.42
RC3H1Q5TC82 AFTPH-204ENST00000409933 2811 ntAPPRIS ALT1 TSL 1 (best) BASIC6.2□□□□□ -1.42
RC3H1Q5TC82 NABP1-205ENST00000425611 1878 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
RC3H1Q5TC82 MINPP1-204ENST00000536010 2215 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
RC3H1Q5TC82 VPS50-202ENST00000305866 3613 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
RC3H1Q5TC82 RABL3-201ENST00000273375 3883 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
RC3H1Q5TC82 ALS2CR12-201ENST00000286190 1769 ntAPPRIS P3 TSL 1 (best) BASIC6.19□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 77.3 ms