Protein–RNA interactions for Protein: Q5SRH9

TTC39A, Tetratricopeptide repeat protein 39A, humanhuman

Predictions only

Length 613 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39AQ5SRH9 AC034234.1-202ENST00000508696 339 ntTSL 3 BASIC4.03□□□□□ -1.76
TTC39AQ5SRH9 AC024589.1-201ENST00000512207 263 ntBASIC4.03□□□□□ -1.76
TTC39AQ5SRH9 TRIQK-209ENST00000519969 555 ntAPPRIS P1 TSL 4 BASIC4.03□□□□□ -1.76
TTC39AQ5SRH9 AC022679.1-202ENST00000520251 376 ntTSL 3 BASIC4.03□□□□□ -1.76
TTC39AQ5SRH9 COX6CP8-201ENST00000522620 226 ntBASIC4.03□□□□□ -1.76
TTC39AQ5SRH9 AC022861.1-201ENST00000522981 663 ntBASIC4.03□□□□□ -1.76
TTC39AQ5SRH9 IL18-204ENST00000528832 795 ntAPPRIS P3 TSL 3 BASIC4.03□□□□□ -1.76
TTC39AQ5SRH9 TAS2R43-201ENST00000531678 1027 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
TTC39AQ5SRH9 AC068993.2-201ENST00000546563 395 ntTSL 5 BASIC4.03□□□□□ -1.76
TTC39AQ5SRH9 TGIF1P1-201ENST00000558095 802 ntBASIC4.03□□□□□ -1.76
TTC39AQ5SRH9 MIR3913-1-201ENST00000577744 102 ntBASIC4.03□□□□□ -1.76
TTC39AQ5SRH9 TTN-AS1-243ENST00000591867 748 ntTSL 5 BASIC4.03□□□□□ -1.76
TTC39AQ5SRH9 AC099566.1-211ENST00000595188 737 ntTSL 5 BASIC4.03□□□□□ -1.76
TTC39AQ5SRH9 BNIP3P8-201ENST00000597863 560 ntBASIC4.03□□□□□ -1.76
TTC39AQ5SRH9 RNASEH2B-AS1-206ENST00000601286 657 ntTSL 5 BASIC4.03□□□□□ -1.76
TTC39AQ5SRH9 AL161756.2-201ENST00000604597 246 ntBASIC4.03□□□□□ -1.76
TTC39AQ5SRH9 AC008250.2-201ENST00000615261 205 ntBASIC4.03□□□□□ -1.76
TTC39AQ5SRH9 AL160394.1-201ENST00000624765 724 ntBASIC4.03□□□□□ -1.76
TTC39AQ5SRH9 AL353651.2-201ENST00000635706 559 ntTSL 5 BASIC4.03□□□□□ -1.76
TTC39AQ5SRH9 TMEM67-202ENST00000409623 3255 ntTSL 2 BASIC4.03□□□□□ -1.76
TTC39AQ5SRH9 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC4.03□□□□□ -1.76
TTC39AQ5SRH9 FMN2-207ENST00000545751 1913 ntTSL 5 BASIC4.03□□□□□ -1.76
TTC39AQ5SRH9 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC4.03□□□□□ -1.76
TTC39AQ5SRH9 AC005832.2-201ENST00000538921 1430 ntBASIC4.03□□□□□ -1.76
TTC39AQ5SRH9 WDR49-201ENST00000308378 2594 ntAPPRIS P2 TSL 1 (best) BASIC4.03□□□□□ -1.77
TTC39AQ5SRH9 MCF2-210ENST00000536274 3461 ntAPPRIS ALT2 TSL 2 BASIC4.02□□□□□ -1.77
TTC39AQ5SRH9 Y_RNA.6-201ENST00000362350 114 ntBASIC4.02□□□□□ -1.77
TTC39AQ5SRH9 RNU6-259P-201ENST00000383999 107 ntBASIC4.02□□□□□ -1.77
TTC39AQ5SRH9 RPL31P1-201ENST00000398116 372 ntBASIC4.02□□□□□ -1.77
TTC39AQ5SRH9 AL357075.1-201ENST00000404107 726 ntBASIC4.02□□□□□ -1.77
TTC39AQ5SRH9 Y_RNA.598-201ENST00000410480 95 ntBASIC4.02□□□□□ -1.77
TTC39AQ5SRH9 RNU6-248P-201ENST00000410720 107 ntBASIC4.02□□□□□ -1.77
TTC39AQ5SRH9 FCF1P9-201ENST00000412546 282 ntBASIC4.02□□□□□ -1.77
TTC39AQ5SRH9 HMGB3P23-201ENST00000414981 585 ntBASIC4.02□□□□□ -1.77
TTC39AQ5SRH9 AC002456.1-201ENST00000415965 317 ntTSL 5 BASIC4.02□□□□□ -1.77
TTC39AQ5SRH9 RAD23BP2-201ENST00000416003 1207 ntBASIC4.02□□□□□ -1.77
TTC39AQ5SRH9 AL691426.1-201ENST00000416507 509 ntTSL 2 BASIC4.02□□□□□ -1.77
TTC39AQ5SRH9 RPS15AP40-201ENST00000419621 391 ntBASIC4.02□□□□□ -1.77
TTC39AQ5SRH9 AL353771.1-201ENST00000422107 457 ntTSL 3 BASIC4.02□□□□□ -1.77
TTC39AQ5SRH9 AL357375.1-201ENST00000424274 525 ntTSL 3 BASIC4.02□□□□□ -1.77
TTC39AQ5SRH9 AL512656.1-201ENST00000427492 401 ntTSL 2 BASIC4.02□□□□□ -1.77
TTC39AQ5SRH9 Z75741.1-201ENST00000446793 314 ntBASIC4.02□□□□□ -1.77
TTC39AQ5SRH9 LINC01069-201ENST00000452933 546 ntTSL 5 BASIC4.02□□□□□ -1.77
TTC39AQ5SRH9 AL033528.1-201ENST00000453780 140 ntBASIC4.02□□□□□ -1.77
TTC39AQ5SRH9 DCLRE1CP1-201ENST00000454630 470 ntBASIC4.02□□□□□ -1.77
TTC39AQ5SRH9 LINC01510-203ENST00000458082 626 ntTSL 3 BASIC4.02□□□□□ -1.77
TTC39AQ5SRH9 PABPC1P3-201ENST00000469174 459 ntBASIC4.02□□□□□ -1.77
TTC39AQ5SRH9 AC078785.3-201ENST00000476607 425 ntBASIC4.02□□□□□ -1.77
TTC39AQ5SRH9 AC002460.1-201ENST00000504394 370 ntTSL 3 BASIC4.02□□□□□ -1.77
TTC39AQ5SRH9 AC093767.1-201ENST00000504523 156 ntBASIC4.02□□□□□ -1.77
TTC39AQ5SRH9 AC110794.1-201ENST00000505816 425 ntBASIC4.02□□□□□ -1.77
TTC39AQ5SRH9 NDUFB4P2-201ENST00000509515 391 ntBASIC4.02□□□□□ -1.77
TTC39AQ5SRH9 CTD-2350J17.1-202ENST00000510456 360 ntTSL 2 BASIC4.02□□□□□ -1.77
TTC39AQ5SRH9 LINC02484-202ENST00000514877 546 ntTSL 3 BASIC4.02□□□□□ -1.77
TTC39AQ5SRH9 MIR2276-201ENST00000516886 89 ntBASIC4.02□□□□□ -1.77
TTC39AQ5SRH9 IGKV2-23-201ENST00000518729 323 ntBASIC4.02□□□□□ -1.77
TTC39AQ5SRH9 HSPA8P13-201ENST00000523715 472 ntBASIC4.02□□□□□ -1.77
TTC39AQ5SRH9 AC090857.2-201ENST00000526362 723 ntTSL 2 BASIC4.02□□□□□ -1.77
TTC39AQ5SRH9 HIGD1AP1-201ENST00000550979 275 ntBASIC4.02□□□□□ -1.77
TTC39AQ5SRH9 AC087883.1-201ENST00000551882 391 ntBASIC4.02□□□□□ -1.77
TTC39AQ5SRH9 AC099793.1-201ENST00000567538 285 ntTSL 3 BASIC4.02□□□□□ -1.77
TTC39AQ5SRH9 AC090616.5-202ENST00000582111 297 ntBASIC4.02□□□□□ -1.77
TTC39AQ5SRH9 MIR5195-201ENST00000583555 115 ntBASIC4.02□□□□□ -1.77
TTC39AQ5SRH9 ZNF28-207ENST00000594602 684 ntTSL 5 BASIC4.02□□□□□ -1.77
TTC39AQ5SRH9 AP001972.3-202ENST00000603012 375 ntTSL 3 BASIC4.02□□□□□ -1.77
TTC39AQ5SRH9 AC112191.3-201ENST00000604371 277 ntBASIC4.02□□□□□ -1.77
TTC39AQ5SRH9 AC073657.2-201ENST00000605661 303 ntBASIC4.02□□□□□ -1.77
TTC39AQ5SRH9 AC138749.5-201ENST00000611461 208 ntBASIC4.02□□□□□ -1.77
TTC39AQ5SRH9 AC131902.3-201ENST00000611767 581 ntBASIC4.02□□□□□ -1.77
TTC39AQ5SRH9 AL442067.2-201ENST00000614033 363 ntBASIC4.02□□□□□ -1.77
TTC39AQ5SRH9 AC116165.2-201ENST00000616705 206 ntBASIC4.02□□□□□ -1.77
TTC39AQ5SRH9 CYP3A51P-201ENST00000633513 256 ntBASIC4.02□□□□□ -1.77
TTC39AQ5SRH9 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC4.02□□□□□ -1.77
TTC39AQ5SRH9 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
TTC39AQ5SRH9 TRAPPC13-204ENST00000438419 1437 ntAPPRIS P4 TSL 1 (best) BASIC4.02□□□□□ -1.77
TTC39AQ5SRH9 FER-201ENST00000281092 12119 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
TTC39AQ5SRH9 AF127577.6-201ENST00000623352 2191 ntBASIC4.02□□□□□ -1.77
TTC39AQ5SRH9 MTRNR2L10-201ENST00000545075 1530 ntAPPRIS P1 BASIC4.01□□□□□ -1.77
TTC39AQ5SRH9 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC4.01□□□□□ -1.77
TTC39AQ5SRH9 PROS1-203ENST00000407433 3335 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
TTC39AQ5SRH9 ERBIN-212ENST00000508515 4374 ntTSL 5 BASIC4.01□□□□□ -1.77
TTC39AQ5SRH9 CRP-203ENST00000368111 512 ntTSL 3 BASIC4.01□□□□□ -1.77
TTC39AQ5SRH9 C6orf62-201ENST00000378102 741 ntTSL 5 BASIC4.01□□□□□ -1.77
TTC39AQ5SRH9 MIR1305-201ENST00000408300 86 ntBASIC4.01□□□□□ -1.77
TTC39AQ5SRH9 LINC00894-201ENST00000413076 403 ntTSL 3 BASIC4.01□□□□□ -1.77
TTC39AQ5SRH9 LINC00189-202ENST00000431661 308 ntTSL 5 BASIC4.01□□□□□ -1.77
TTC39AQ5SRH9 TCF7L1-IT1-201ENST00000433581 458 ntTSL 3 BASIC4.01□□□□□ -1.77
TTC39AQ5SRH9 RPL23AP74-201ENST00000437246 471 ntBASIC4.01□□□□□ -1.77
TTC39AQ5SRH9 LINC01307-201ENST00000439146 474 ntTSL 3 BASIC4.01□□□□□ -1.77
TTC39AQ5SRH9 RPS3AP12-201ENST00000443616 753 ntBASIC4.01□□□□□ -1.77
TTC39AQ5SRH9 RPL7P36-201ENST00000444633 681 ntBASIC4.01□□□□□ -1.77
TTC39AQ5SRH9 AP000542.1-201ENST00000448473 371 ntBASIC4.01□□□□□ -1.77
TTC39AQ5SRH9 MRPS31P2-201ENST00000451581 518 ntBASIC4.01□□□□□ -1.77
TTC39AQ5SRH9 AC098820.1-201ENST00000453157 512 ntTSL 2 BASIC4.01□□□□□ -1.77
TTC39AQ5SRH9 AC131571.1-202ENST00000454509 598 ntTSL 4 BASIC4.01□□□□□ -1.77
TTC39AQ5SRH9 Z82190.1-201ENST00000454534 490 ntBASIC4.01□□□□□ -1.77
TTC39AQ5SRH9 snoU13.24-201ENST00000458998 104 ntBASIC4.01□□□□□ -1.77
TTC39AQ5SRH9 AC092919.1-201ENST00000467896 229 ntTSL 2 BASIC4.01□□□□□ -1.77
TTC39AQ5SRH9 TIPARP-AS1-202ENST00000478005 554 ntTSL 4 BASIC4.01□□□□□ -1.77
TTC39AQ5SRH9 AC096577.1-203ENST00000506386 541 ntTSL 3 BASIC4.01□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 148.4 ms