Protein–RNA interactions for Protein: Q5SQN1

SNAP47, Synaptosomal-associated protein 47, humanhuman

Predictions only

Length 464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNAP47Q5SQN1 MED13-201ENST00000397786 10465 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
SNAP47Q5SQN1 LINC01187-201ENST00000506431 2314 ntTSL 5 BASIC4.89□□□□□ -1.63
SNAP47Q5SQN1 SAMSN1-206ENST00000619120 2028 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
SNAP47Q5SQN1 OR9G1-202ENST00000642097 3611 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
SNAP47Q5SQN1 ZBTB44-210ENST00000530205 2179 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
SNAP47Q5SQN1 SMAD5-212ENST00000545620 6937 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
SNAP47Q5SQN1 ABCB5-201ENST00000258738 2906 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
SNAP47Q5SQN1 SRRM1-203ENST00000447431 3691 ntAPPRIS ALT2 TSL 5 BASIC4.88□□□□□ -1.63
SNAP47Q5SQN1 KPNA2P1-201ENST00000458289 1591 ntBASIC4.88□□□□□ -1.63
SNAP47Q5SQN1 ARHGEF12-202ENST00000397843 9660 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
SNAP47Q5SQN1 WDR5B-201ENST00000330689 3720 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
SNAP47Q5SQN1 LINC01416-201ENST00000563553 2310 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
SNAP47Q5SQN1 PANK1-203ENST00000342512 2703 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
SNAP47Q5SQN1 CNGA1-209ENST00000544810 2722 ntAPPRIS ALT2 TSL 5 BASIC4.88□□□□□ -1.63
SNAP47Q5SQN1 CFAP126-201ENST00000367974 774 ntAPPRIS P1 TSL 2 BASIC4.88□□□□□ -1.63
SNAP47Q5SQN1 RNU6-639P-201ENST00000384074 107 ntBASIC4.88□□□□□ -1.63
SNAP47Q5SQN1 RNU6-310P-201ENST00000384655 107 ntBASIC4.88□□□□□ -1.63
SNAP47Q5SQN1 RNU6-308P-201ENST00000390957 107 ntBASIC4.88□□□□□ -1.63
SNAP47Q5SQN1 HSPE1P8-201ENST00000406997 288 ntBASIC4.88□□□□□ -1.63
SNAP47Q5SQN1 MIR1271-201ENST00000408537 86 ntBASIC4.88□□□□□ -1.63
SNAP47Q5SQN1 RPL7P37-201ENST00000425095 738 ntBASIC4.88□□□□□ -1.63
SNAP47Q5SQN1 MTCO1P39-201ENST00000426148 480 ntBASIC4.88□□□□□ -1.63
SNAP47Q5SQN1 KNOP1P3-201ENST00000446933 426 ntBASIC4.88□□□□□ -1.63
SNAP47Q5SQN1 H2AFZP5-201ENST00000446960 382 ntBASIC4.88□□□□□ -1.63
SNAP47Q5SQN1 RPL21P41-201ENST00000459863 264 ntBASIC4.88□□□□□ -1.63
SNAP47Q5SQN1 RPL37P6-201ENST00000460682 294 ntBASIC4.88□□□□□ -1.63
SNAP47Q5SQN1 COX7A2-205ENST00000460985 357 ntTSL 2 BASIC4.88□□□□□ -1.63
SNAP47Q5SQN1 AC091180.1-201ENST00000462104 372 ntBASIC4.88□□□□□ -1.63
SNAP47Q5SQN1 AC110792.1-201ENST00000491826 472 ntBASIC4.88□□□□□ -1.63
SNAP47Q5SQN1 OR7H2P-201ENST00000513483 306 ntBASIC4.88□□□□□ -1.63
SNAP47Q5SQN1 RNU6-1213P-201ENST00000517075 94 ntBASIC4.88□□□□□ -1.63
SNAP47Q5SQN1 AC027801.4-201ENST00000518420 395 ntTSL 5 BASIC4.88□□□□□ -1.63
SNAP47Q5SQN1 AC132219.1-201ENST00000524337 478 ntTSL 5 BASIC4.88□□□□□ -1.63
SNAP47Q5SQN1 AL355836.1-201ENST00000555951 870 ntBASIC4.88□□□□□ -1.63
SNAP47Q5SQN1 HMGB3P26-201ENST00000560051 582 ntBASIC4.88□□□□□ -1.63
SNAP47Q5SQN1 RN7SL652P-201ENST00000577769 300 ntBASIC4.88□□□□□ -1.63
SNAP47Q5SQN1 RN7SL290P-201ENST00000578661 300 ntBASIC4.88□□□□□ -1.63
SNAP47Q5SQN1 AC010618.3-202ENST00000598141 476 ntTSL 3 BASIC4.88□□□□□ -1.63
SNAP47Q5SQN1 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC4.88□□□□□ -1.63
SNAP47Q5SQN1 RMST_9.1-201ENST00000619945 193 ntBASIC4.88□□□□□ -1.63
SNAP47Q5SQN1 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC4.88□□□□□ -1.63
SNAP47Q5SQN1 PDE4D-205ENST00000360047 3122 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
SNAP47Q5SQN1 GPR85-201ENST00000297146 5079 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
SNAP47Q5SQN1 AC100778.3-201ENST00000580060 1750 ntBASIC4.88□□□□□ -1.63
SNAP47Q5SQN1 SRSF11-201ENST00000370949 3034 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
SNAP47Q5SQN1 DAZ4-207ENST00000634662 1832 ntAPPRIS ALT2 TSL 5 BASIC4.88□□□□□ -1.63
SNAP47Q5SQN1 OR10D3-203ENST00000641546 3566 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
SNAP47Q5SQN1 MAPK10-286ENST00000641208 8747 ntBASIC4.87□□□□□ -1.63
SNAP47Q5SQN1 MSTN-201ENST00000260950 2822 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
SNAP47Q5SQN1 DDX18P3-201ENST00000404856 2007 ntBASIC4.87□□□□□ -1.63
SNAP47Q5SQN1 C15orf41-212ENST00000567389 2618 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
SNAP47Q5SQN1 AGTR1-208ENST00000475347 1669 ntAPPRIS P1 TSL 3 BASIC4.87□□□□□ -1.63
SNAP47Q5SQN1 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC4.87□□□□□ -1.63
SNAP47Q5SQN1 IPO11-203ENST00000409534 1725 ntTSL 2 BASIC4.87□□□□□ -1.63
SNAP47Q5SQN1 FAM71D-211ENST00000612183 1790 ntAPPRIS P1 TSL 2 BASIC4.87□□□□□ -1.63
SNAP47Q5SQN1 MAPK10-263ENST00000641052 4307 ntBASIC4.87□□□□□ -1.63
SNAP47Q5SQN1 AC004057.1-202ENST00000356247 284 ntTSL 3 BASIC4.87□□□□□ -1.63
SNAP47Q5SQN1 Y_RNA.28-201ENST00000362554 111 ntBASIC4.87□□□□□ -1.63
SNAP47Q5SQN1 Y_RNA.112-201ENST00000363250 102 ntBASIC4.87□□□□□ -1.63
SNAP47Q5SQN1 OR1L6-202ENST00000373684 1044 ntBASIC4.87□□□□□ -1.63
SNAP47Q5SQN1 RNU6-629P-201ENST00000384061 103 ntBASIC4.87□□□□□ -1.63
SNAP47Q5SQN1 AC097374.1-203ENST00000400783 485 ntBASIC4.87□□□□□ -1.63
SNAP47Q5SQN1 Y_RNA.646-201ENST00000410980 101 ntBASIC4.87□□□□□ -1.63
SNAP47Q5SQN1 AF186996.5-201ENST00000418098 904 ntBASIC4.87□□□□□ -1.63
SNAP47Q5SQN1 AC244098.2-201ENST00000422068 99 ntBASIC4.87□□□□□ -1.63
SNAP47Q5SQN1 AL590632.1-201ENST00000424289 371 ntBASIC4.87□□□□□ -1.63
SNAP47Q5SQN1 NRBF2P3-201ENST00000432731 865 ntBASIC4.87□□□□□ -1.63
SNAP47Q5SQN1 AL137076.1-201ENST00000441046 551 ntTSL 2 BASIC4.87□□□□□ -1.63
SNAP47Q5SQN1 AC018359.1-201ENST00000442567 574 ntTSL 4 BASIC4.87□□□□□ -1.63
SNAP47Q5SQN1 FO393408.1-201ENST00000458577 582 ntTSL 5 BASIC4.87□□□□□ -1.63
SNAP47Q5SQN1 HSPE1P6-201ENST00000479457 291 ntBASIC4.87□□□□□ -1.63
SNAP47Q5SQN1 AC009901.1-201ENST00000506703 541 ntBASIC4.87□□□□□ -1.63
SNAP47Q5SQN1 AC121154.1-201ENST00000507299 430 ntTSL 3 BASIC4.87□□□□□ -1.63
SNAP47Q5SQN1 AC116337.1-201ENST00000509680 687 ntBASIC4.87□□□□□ -1.63
SNAP47Q5SQN1 RNA5SP464-201ENST00000516251 108 ntBASIC4.87□□□□□ -1.63
SNAP47Q5SQN1 RNA5SP43-201ENST00000516559 110 ntBASIC4.87□□□□□ -1.63
SNAP47Q5SQN1 AP004371.1-201ENST00000525240 214 ntBASIC4.87□□□□□ -1.63
SNAP47Q5SQN1 AL133166.1-202ENST00000550975 565 ntTSL 4 BASIC4.87□□□□□ -1.63
SNAP47Q5SQN1 AC063950.1-201ENST00000552036 308 ntBASIC4.87□□□□□ -1.63
SNAP47Q5SQN1 AC129510.2-201ENST00000582774 345 ntTSL 5 BASIC4.87□□□□□ -1.63
SNAP47Q5SQN1 HMGB2P1-201ENST00000591146 634 ntBASIC4.87□□□□□ -1.63
SNAP47Q5SQN1 AC012119.1-201ENST00000603184 222 ntBASIC4.87□□□□□ -1.63
SNAP47Q5SQN1 MIR4458HG-202ENST00000605918 1057 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
SNAP47Q5SQN1 DEC1-204ENST00000614246 210 ntAPPRIS ALT2 TSL 1 (best) BASIC4.87□□□□□ -1.63
SNAP47Q5SQN1 MIR6128-201ENST00000615528 109 ntBASIC4.87□□□□□ -1.63
SNAP47Q5SQN1 ATP5A1P2-202ENST00000616464 443 ntBASIC4.87□□□□□ -1.63
SNAP47Q5SQN1 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC4.87□□□□□ -1.63
SNAP47Q5SQN1 CEP295-206ENST00000531700 2890 ntAPPRIS ALT2 TSL 2 BASIC4.87□□□□□ -1.63
SNAP47Q5SQN1 RPS6KA5-207ENST00000614987 26795 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
SNAP47Q5SQN1 AC025031.4-201ENST00000621248 3271 ntBASIC4.87□□□□□ -1.63
SNAP47Q5SQN1 ATF7IP-209ENST00000536444 8774 ntAPPRIS ALT2 TSL 1 (best) BASIC4.87□□□□□ -1.63
SNAP47Q5SQN1 AC104118.1-201ENST00000607625 1589 ntBASIC4.87□□□□□ -1.63
SNAP47Q5SQN1 C12orf60-201ENST00000330828 1684 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
SNAP47Q5SQN1 MUC7-203ENST00000456088 2479 ntAPPRIS P2 TSL 4 BASIC4.86□□□□□ -1.63
SNAP47Q5SQN1 CTAGE5-210ENST00000553728 4392 ntAPPRIS ALT2 TSL 5 BASIC4.86□□□□□ -1.63
SNAP47Q5SQN1 TRBV21OR9-2-201ENST00000331828 367 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
SNAP47Q5SQN1 RNA5SP235-201ENST00000365411 114 ntBASIC4.86□□□□□ -1.63
SNAP47Q5SQN1 SCN1A-202ENST00000375405 8097 ntAPPRIS P3 TSL 5 BASIC4.86□□□□□ -1.63
SNAP47Q5SQN1 SNORA56-201ENST00000383966 129 ntBASIC4.86□□□□□ -1.63
SNAP47Q5SQN1 AL121834.1-202ENST00000404494 277 ntBASIC4.86□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 121.4 ms