Protein–RNA interactions for Protein: Q59EK9

RUNDC3A, RUN domain-containing protein 3A, humanhuman

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RUNDC3AQ59EK9 ITGA9-AS1-208ENST00000449586 726 ntTSL 3 BASIC3.66□□□□□ -1.82
RUNDC3AQ59EK9 AC006480.1-201ENST00000449887 378 ntBASIC3.66□□□□□ -1.82
RUNDC3AQ59EK9 AL645608.2-201ENST00000458555 471 ntTSL 2 BASIC3.66□□□□□ -1.82
RUNDC3AQ59EK9 SRRM1P2-201ENST00000464531 1192 ntBASIC3.66□□□□□ -1.82
RUNDC3AQ59EK9 ANKRD7-204ENST00000477532 744 ntTSL 5 BASIC3.66□□□□□ -1.82
RUNDC3AQ59EK9 AC084198.1-201ENST00000477747 402 ntBASIC3.66□□□□□ -1.82
RUNDC3AQ59EK9 HSPE1P6-201ENST00000479457 291 ntBASIC3.66□□□□□ -1.82
RUNDC3AQ59EK9 AC010273.2-201ENST00000479830 438 ntTSL 5 BASIC3.66□□□□□ -1.82
RUNDC3AQ59EK9 HMGB1P29-201ENST00000505659 499 ntBASIC3.66□□□□□ -1.82
RUNDC3AQ59EK9 AC010460.1-201ENST00000507087 466 ntBASIC3.66□□□□□ -1.82
RUNDC3AQ59EK9 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC3.66□□□□□ -1.82
RUNDC3AQ59EK9 SNORA31.9-201ENST00000516429 84 ntBASIC3.66□□□□□ -1.82
RUNDC3AQ59EK9 SCARNA24.1-201ENST00000516465 137 ntBASIC3.66□□□□□ -1.82
RUNDC3AQ59EK9 RN7SKP83-201ENST00000516512 178 ntBASIC3.66□□□□□ -1.82
RUNDC3AQ59EK9 RNU6-1231P-201ENST00000517185 103 ntBASIC3.66□□□□□ -1.82
RUNDC3AQ59EK9 RNA5SP179-201ENST00000517284 121 ntBASIC3.66□□□□□ -1.82
RUNDC3AQ59EK9 AC008415.1-201ENST00000522189 734 ntTSL 5 BASIC3.66□□□□□ -1.82
RUNDC3AQ59EK9 FAM60DP-201ENST00000524174 632 ntBASIC3.66□□□□□ -1.82
RUNDC3AQ59EK9 AC011979.2-201ENST00000527568 352 ntBASIC3.66□□□□□ -1.82
RUNDC3AQ59EK9 A2ML1-AS1-201ENST00000537288 452 ntTSL 3 BASIC3.66□□□□□ -1.82
RUNDC3AQ59EK9 MGST1-215ENST00000540056 546 ntTSL 3 BASIC3.66□□□□□ -1.82
RUNDC3AQ59EK9 OR4H12P-201ENST00000556269 907 ntBASIC3.66□□□□□ -1.82
RUNDC3AQ59EK9 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC3.66□□□□□ -1.82
RUNDC3AQ59EK9 AC006960.3-201ENST00000561845 705 ntBASIC3.66□□□□□ -1.82
RUNDC3AQ59EK9 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC3.66□□□□□ -1.82
RUNDC3AQ59EK9 AC010601.1-202ENST00000567304 547 ntTSL 4 BASIC3.66□□□□□ -1.82
RUNDC3AQ59EK9 NUFIP2-202ENST00000579665 559 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
RUNDC3AQ59EK9 AC011524.1-201ENST00000590167 240 ntTSL 3 BASIC3.66□□□□□ -1.82
RUNDC3AQ59EK9 IPO5P1-202ENST00000600039 287 ntBASIC3.66□□□□□ -1.82
RUNDC3AQ59EK9 BDH2P1-201ENST00000602288 736 ntBASIC3.66□□□□□ -1.82
RUNDC3AQ59EK9 DPY19L1-208ENST00000612226 607 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
RUNDC3AQ59EK9 Xist_exon1.1-201ENST00000618930 85 ntBASIC3.66□□□□□ -1.82
RUNDC3AQ59EK9 AC073172.1-201ENST00000636967 851 ntTSL 5 BASIC3.66□□□□□ -1.82
RUNDC3AQ59EK9 GALNT1-201ENST00000269195 3847 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
RUNDC3AQ59EK9 NT5C3A-202ENST00000381626 1909 ntAPPRIS ALT1 TSL 5 BASIC3.66□□□□□ -1.82
RUNDC3AQ59EK9 FAP-214ENST00000627638 2569 ntAPPRIS ALT1 TSL 5 BASIC3.65□□□□□ -1.82
RUNDC3AQ59EK9 TTC21B-AS1-201ENST00000440322 2260 ntTSL 4 BASIC3.65□□□□□ -1.82
RUNDC3AQ59EK9 C6orf10-203ENST00000442822 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC3.65□□□□□ -1.82
RUNDC3AQ59EK9 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.82
RUNDC3AQ59EK9 ZNF439-201ENST00000304030 2622 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.82
RUNDC3AQ59EK9 LTN1-207ENST00000614971 7756 ntTSL 1 (best) BASIC3.65□□□□□ -1.82
RUNDC3AQ59EK9 TDRD1-202ENST00000369280 4062 ntAPPRIS ALT2 TSL 5 BASIC3.65□□□□□ -1.82
RUNDC3AQ59EK9 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
RUNDC3AQ59EK9 RNU6-1284P-201ENST00000363701 100 ntBASIC3.65□□□□□ -1.83
RUNDC3AQ59EK9 RNU6-1103P-201ENST00000384150 107 ntBASIC3.65□□□□□ -1.83
RUNDC3AQ59EK9 RNU6-328P-201ENST00000390887 106 ntBASIC3.65□□□□□ -1.83
RUNDC3AQ59EK9 TXNP7-201ENST00000406296 293 ntBASIC3.65□□□□□ -1.83
RUNDC3AQ59EK9 LHFPL3-AS1-203ENST00000417290 950 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
RUNDC3AQ59EK9 AC023590.1-205ENST00000430457 676 ntTSL 3 BASIC3.65□□□□□ -1.83
RUNDC3AQ59EK9 IGKV1OR9-2-201ENST00000431378 277 ntBASIC3.65□□□□□ -1.83
RUNDC3AQ59EK9 AL139289.1-201ENST00000436713 731 ntTSL 3 BASIC3.65□□□□□ -1.83
RUNDC3AQ59EK9 AL139327.2-202ENST00000437057 400 ntTSL 3 BASIC3.65□□□□□ -1.83
RUNDC3AQ59EK9 AL392046.1-203ENST00000450106 651 ntTSL 2 BASIC3.65□□□□□ -1.83
RUNDC3AQ59EK9 AC093392.2-201ENST00000450682 337 ntBASIC3.65□□□□□ -1.83
RUNDC3AQ59EK9 SNRPGP6-201ENST00000451124 220 ntBASIC3.65□□□□□ -1.83
RUNDC3AQ59EK9 VN1R17P-201ENST00000472048 1090 ntBASIC3.65□□□□□ -1.83
RUNDC3AQ59EK9 AC092451.1-201ENST00000480211 153 ntBASIC3.65□□□□□ -1.83
RUNDC3AQ59EK9 THAP6-203ENST00000502620 582 ntTSL 3 BASIC3.65□□□□□ -1.83
RUNDC3AQ59EK9 AC108727.1-201ENST00000513802 393 ntTSL 2 BASIC3.65□□□□□ -1.83
RUNDC3AQ59EK9 AC093689.1-201ENST00000514737 246 ntTSL 5 BASIC3.65□□□□□ -1.83
RUNDC3AQ59EK9 SLIT2-IT1-201ENST00000515882 601 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
RUNDC3AQ59EK9 RN7SKP209-201ENST00000516888 304 ntBASIC3.65□□□□□ -1.83
RUNDC3AQ59EK9 RNU6-840P-201ENST00000517275 65 ntBASIC3.65□□□□□ -1.83
RUNDC3AQ59EK9 AC022360.2-201ENST00000522390 456 ntTSL 3 BASIC3.65□□□□□ -1.83
RUNDC3AQ59EK9 MS4A4E-204ENST00000526086 460 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
RUNDC3AQ59EK9 AP003072.2-201ENST00000527756 676 ntBASIC3.65□□□□□ -1.83
RUNDC3AQ59EK9 ALKBH3-AS1-202ENST00000527960 547 ntTSL 4 BASIC3.65□□□□□ -1.83
RUNDC3AQ59EK9 AC090023.1-201ENST00000545750 443 ntTSL 3 BASIC3.65□□□□□ -1.83
RUNDC3AQ59EK9 AC133480.1-201ENST00000547563 381 ntTSL 3 BASIC3.65□□□□□ -1.83
RUNDC3AQ59EK9 AC079598.1-201ENST00000548691 554 ntTSL 4 BASIC3.65□□□□□ -1.83
RUNDC3AQ59EK9 AC128657.1-201ENST00000549459 145 ntBASIC3.65□□□□□ -1.83
RUNDC3AQ59EK9 AC008056.1-201ENST00000553322 394 ntTSL 3 BASIC3.65□□□□□ -1.83
RUNDC3AQ59EK9 MIR3939-201ENST00000582614 106 ntBASIC3.65□□□□□ -1.83
RUNDC3AQ59EK9 GLUD1P4-201ENST00000590914 418 ntBASIC3.65□□□□□ -1.83
RUNDC3AQ59EK9 SLC14A2-AS1-203ENST00000592286 528 ntTSL 4 BASIC3.65□□□□□ -1.83
RUNDC3AQ59EK9 LINC00310-206ENST00000609947 892 ntTSL 5 BASIC3.65□□□□□ -1.83
RUNDC3AQ59EK9 AL592295.2-201ENST00000612578 206 ntBASIC3.65□□□□□ -1.83
RUNDC3AQ59EK9 AL158835.3-201ENST00000625908 565 ntTSL 5 BASIC3.65□□□□□ -1.83
RUNDC3AQ59EK9 MIR6830-201ENST00000636015 70 ntBASIC3.65□□□□□ -1.83
RUNDC3AQ59EK9 AC092442.1-201ENST00000636216 138 ntAPPRIS P1 TSL 5 BASIC3.65□□□□□ -1.83
RUNDC3AQ59EK9 OR5H6-203ENST00000642105 978 ntBASIC3.65□□□□□ -1.83
RUNDC3AQ59EK9 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC3.65□□□□□ -1.83
RUNDC3AQ59EK9 UBE2W-203ENST00000517608 8426 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
RUNDC3AQ59EK9 CAB39L-206ENST00000410043 1627 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
RUNDC3AQ59EK9 KCNIP4-207ENST00000509207 1301 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
RUNDC3AQ59EK9 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
RUNDC3AQ59EK9 CLIC2-202ENST00000369449 2655 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
RUNDC3AQ59EK9 SNCA-213ENST00000618500 3022 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
RUNDC3AQ59EK9 CCDC110-202ENST00000393540 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC3.64□□□□□ -1.83
RUNDC3AQ59EK9 AC138915.3-201ENST00000562908 1389 ntBASIC3.64□□□□□ -1.83
RUNDC3AQ59EK9 ZNF66-201ENST00000344519 1745 ntAPPRIS P1 TSL 3 BASIC3.64□□□□□ -1.83
RUNDC3AQ59EK9 NAIP-205ENST00000508426 4153 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
RUNDC3AQ59EK9 LGI1-210ENST00000629035 2251 ntTSL 5 BASIC3.64□□□□□ -1.83
RUNDC3AQ59EK9 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
RUNDC3AQ59EK9 LRFN5-204ENST00000554171 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC3.64□□□□□ -1.83
RUNDC3AQ59EK9 FLG-AS1-205ENST00000445097 2857 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
RUNDC3AQ59EK9 WNK3-205ENST00000620763 5400 ntTSL 5 BASIC3.64□□□□□ -1.83
RUNDC3AQ59EK9 HSPE1P11-201ENST00000339579 310 ntBASIC3.64□□□□□ -1.83
RUNDC3AQ59EK9 Y_RNA.22-201ENST00000362492 102 ntBASIC3.64□□□□□ -1.83
RUNDC3AQ59EK9 RNU5A-1-201ENST00000362698 116 ntBASIC3.64□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 122.2 ms