Protein–RNA interactions for Protein: Q53GD3

SLC44A4, Choline transporter-like protein 4, humanhuman

Predictions only

Length 710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A4Q53GD3 PATE1-202ENST00000437148 457 ntAPPRIS ALT2 TSL 1 (best) BASIC4.23□□□□□ -1.73
SLC44A4Q53GD3 AC097347.1-201ENST00000438499 517 ntTSL 3 BASIC4.23□□□□□ -1.73
SLC44A4Q53GD3 UBDP1-202ENST00000457888 382 ntBASIC4.23□□□□□ -1.73
SLC44A4Q53GD3 LINC01036-201ENST00000458683 858 ntTSL 3 BASIC4.23□□□□□ -1.73
SLC44A4Q53GD3 SIDT1-AS1-201ENST00000462180 465 ntTSL 3 BASIC4.23□□□□□ -1.73
SLC44A4Q53GD3 RPS3AP50-201ENST00000487064 803 ntBASIC4.23□□□□□ -1.73
SLC44A4Q53GD3 AC091951.2-201ENST00000500762 203 ntBASIC4.23□□□□□ -1.73
SLC44A4Q53GD3 AC093206.1-201ENST00000515364 497 ntTSL 3 BASIC4.23□□□□□ -1.73
SLC44A4Q53GD3 Vault.3-201ENST00000516676 95 ntBASIC4.23□□□□□ -1.73
SLC44A4Q53GD3 RNA5SP337-201ENST00000517007 109 ntBASIC4.23□□□□□ -1.73
SLC44A4Q53GD3 AC090151.1-201ENST00000520784 730 ntBASIC4.23□□□□□ -1.73
SLC44A4Q53GD3 FAM92A1P1-201ENST00000528023 890 ntBASIC4.23□□□□□ -1.73
SLC44A4Q53GD3 TIMM9-207ENST00000555930 448 ntTSL 3 BASIC4.23□□□□□ -1.73
SLC44A4Q53GD3 AC126407.1-201ENST00000563044 566 ntTSL 4 BASIC4.23□□□□□ -1.73
SLC44A4Q53GD3 MIR3167-201ENST00000579623 85 ntBASIC4.23□□□□□ -1.73
SLC44A4Q53GD3 COX6CP3-201ENST00000580869 223 ntBASIC4.23□□□□□ -1.73
SLC44A4Q53GD3 ZNF432-203ENST00000597273 624 ntTSL 2 BASIC4.23□□□□□ -1.73
SLC44A4Q53GD3 AC008946.1-201ENST00000599756 421 ntTSL 3 BASIC4.23□□□□□ -1.73
SLC44A4Q53GD3 AC012468.1-201ENST00000604888 430 ntBASIC4.23□□□□□ -1.73
SLC44A4Q53GD3 OR6R2P-201ENST00000609216 300 ntBASIC4.23□□□□□ -1.73
SLC44A4Q53GD3 SCOC-AS1-203ENST00000609616 405 ntTSL 3 BASIC4.23□□□□□ -1.73
SLC44A4Q53GD3 AL590491.2-201ENST00000614608 499 ntTSL 5 BASIC4.23□□□□□ -1.73
SLC44A4Q53GD3 AL359880.1-201ENST00000621879 266 ntBASIC4.23□□□□□ -1.73
SLC44A4Q53GD3 AL138713.1-201ENST00000624026 2130 ntBASIC4.23□□□□□ -1.73
SLC44A4Q53GD3 LINC02393-202ENST00000614177 1993 ntTSL 2 BASIC4.23□□□□□ -1.73
SLC44A4Q53GD3 PCDH15-203ENST00000373955 4230 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
SLC44A4Q53GD3 P2RY13-201ENST00000325602 2764 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
SLC44A4Q53GD3 UBE2D3-233ENST00000618836 3472 ntAPPRIS ALT1 TSL 5 BASIC4.23□□□□□ -1.73
SLC44A4Q53GD3 FAM169A-203ENST00000510496 5810 ntTSL 5 BASIC4.23□□□□□ -1.73
SLC44A4Q53GD3 ADAM5-201ENST00000359790 1663 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
SLC44A4Q53GD3 LINC02532-209ENST00000602934 2464 ntTSL 2 BASIC4.22□□□□□ -1.73
SLC44A4Q53GD3 MTCO1P9-201ENST00000505577 1534 ntBASIC4.22□□□□□ -1.73
SLC44A4Q53GD3 ABCD2-201ENST00000308666 6238 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
SLC44A4Q53GD3 PHC3-215ENST00000495893 12666 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
SLC44A4Q53GD3 DAZ4-206ENST00000449750 3271 ntTSL 5 BASIC4.22□□□□□ -1.73
SLC44A4Q53GD3 LGI1-210ENST00000629035 2251 ntTSL 5 BASIC4.22□□□□□ -1.73
SLC44A4Q53GD3 RNY3P13-201ENST00000365542 102 ntBASIC4.22□□□□□ -1.73
SLC44A4Q53GD3 Y_RNA.402-201ENST00000383972 102 ntBASIC4.22□□□□□ -1.73
SLC44A4Q53GD3 Y_RNA.409-201ENST00000383990 98 ntBASIC4.22□□□□□ -1.73
SLC44A4Q53GD3 TRAJ7-201ENST00000390530 59 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
SLC44A4Q53GD3 SNORD66.1-201ENST00000391230 76 ntBASIC4.22□□□□□ -1.73
SLC44A4Q53GD3 RNU2-8P-201ENST00000410727 190 ntBASIC4.22□□□□□ -1.73
SLC44A4Q53GD3 RNU4-55P-201ENST00000410731 137 ntBASIC4.22□□□□□ -1.73
SLC44A4Q53GD3 RNU2-41P-201ENST00000410991 178 ntBASIC4.22□□□□□ -1.73
SLC44A4Q53GD3 AL590378.1-201ENST00000426818 303 ntTSL 3 BASIC4.22□□□□□ -1.73
SLC44A4Q53GD3 AL022396.1-201ENST00000427011 386 ntTSL 3 BASIC4.22□□□□□ -1.73
SLC44A4Q53GD3 Z83839.2-201ENST00000436294 274 ntTSL 5 BASIC4.22□□□□□ -1.73
SLC44A4Q53GD3 AC092802.2-202ENST00000444665 371 ntTSL 5 BASIC4.22□□□□□ -1.73
SLC44A4Q53GD3 LINC01997-201ENST00000494900 429 ntTSL 2 BASIC4.22□□□□□ -1.73
SLC44A4Q53GD3 ARL4AP2-201ENST00000507378 601 ntBASIC4.22□□□□□ -1.73
SLC44A4Q53GD3 LINC02315-201ENST00000515218 696 ntTSL 5 BASIC4.22□□□□□ -1.73
SLC44A4Q53GD3 RNU6-875P-201ENST00000516488 106 ntBASIC4.22□□□□□ -1.73
SLC44A4Q53GD3 Y_RNA.704-201ENST00000516851 102 ntBASIC4.22□□□□□ -1.73
SLC44A4Q53GD3 RAB11AP2-201ENST00000545905 639 ntBASIC4.22□□□□□ -1.73
SLC44A4Q53GD3 AC064805.2-201ENST00000582959 523 ntTSL 4 BASIC4.22□□□□□ -1.73
SLC44A4Q53GD3 AC097467.3-204ENST00000595229 827 ntTSL 5 BASIC4.22□□□□□ -1.73
SLC44A4Q53GD3 AL590235.2-201ENST00000602641 632 ntTSL 5 BASIC4.22□□□□□ -1.73
SLC44A4Q53GD3 BNIP3P9-201ENST00000603714 553 ntBASIC4.22□□□□□ -1.73
SLC44A4Q53GD3 AL049634.3-201ENST00000604968 457 ntBASIC4.22□□□□□ -1.73
SLC44A4Q53GD3 AL136363.1-201ENST00000605349 337 ntBASIC4.22□□□□□ -1.73
SLC44A4Q53GD3 AC083798.2-205ENST00000608015 575 ntTSL 5 BASIC4.22□□□□□ -1.73
SLC44A4Q53GD3 DCAF17-212ENST00000611110 975 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
SLC44A4Q53GD3 AC245517.5-201ENST00000611529 162 ntBASIC4.22□□□□□ -1.73
SLC44A4Q53GD3 AC019176.2-201ENST00000611579 315 ntBASIC4.22□□□□□ -1.73
SLC44A4Q53GD3 AL138721.1-201ENST00000616756 179 ntBASIC4.22□□□□□ -1.73
SLC44A4Q53GD3 AC091905.1-201ENST00000624400 311 ntBASIC4.22□□□□□ -1.73
SLC44A4Q53GD3 AC092017.3-201ENST00000638880 536 ntAPPRIS P1 TSL 5 BASIC4.22□□□□□ -1.73
SLC44A4Q53GD3 CNOT10-206ENST00000454516 2760 ntTSL 2 BASIC4.22□□□□□ -1.73
SLC44A4Q53GD3 SKIL-201ENST00000259119 3057 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
SLC44A4Q53GD3 ETV1-203ENST00000403527 3363 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
SLC44A4Q53GD3 PPP1R9A-208ENST00000456331 10090 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
SLC44A4Q53GD3 NFAT5-203ENST00000393742 13067 ntAPPRIS ALT1 TSL 1 (best) BASIC4.21□□□□□ -1.74
SLC44A4Q53GD3 VEZT-201ENST00000261219 3435 ntTSL 5 BASIC4.21□□□□□ -1.74
SLC44A4Q53GD3 MIR423-201ENST00000362201 94 ntBASIC4.21□□□□□ -1.74
SLC44A4Q53GD3 Y_RNA.11-201ENST00000362375 109 ntBASIC4.21□□□□□ -1.74
SLC44A4Q53GD3 RNU6-1155P-201ENST00000363554 107 ntBASIC4.21□□□□□ -1.74
SLC44A4Q53GD3 RNA5SP322-201ENST00000363617 119 ntBASIC4.21□□□□□ -1.74
SLC44A4Q53GD3 CRISP3-203ENST00000371159 872 ntAPPRIS ALT2 TSL 5 BASIC4.21□□□□□ -1.74
SLC44A4Q53GD3 SNORA20.2-201ENST00000383922 131 ntBASIC4.21□□□□□ -1.74
SLC44A4Q53GD3 RNU1-89P-201ENST00000384592 164 ntBASIC4.21□□□□□ -1.74
SLC44A4Q53GD3 MIR30B-201ENST00000384850 88 ntBASIC4.21□□□□□ -1.74
SLC44A4Q53GD3 SNORA57.3-201ENST00000411095 141 ntBASIC4.21□□□□□ -1.74
SLC44A4Q53GD3 FRMPD3-AS1-201ENST00000415252 457 ntTSL 3 BASIC4.21□□□□□ -1.74
SLC44A4Q53GD3 TOMM22P1-201ENST00000418578 312 ntBASIC4.21□□□□□ -1.74
SLC44A4Q53GD3 AL137014.1-201ENST00000420490 1226 ntBASIC4.21□□□□□ -1.74
SLC44A4Q53GD3 AC245054.1-201ENST00000420944 258 ntBASIC4.21□□□□□ -1.74
SLC44A4Q53GD3 AC079780.1-201ENST00000428259 207 ntBASIC4.21□□□□□ -1.74
SLC44A4Q53GD3 AC133104.1-201ENST00000429100 218 ntBASIC4.21□□□□□ -1.74
SLC44A4Q53GD3 MTCO2P11-201ENST00000431069 680 ntBASIC4.21□□□□□ -1.74
SLC44A4Q53GD3 AC006011.1-201ENST00000442758 349 ntBASIC4.21□□□□□ -1.74
SLC44A4Q53GD3 AL442647.1-201ENST00000449485 481 ntTSL 5 BASIC4.21□□□□□ -1.74
SLC44A4Q53GD3 HMGB3P22-202ENST00000451823 572 ntBASIC4.21□□□□□ -1.74
SLC44A4Q53GD3 ELOCP23-201ENST00000452014 332 ntBASIC4.21□□□□□ -1.74
SLC44A4Q53GD3 AC234775.1-201ENST00000454247 670 ntBASIC4.21□□□□□ -1.74
SLC44A4Q53GD3 LINC01210-201ENST00000465283 625 ntTSL 2 BASIC4.21□□□□□ -1.74
SLC44A4Q53GD3 AC104164.2-201ENST00000496953 495 ntBASIC4.21□□□□□ -1.74
SLC44A4Q53GD3 THAP6-203ENST00000502620 582 ntTSL 3 BASIC4.21□□□□□ -1.74
SLC44A4Q53GD3 AC114797.1-201ENST00000514003 728 ntBASIC4.21□□□□□ -1.74
SLC44A4Q53GD3 TRAPPC2P2-201ENST00000517589 409 ntBASIC4.21□□□□□ -1.74
SLC44A4Q53GD3 AC084116.3-201ENST00000519123 429 ntTSL 3 BASIC4.21□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 124.9 ms