Protein–RNA interactions for Protein: Q3MJ40

CCDC144B, Coiled-coil domain-containing protein 144B, humanhuman

Predictions only

Length 725 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144BQ3MJ40 RNU2-9P-201ENST00000410194 145 ntBASIC4.9□□□□□ -1.63
CCDC144BQ3MJ40 RNA5SP129-201ENST00000410276 118 ntBASIC4.9□□□□□ -1.63
CCDC144BQ3MJ40 RNA5SP104-201ENST00000410989 118 ntBASIC4.9□□□□□ -1.63
CCDC144BQ3MJ40 RN7SKP140-201ENST00000411196 284 ntBASIC4.9□□□□□ -1.63
CCDC144BQ3MJ40 CRYBB2P1-203ENST00000415709 538 ntBASIC4.9□□□□□ -1.63
CCDC144BQ3MJ40 AC010163.2-201ENST00000416341 381 ntTSL 2 BASIC4.9□□□□□ -1.63
CCDC144BQ3MJ40 USP9YP27-201ENST00000418455 438 ntBASIC4.9□□□□□ -1.63
CCDC144BQ3MJ40 AL353193.1-201ENST00000421444 268 ntBASIC4.9□□□□□ -1.63
CCDC144BQ3MJ40 AL157831.1-201ENST00000426134 473 ntBASIC4.9□□□□□ -1.63
CCDC144BQ3MJ40 UTS2B-203ENST00000427544 676 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
CCDC144BQ3MJ40 LINC01817-201ENST00000429317 564 ntTSL 4 BASIC4.9□□□□□ -1.63
CCDC144BQ3MJ40 MRPS10P2-201ENST00000431226 381 ntBASIC4.9□□□□□ -1.63
CCDC144BQ3MJ40 RPL7P54-201ENST00000438336 674 ntBASIC4.9□□□□□ -1.63
CCDC144BQ3MJ40 BNIP3P2-201ENST00000441221 577 ntBASIC4.9□□□□□ -1.63
CCDC144BQ3MJ40 RNU7-182P-201ENST00000459009 62 ntBASIC4.9□□□□□ -1.63
CCDC144BQ3MJ40 AC083798.1-201ENST00000472671 131 ntBASIC4.9□□□□□ -1.63
CCDC144BQ3MJ40 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC4.9□□□□□ -1.63
CCDC144BQ3MJ40 AC008957.1-201ENST00000510740 478 ntTSL 3 BASIC4.9□□□□□ -1.63
CCDC144BQ3MJ40 AC105417.1-201ENST00000514691 285 ntBASIC4.9□□□□□ -1.63
CCDC144BQ3MJ40 RNU6-352P-201ENST00000516908 107 ntBASIC4.9□□□□□ -1.63
CCDC144BQ3MJ40 AC024958.1-203ENST00000520256 577 ntTSL 2 BASIC4.9□□□□□ -1.63
CCDC144BQ3MJ40 IGKV2D-19-201ENST00000523346 262 ntBASIC4.9□□□□□ -1.63
CCDC144BQ3MJ40 AP001646.1-201ENST00000527936 915 ntBASIC4.9□□□□□ -1.63
CCDC144BQ3MJ40 AC087318.1-201ENST00000536786 389 ntTSL 3 BASIC4.9□□□□□ -1.63
CCDC144BQ3MJ40 AF099810.1-201ENST00000554219 525 ntTSL 3 BASIC4.9□□□□□ -1.63
CCDC144BQ3MJ40 AC076968.1-201ENST00000566418 429 ntTSL 5 BASIC4.9□□□□□ -1.63
CCDC144BQ3MJ40 AC002115.1-201ENST00000589603 568 ntTSL 4 BASIC4.9□□□□□ -1.63
CCDC144BQ3MJ40 AC245389.1-201ENST00000605141 529 ntBASIC4.9□□□□□ -1.63
CCDC144BQ3MJ40 AL121992.2-201ENST00000606262 256 ntBASIC4.9□□□□□ -1.63
CCDC144BQ3MJ40 AC130324.3-201ENST00000614165 542 ntBASIC4.9□□□□□ -1.63
CCDC144BQ3MJ40 uc_338.11-201ENST00000619132 160 ntBASIC4.9□□□□□ -1.63
CCDC144BQ3MJ40 MIR3688-2-201ENST00000636963 87 ntBASIC4.9□□□□□ -1.63
CCDC144BQ3MJ40 SLC30A6-205ENST00000435660 4776 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
CCDC144BQ3MJ40 ZNF660-201ENST00000322734 5834 ntAPPRIS P1 TSL 2 BASIC4.9□□□□□ -1.63
CCDC144BQ3MJ40 SOS1-202ENST00000402219 8314 ntAPPRIS P2 TSL 1 (best) BASIC4.9□□□□□ -1.63
CCDC144BQ3MJ40 SLAIN1-203ENST00000351546 2394 ntTSL 2 BASIC4.9□□□□□ -1.63
CCDC144BQ3MJ40 MME-201ENST00000360490 2360 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
CCDC144BQ3MJ40 DTNA-208ENST00000554864 1680 ntAPPRIS ALT2 TSL 1 (best) BASIC4.89□□□□□ -1.63
CCDC144BQ3MJ40 PUS7L-201ENST00000344862 13593 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
CCDC144BQ3MJ40 PTP4A1-205ENST00000626021 2203 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
CCDC144BQ3MJ40 PLEKHG7-203ENST00000638590 3267 ntAPPRIS P1 TSL 2 BASIC4.89□□□□□ -1.63
CCDC144BQ3MJ40 LINC00158-201ENST00000332587 1476 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
CCDC144BQ3MJ40 FLG-AS1-205ENST00000445097 2857 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
CCDC144BQ3MJ40 RNU1-14P-201ENST00000362759 152 ntBASIC4.89□□□□□ -1.63
CCDC144BQ3MJ40 RNU6-701P-201ENST00000384059 107 ntBASIC4.89□□□□□ -1.63
CCDC144BQ3MJ40 MIR514A1-201ENST00000385133 98 ntBASIC4.89□□□□□ -1.63
CCDC144BQ3MJ40 RNA5SP36-201ENST00000410197 133 ntBASIC4.89□□□□□ -1.63
CCDC144BQ3MJ40 RNU6-387P-201ENST00000411331 105 ntBASIC4.89□□□□□ -1.63
CCDC144BQ3MJ40 AL513331.1-201ENST00000411908 397 ntBASIC4.89□□□□□ -1.63
CCDC144BQ3MJ40 AL590383.1-201ENST00000428602 75 ntBASIC4.89□□□□□ -1.63
CCDC144BQ3MJ40 MTATP6P16-201ENST00000434543 526 ntBASIC4.89□□□□□ -1.63
CCDC144BQ3MJ40 AC005871.1-201ENST00000450247 475 ntTSL 3 BASIC4.89□□□□□ -1.63
CCDC144BQ3MJ40 ABCF2P2-201ENST00000450549 296 ntBASIC4.89□□□□□ -1.63
CCDC144BQ3MJ40 RNU7-63P-201ENST00000459054 62 ntBASIC4.89□□□□□ -1.63
CCDC144BQ3MJ40 RNU6-261P-201ENST00000459506 102 ntBASIC4.89□□□□□ -1.63
CCDC144BQ3MJ40 MTAPP1-201ENST00000489154 819 ntBASIC4.89□□□□□ -1.63
CCDC144BQ3MJ40 AC139783.2-201ENST00000504847 1145 ntBASIC4.89□□□□□ -1.63
CCDC144BQ3MJ40 ADGRL3-AS1-203ENST00000506704 606 ntTSL 5 BASIC4.89□□□□□ -1.63
CCDC144BQ3MJ40 SCARNA15.2-201ENST00000516409 127 ntBASIC4.89□□□□□ -1.63
CCDC144BQ3MJ40 RNA5SP519-201ENST00000516480 119 ntBASIC4.89□□□□□ -1.63
CCDC144BQ3MJ40 CARD18-201ENST00000526823 627 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
CCDC144BQ3MJ40 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC4.89□□□□□ -1.63
CCDC144BQ3MJ40 LINC00520-201ENST00000554186 831 ntTSL 5 BASIC4.89□□□□□ -1.63
CCDC144BQ3MJ40 C16orf97-203ENST00000566314 281 ntTSL 3 BASIC4.89□□□□□ -1.63
CCDC144BQ3MJ40 RPL23AP87-202ENST00000573039 466 ntBASIC4.89□□□□□ -1.63
CCDC144BQ3MJ40 MIR4429-201ENST00000580105 73 ntBASIC4.89□□□□□ -1.63
CCDC144BQ3MJ40 AC006504.3-201ENST00000586818 523 ntBASIC4.89□□□□□ -1.63
CCDC144BQ3MJ40 AC011524.1-201ENST00000590167 240 ntTSL 3 BASIC4.89□□□□□ -1.63
CCDC144BQ3MJ40 AC007687.1-201ENST00000602704 304 ntBASIC4.89□□□□□ -1.63
CCDC144BQ3MJ40 AL162413.1-201ENST00000603198 110 ntBASIC4.89□□□□□ -1.63
CCDC144BQ3MJ40 AC010591.1-201ENST00000603941 649 ntBASIC4.89□□□□□ -1.63
CCDC144BQ3MJ40 AC012603.1-201ENST00000606424 528 ntBASIC4.89□□□□□ -1.63
CCDC144BQ3MJ40 AL021997.2-201ENST00000615674 271 ntBASIC4.89□□□□□ -1.63
CCDC144BQ3MJ40 AL589994.2-201ENST00000621124 579 ntBASIC4.89□□□□□ -1.63
CCDC144BQ3MJ40 AL356321.1-201ENST00000621360 228 ntBASIC4.89□□□□□ -1.63
CCDC144BQ3MJ40 AL445363.3-201ENST00000623080 671 ntBASIC4.89□□□□□ -1.63
CCDC144BQ3MJ40 AC109471.3-201ENST00000625219 233 ntTSL 5 BASIC4.89□□□□□ -1.63
CCDC144BQ3MJ40 SATB1-AS1-226ENST00000625515 776 ntTSL 5 BASIC4.89□□□□□ -1.63
CCDC144BQ3MJ40 RMDN2-AS1-204ENST00000626669 448 ntTSL 5 BASIC4.89□□□□□ -1.63
CCDC144BQ3MJ40 ZNF345-216ENST00000640438 963 ntTSL 5 BASIC4.89□□□□□ -1.63
CCDC144BQ3MJ40 ZNF43-207ENST00000595461 3399 ntAPPRIS ALT2 TSL 1 (best) BASIC4.89□□□□□ -1.63
CCDC144BQ3MJ40 WDR72-204ENST00000559418 3602 ntTSL 5 BASIC4.89□□□□□ -1.63
CCDC144BQ3MJ40 KIFAP3-202ENST00000367765 4111 ntTSL 2 BASIC4.88□□□□□ -1.63
CCDC144BQ3MJ40 ARHGEF38-202ENST00000420470 5454 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
CCDC144BQ3MJ40 CDH8-205ENST00000577730 8009 ntTSL 5 BASIC4.88□□□□□ -1.63
CCDC144BQ3MJ40 OR52E2-201ENST00000321522 978 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
CCDC144BQ3MJ40 Y_RNA.248-201ENST00000364501 109 ntBASIC4.88□□□□□ -1.63
CCDC144BQ3MJ40 MIR1911-201ENST00000410783 80 ntBASIC4.88□□□□□ -1.63
CCDC144BQ3MJ40 AC009505.1-201ENST00000413151 424 ntTSL 2 BASIC4.88□□□□□ -1.63
CCDC144BQ3MJ40 LINC01423-201ENST00000414189 608 ntTSL 3 BASIC4.88□□□□□ -1.63
CCDC144BQ3MJ40 ELOCP14-201ENST00000428070 331 ntBASIC4.88□□□□□ -1.63
CCDC144BQ3MJ40 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC4.88□□□□□ -1.63
CCDC144BQ3MJ40 COX6B1P7-201ENST00000430845 235 ntBASIC4.88□□□□□ -1.63
CCDC144BQ3MJ40 HMGB1P27-201ENST00000431429 603 ntBASIC4.88□□□□□ -1.63
CCDC144BQ3MJ40 AL139415.2-201ENST00000431968 163 ntBASIC4.88□□□□□ -1.63
CCDC144BQ3MJ40 ELOCP7-201ENST00000439968 331 ntBASIC4.88□□□□□ -1.63
CCDC144BQ3MJ40 AL121877.1-201ENST00000453704 622 ntBASIC4.88□□□□□ -1.63
CCDC144BQ3MJ40 RPL35AP15-201ENST00000468042 339 ntBASIC4.88□□□□□ -1.63
CCDC144BQ3MJ40 MCCC1-AS1-201ENST00000471731 765 ntTSL 5 BASIC4.88□□□□□ -1.63
CCDC144BQ3MJ40 AL049874.1-201ENST00000489560 388 ntBASIC4.88□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 94.5 ms