Protein–RNA interactions for Protein: Q08174

PCDH1, Protocadherin-1, humanhuman

Predictions only

Length 1,060 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1Q08174 FKBP1AP1-201ENST00000594588 318 ntBASIC4.99□□□□□ -1.61
PCDH1Q08174 RNU6-85P-201ENST00000605989 107 ntBASIC4.99□□□□□ -1.61
PCDH1Q08174 MIR15A-201ENST00000607334 83 ntBASIC4.99□□□□□ -1.61
PCDH1Q08174 RPSAP73-201ENST00000614820 330 ntBASIC4.99□□□□□ -1.61
PCDH1Q08174 AL138825.1-201ENST00000618587 192 ntBASIC4.99□□□□□ -1.61
PCDH1Q08174 C6-202ENST00000337836 3551 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
PCDH1Q08174 AL050331.3-201ENST00000448740 2081 ntTSL 2 BASIC4.99□□□□□ -1.61
PCDH1Q08174 CEP97-201ENST00000341893 8361 ntAPPRIS P3 TSL 1 (best) BASIC4.99□□□□□ -1.61
PCDH1Q08174 RCOR3-201ENST00000367005 4246 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
PCDH1Q08174 DST-202ENST00000312431 17756 ntAPPRIS P2 TSL 5 BASIC4.99□□□□□ -1.61
PCDH1Q08174 LINC02431-201ENST00000503929 3601 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
PCDH1Q08174 NBPF14-206ENST00000614999 10080 ntTSL 5 BASIC4.99□□□□□ -1.61
PCDH1Q08174 ACSL5-204ENST00000393081 3380 ntAPPRIS P1 TSL 5 BASIC4.99□□□□□ -1.61
PCDH1Q08174 GYS2-201ENST00000261195 3132 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
PCDH1Q08174 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC4.98□□□□□ -1.61
PCDH1Q08174 RNU4-44P-201ENST00000363050 141 ntBASIC4.98□□□□□ -1.61
PCDH1Q08174 Y_RNA.126-201ENST00000363382 111 ntBASIC4.98□□□□□ -1.61
PCDH1Q08174 RPL7L1P9-201ENST00000431298 745 ntBASIC4.98□□□□□ -1.61
PCDH1Q08174 AL133396.1-201ENST00000432048 687 ntBASIC4.98□□□□□ -1.61
PCDH1Q08174 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC4.98□□□□□ -1.61
PCDH1Q08174 KNOP1P3-201ENST00000446933 426 ntBASIC4.98□□□□□ -1.61
PCDH1Q08174 OR1H1P-201ENST00000448731 937 ntBASIC4.98□□□□□ -1.61
PCDH1Q08174 AC117465.1-201ENST00000457125 522 ntTSL 3 BASIC4.98□□□□□ -1.61
PCDH1Q08174 CEACAMP4-201ENST00000457676 421 ntBASIC4.98□□□□□ -1.61
PCDH1Q08174 AC092324.1-201ENST00000468671 324 ntBASIC4.98□□□□□ -1.61
PCDH1Q08174 BCL2L15-204ENST00000471267 267 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
PCDH1Q08174 RPL17P19-201ENST00000489069 552 ntBASIC4.98□□□□□ -1.61
PCDH1Q08174 AC073073.1-201ENST00000493920 463 ntBASIC4.98□□□□□ -1.61
PCDH1Q08174 AC016651.1-201ENST00000502680 822 ntTSL 3 BASIC4.98□□□□□ -1.61
PCDH1Q08174 Y_RNA.715-201ENST00000517082 110 ntBASIC4.98□□□□□ -1.61
PCDH1Q08174 RNU6-840P-201ENST00000517275 65 ntBASIC4.98□□□□□ -1.61
PCDH1Q08174 MAL2-201ENST00000522112 573 ntTSL 4 BASIC4.98□□□□□ -1.61
PCDH1Q08174 AC025437.5-201ENST00000522769 314 ntTSL 3 BASIC4.98□□□□□ -1.61
PCDH1Q08174 AP002833.1-201ENST00000530572 566 ntTSL 3 BASIC4.98□□□□□ -1.61
PCDH1Q08174 AC007527.1-201ENST00000535528 313 ntTSL 2 BASIC4.98□□□□□ -1.61
PCDH1Q08174 AC024940.3-201ENST00000538551 316 ntBASIC4.98□□□□□ -1.61
PCDH1Q08174 DIAPH2-AS1-203ENST00000542084 450 ntTSL 5 BASIC4.98□□□□□ -1.61
PCDH1Q08174 AC138360.1-201ENST00000552332 386 ntTSL 3 BASIC4.98□□□□□ -1.61
PCDH1Q08174 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC4.98□□□□□ -1.61
PCDH1Q08174 C16orf97-203ENST00000566314 281 ntTSL 3 BASIC4.98□□□□□ -1.61
PCDH1Q08174 RN7SL652P-201ENST00000577769 300 ntBASIC4.98□□□□□ -1.61
PCDH1Q08174 AC067852.4-201ENST00000590314 478 ntBASIC4.98□□□□□ -1.61
PCDH1Q08174 AC013244.1-201ENST00000604279 193 ntBASIC4.98□□□□□ -1.61
PCDH1Q08174 SUMO2P15-201ENST00000604285 278 ntBASIC4.98□□□□□ -1.61
PCDH1Q08174 AL161616.1-201ENST00000611867 286 ntBASIC4.98□□□□□ -1.61
PCDH1Q08174 SHMT1-211ENST00000618902 378 ntTSL 5 BASIC4.98□□□□□ -1.61
PCDH1Q08174 AP001005.3-201ENST00000622049 129 ntBASIC4.98□□□□□ -1.61
PCDH1Q08174 MIR4272-201ENST00000635924 64 ntBASIC4.98□□□□□ -1.61
PCDH1Q08174 FAM91A3P-201ENST00000456826 2544 ntBASIC4.98□□□□□ -1.61
PCDH1Q08174 LEPROT-206ENST00000613538 4625 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
PCDH1Q08174 TRDN-206ENST00000628709 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.98□□□□□ -1.61
PCDH1Q08174 ZNF285-205ENST00000614994 6012 ntAPPRIS P3 TSL 1 (best) BASIC4.98□□□□□ -1.61
PCDH1Q08174 ZBTB44-210ENST00000530205 2179 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
PCDH1Q08174 NEAT1-202ENST00000501122 22743 ntBASIC4.98□□□□□ -1.61
PCDH1Q08174 RC3H1-202ENST00000367694 3775 ntAPPRIS ALT1 TSL 2 BASIC4.98□□□□□ -1.61
PCDH1Q08174 AC109780.1-201ENST00000451768 1344 ntBASIC4.97□□□□□ -1.61
PCDH1Q08174 ANKRD36B-202ENST00000359901 4297 ntAPPRIS P1 TSL 5 BASIC4.97□□□□□ -1.61
PCDH1Q08174 LRRC63-203ENST00000595396 2327 ntAPPRIS P2 TSL 5 BASIC4.97□□□□□ -1.61
PCDH1Q08174 RUFY3-201ENST00000226328 4233 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
PCDH1Q08174 LANCL1-204ENST00000441020 4503 ntAPPRIS P1 TSL 5 BASIC4.97□□□□□ -1.61
PCDH1Q08174 DDX4-204ENST00000505374 2884 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
PCDH1Q08174 TMEM68-218ENST00000617782 2477 ntAPPRIS P1 TSL 5 BASIC4.97□□□□□ -1.61
PCDH1Q08174 AC004160.1-212ENST00000421121 2078 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
PCDH1Q08174 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC4.97□□□□□ -1.61
PCDH1Q08174 PROM1-220ENST00000540805 3908 ntAPPRIS ALT2 TSL 5 BASIC4.97□□□□□ -1.61
PCDH1Q08174 RNU6-472P-201ENST00000384299 107 ntBASIC4.97□□□□□ -1.61
PCDH1Q08174 Y_RNA.577-201ENST00000384794 101 ntBASIC4.97□□□□□ -1.61
PCDH1Q08174 TRAV24-201ENST00000390453 343 ntAPPRIS P1 BASIC4.97□□□□□ -1.61
PCDH1Q08174 RPL21P1-201ENST00000399532 476 ntBASIC4.97□□□□□ -1.61
PCDH1Q08174 HSPE1P8-201ENST00000406997 288 ntBASIC4.97□□□□□ -1.61
PCDH1Q08174 U3.32-201ENST00000408116 212 ntBASIC4.97□□□□□ -1.61
PCDH1Q08174 RNU6-712P-201ENST00000410558 100 ntBASIC4.97□□□□□ -1.61
PCDH1Q08174 LIMS1-AS1-201ENST00000411710 477 ntTSL 3 BASIC4.97□□□□□ -1.61
PCDH1Q08174 BX842559.1-201ENST00000419615 532 ntBASIC4.97□□□□□ -1.61
PCDH1Q08174 AL139148.1-201ENST00000427122 680 ntBASIC4.97□□□□□ -1.61
PCDH1Q08174 Z82246.1-201ENST00000428201 457 ntTSL 2 BASIC4.97□□□□□ -1.61
PCDH1Q08174 ARL5AP4-201ENST00000430731 512 ntBASIC4.97□□□□□ -1.61
PCDH1Q08174 MACC1-AS1-201ENST00000439285 639 ntTSL 3 BASIC4.97□□□□□ -1.61
PCDH1Q08174 HSFY6P-201ENST00000445573 403 ntBASIC4.97□□□□□ -1.61
PCDH1Q08174 AC012158.1-204ENST00000483430 465 ntBASIC4.97□□□□□ -1.61
PCDH1Q08174 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC4.97□□□□□ -1.61
PCDH1Q08174 MRPS33P2-201ENST00000507850 322 ntBASIC4.97□□□□□ -1.61
PCDH1Q08174 AP006245.2-201ENST00000522004 300 ntBASIC4.97□□□□□ -1.61
PCDH1Q08174 LINC02408-202ENST00000538573 559 ntTSL 4 BASIC4.97□□□□□ -1.61
PCDH1Q08174 HMGB3P26-201ENST00000560051 582 ntBASIC4.97□□□□□ -1.61
PCDH1Q08174 AL390726.5-202ENST00000564800 256 ntBASIC4.97□□□□□ -1.61
PCDH1Q08174 RPL23AP87-202ENST00000573039 466 ntBASIC4.97□□□□□ -1.61
PCDH1Q08174 AP005059.1-201ENST00000578391 456 ntTSL 2 BASIC4.97□□□□□ -1.61
PCDH1Q08174 AC090457.1-201ENST00000579775 211 ntTSL 3 BASIC4.97□□□□□ -1.61
PCDH1Q08174 AC233702.9-201ENST00000581528 203 ntBASIC4.97□□□□□ -1.61
PCDH1Q08174 AC008794.2-201ENST00000587779 293 ntTSL 2 BASIC4.97□□□□□ -1.61
PCDH1Q08174 AC078899.3-201ENST00000599065 212 ntBASIC4.97□□□□□ -1.61
PCDH1Q08174 CCL14-204ENST00000622526 472 ntTSL 3 BASIC4.97□□□□□ -1.61
PCDH1Q08174 AC138627.2-201ENST00000624202 601 ntBASIC4.97□□□□□ -1.61
PCDH1Q08174 SPTY2D1-AS1-204ENST00000634992 373 ntAPPRIS P5 TSL 5 BASIC4.97□□□□□ -1.61
PCDH1Q08174 AC073869.10-201ENST00000642016 354 ntBASIC4.97□□□□□ -1.61
PCDH1Q08174 C5orf42-201ENST00000425232 11199 ntAPPRIS P2 TSL 5 BASIC4.97□□□□□ -1.61
PCDH1Q08174 KIF15-203ENST00000425755 3460 ntTSL 5 BASIC4.97□□□□□ -1.61
PCDH1Q08174 DNTTIP2-202ENST00000436063 5897 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
PCDH1Q08174 RPL34-AS1-202ENST00000507248 3713 ntTSL 2 BASIC4.97□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 90.2 ms