Protein–RNA interactions for Protein: P62857

RPS28, 40S ribosomal protein S28, humanhuman

Known RBP Predictions only

Length 69 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28P62857 RNU6-748P-201ENST00000384648 107 ntBASIC1.28□□□□□ -2.2
RPS28P62857 MIR105-2-201ENST00000385083 81 ntBASIC1.28□□□□□ -2.2
RPS28P62857 MIR765-201ENST00000390226 114 ntBASIC1.28□□□□□ -2.2
RPS28P62857 AC068050.1-201ENST00000394891 380 ntBASIC1.28□□□□□ -2.2
RPS28P62857 AL591416.1-201ENST00000404015 867 ntBASIC1.28□□□□□ -2.2
RPS28P62857 BTF3P7-201ENST00000407097 488 ntBASIC1.28□□□□□ -2.2
RPS28P62857 RNU6-516P-201ENST00000411381 104 ntBASIC1.28□□□□□ -2.2
RPS28P62857 AL034347.1-201ENST00000420766 835 ntTSL 3 BASIC1.28□□□□□ -2.2
RPS28P62857 AL391832.1-201ENST00000423963 423 ntTSL 5 BASIC1.28□□□□□ -2.2
RPS28P62857 AL133268.4-201ENST00000424868 472 ntTSL 3 BASIC1.28□□□□□ -2.2
RPS28P62857 AC093422.3-201ENST00000428506 305 ntBASIC1.28□□□□□ -2.2
RPS28P62857 LINC00392-201ENST00000430033 557 ntTSL 3 BASIC1.28□□□□□ -2.2
RPS28P62857 Z98742.2-201ENST00000431564 187 ntBASIC1.28□□□□□ -2.2
RPS28P62857 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC1.28□□□□□ -2.2
RPS28P62857 CYCSP42-201ENST00000450823 238 ntBASIC1.28□□□□□ -2.2
RPS28P62857 RPL23AP24-201ENST00000458203 385 ntBASIC1.28□□□□□ -2.2
RPS28P62857 RN7SL612P-201ENST00000497704 295 ntBASIC1.28□□□□□ -2.2
RPS28P62857 CSN1S1-202ENST00000505782 871 ntAPPRIS ALT2 TSL 5 BASIC1.28□□□□□ -2.2
RPS28P62857 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC1.28□□□□□ -2.2
RPS28P62857 MRPS33P3-201ENST00000513456 322 ntBASIC1.28□□□□□ -2.2
RPS28P62857 RNA5SP362-201ENST00000516048 118 ntBASIC1.28□□□□□ -2.2
RPS28P62857 SNORA31.22-201ENST00000517204 135 ntBASIC1.28□□□□□ -2.2
RPS28P62857 CDH12P4-201ENST00000517835 295 ntBASIC1.28□□□□□ -2.2
RPS28P62857 CDH12P3-201ENST00000517935 295 ntBASIC1.28□□□□□ -2.2
RPS28P62857 CDH12P1-201ENST00000518435 295 ntBASIC1.28□□□□□ -2.2
RPS28P62857 HSPA8P13-201ENST00000523715 472 ntBASIC1.28□□□□□ -2.2
RPS28P62857 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC1.28□□□□□ -2.2
RPS28P62857 AL359212.1-201ENST00000556608 614 ntBASIC1.28□□□□□ -2.2
RPS28P62857 AC012435.1-202ENST00000568772 240 ntBASIC1.28□□□□□ -2.2
RPS28P62857 AGGF1P6-201ENST00000569213 976 ntBASIC1.28□□□□□ -2.2
RPS28P62857 MRPL45P2-203ENST00000573318 473 ntBASIC1.28□□□□□ -2.2
RPS28P62857 SNORD95-201ENST00000579879 68 ntBASIC1.28□□□□□ -2.2
RPS28P62857 MIR4713-201ENST00000582691 75 ntBASIC1.28□□□□□ -2.2
RPS28P62857 AC011451.1-201ENST00000591336 405 ntTSL 3 BASIC1.28□□□□□ -2.2
RPS28P62857 AL683887.1-201ENST00000603401 287 ntTSL 3 BASIC1.28□□□□□ -2.2
RPS28P62857 RNU4-89P-201ENST00000607443 133 ntBASIC1.28□□□□□ -2.2
RPS28P62857 AC005344.1-201ENST00000613391 459 ntBASIC1.28□□□□□ -2.2
RPS28P62857 AC100793.4-201ENST00000613683 429 ntBASIC1.28□□□□□ -2.2
RPS28P62857 AL590099.1-201ENST00000615276 138 ntBASIC1.28□□□□□ -2.2
RPS28P62857 MIR6736-201ENST00000616799 59 ntBASIC1.28□□□□□ -2.2
RPS28P62857 MIR8059-201ENST00000620427 81 ntBASIC1.28□□□□□ -2.2
RPS28P62857 U4.3-201ENST00000621047 82 ntBASIC1.28□□□□□ -2.2
RPS28P62857 Z99571.1-201ENST00000636677 394 ntBASIC1.28□□□□□ -2.2
RPS28P62857 OR4C15-202ENST00000642128 951 ntAPPRIS P1 BASIC1.28□□□□□ -2.2
RPS28P62857 OR5BR1P-201ENST00000524992 1330 ntBASIC1.28□□□□□ -2.2
RPS28P62857 AL359854.1-201ENST00000614203 1594 ntBASIC1.28□□□□□ -2.2
RPS28P62857 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC1.28□□□□□ -2.2
RPS28P62857 OFD1P5Y-201ENST00000447585 2590 ntBASIC1.28□□□□□ -2.2
RPS28P62857 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC1.28□□□□□ -2.2
RPS28P62857 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC1.27□□□□□ -2.21
RPS28P62857 TAS2R13-201ENST00000390677 1637 ntAPPRIS P1 BASIC1.27□□□□□ -2.21
RPS28P62857 WFDC10B-202ENST00000335769 475 ntAPPRIS P4 TSL 1 (best) BASIC1.27□□□□□ -2.21
RPS28P62857 MIR22-201ENST00000362190 85 ntBASIC1.27□□□□□ -2.21
RPS28P62857 AC234772.1-201ENST00000377927 937 ntBASIC1.27□□□□□ -2.21
RPS28P62857 MIR518A2-201ENST00000384966 87 ntBASIC1.27□□□□□ -2.21
RPS28P62857 RPS3AP23-201ENST00000401762 784 ntBASIC1.27□□□□□ -2.21
RPS28P62857 NDUFS5P1-201ENST00000405668 289 ntBASIC1.27□□□□□ -2.21
RPS28P62857 AL139098.1-201ENST00000407291 389 ntBASIC1.27□□□□□ -2.21
RPS28P62857 VN1R51P-201ENST00000411675 945 ntBASIC1.27□□□□□ -2.21
RPS28P62857 AL355433.1-201ENST00000422804 300 ntBASIC1.27□□□□□ -2.21
RPS28P62857 USP9YP15-201ENST00000442391 422 ntBASIC1.27□□□□□ -2.21
RPS28P62857 AL929288.2-201ENST00000446368 407 ntBASIC1.27□□□□□ -2.21
RPS28P62857 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC1.27□□□□□ -2.21
RPS28P62857 AL021393.1-201ENST00000456740 539 ntTSL 5 BASIC1.27□□□□□ -2.21
RPS28P62857 AC023141.9-201ENST00000458734 412 ntBASIC1.27□□□□□ -2.21
RPS28P62857 RCHY1-206ENST00000507014 650 ntTSL 3 BASIC1.27□□□□□ -2.21
RPS28P62857 AC010245.1-201ENST00000511329 754 ntTSL 3 BASIC1.27□□□□□ -2.21
RPS28P62857 RNU6-416P-201ENST00000516265 103 ntBASIC1.27□□□□□ -2.21
RPS28P62857 SCARNA16.3-201ENST00000516595 184 ntBASIC1.27□□□□□ -2.21
RPS28P62857 HMGN1P28-201ENST00000521340 364 ntBASIC1.27□□□□□ -2.21
RPS28P62857 AC024681.2-201ENST00000523525 204 ntTSL 5 BASIC1.27□□□□□ -2.21
RPS28P62857 EMP1-206ENST00000537612 505 ntTSL 3 BASIC1.27□□□□□ -2.21
RPS28P62857 CYCSP30-201ENST00000546447 172 ntBASIC1.27□□□□□ -2.21
RPS28P62857 LINC02316-201ENST00000553346 768 ntTSL 3 BASIC1.27□□□□□ -2.21
RPS28P62857 AL358333.2-201ENST00000556834 529 ntTSL 5 BASIC1.27□□□□□ -2.21
RPS28P62857 AL157786.1-204ENST00000594870 506 ntTSL 3 BASIC1.27□□□□□ -2.21
RPS28P62857 DUXAP11-201ENST00000603858 526 ntBASIC1.27□□□□□ -2.21
RPS28P62857 AC007619.2-201ENST00000605743 379 ntBASIC1.27□□□□□ -2.21
RPS28P62857 MIR4500HG-205ENST00000606590 579 ntTSL 4 BASIC1.27□□□□□ -2.21
RPS28P62857 AL121652.1-201ENST00000608851 448 ntBASIC1.27□□□□□ -2.21
RPS28P62857 AL138478.1-201ENST00000612252 832 ntBASIC1.27□□□□□ -2.21
RPS28P62857 HTR1DP1-201ENST00000616500 888 ntBASIC1.27□□□□□ -2.21
RPS28P62857 AC090617.9-201ENST00000623751 147 ntBASIC1.27□□□□□ -2.21
RPS28P62857 LINC02211-204ENST00000642024 1070 ntBASIC1.27□□□□□ -2.21
RPS28P62857 ADAM18-201ENST00000265707 2388 ntAPPRIS P3 TSL 1 (best) BASIC1.27□□□□□ -2.21
RPS28P62857 OR1L1-201ENST00000309623 933 ntAPPRIS P1 BASIC1.26□□□□□ -2.21
RPS28P62857 U8.4-201ENST00000363626 134 ntBASIC1.26□□□□□ -2.21
RPS28P62857 ZBTB8OS-202ENST00000373501 598 ntTSL 5 BASIC1.26□□□□□ -2.21
RPS28P62857 OR1L1-202ENST00000373686 1083 ntBASIC1.26□□□□□ -2.21
RPS28P62857 RFPL3S-202ENST00000382086 455 ntAPPRIS ALT2 TSL 2 BASIC1.26□□□□□ -2.21
RPS28P62857 SNORA7.4-201ENST00000384249 137 ntBASIC1.26□□□□□ -2.21
RPS28P62857 RNU6-40P-201ENST00000384254 107 ntBASIC1.26□□□□□ -2.21
RPS28P62857 SNORA36C-201ENST00000384289 132 ntBASIC1.26□□□□□ -2.21
RPS28P62857 SNORA17A-201ENST00000391185 133 ntBASIC1.26□□□□□ -2.21
RPS28P62857 RPL23AP29-201ENST00000397284 453 ntBASIC1.26□□□□□ -2.21
RPS28P62857 AC005529.1-201ENST00000411969 289 ntTSL 5 BASIC1.26□□□□□ -2.21
RPS28P62857 BPY2DP-201ENST00000422208 265 ntBASIC1.26□□□□□ -2.21
RPS28P62857 AL359853.3-201ENST00000423879 544 ntTSL 1 (best) BASIC1.26□□□□□ -2.21
RPS28P62857 AC004870.4-201ENST00000424359 360 ntTSL 2 BASIC1.26□□□□□ -2.21
RPS28P62857 DNAJC19P7-201ENST00000428811 344 ntBASIC1.26□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 106.2 ms