Protein–RNA interactions for Protein: P61011

SRP54, Signal recognition particle 54 kDa protein, humanhuman

Known RBP Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54P61011 RPL35AP12-201ENST00000425362 338 ntBASIC3.07□□□□□ -1.92
SRP54P61011 NANOGNBP1-201ENST00000448444 480 ntBASIC3.07□□□□□ -1.92
SRP54P61011 USP9YP25-201ENST00000457708 443 ntBASIC3.07□□□□□ -1.92
SRP54P61011 PTPRG-AS1-202ENST00000466893 823 ntTSL 4 BASIC3.07□□□□□ -1.92
SRP54P61011 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC3.07□□□□□ -1.92
SRP54P61011 AC095057.2-201ENST00000515422 553 ntTSL 4 BASIC3.07□□□□□ -1.92
SRP54P61011 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC3.07□□□□□ -1.92
SRP54P61011 AC104027.1-201ENST00000521887 300 ntBASIC3.07□□□□□ -1.92
SRP54P61011 MAL2-206ENST00000522187 547 ntTSL 4 BASIC3.07□□□□□ -1.92
SRP54P61011 CASP1P1-201ENST00000526345 212 ntBASIC3.07□□□□□ -1.92
SRP54P61011 C11orf1-204ENST00000530214 599 ntTSL 5 BASIC3.07□□□□□ -1.92
SRP54P61011 AC007619.1-201ENST00000544086 412 ntTSL 5 BASIC3.07□□□□□ -1.92
SRP54P61011 TIMM9-208ENST00000556007 746 ntTSL 3 BASIC3.07□□□□□ -1.92
SRP54P61011 MTND4P33-201ENST00000556706 766 ntBASIC3.07□□□□□ -1.92
SRP54P61011 HMGB1P14-201ENST00000557424 591 ntBASIC3.07□□□□□ -1.92
SRP54P61011 AC113146.1-202ENST00000560259 433 ntTSL 5 BASIC3.07□□□□□ -1.92
SRP54P61011 AC130371.1-204ENST00000576197 401 ntTSL 3 BASIC3.07□□□□□ -1.92
SRP54P61011 AC092296.3-201ENST00000589968 249 ntTSL 3 BASIC3.07□□□□□ -1.92
SRP54P61011 AC091057.2-201ENST00000602594 792 ntBASIC3.07□□□□□ -1.92
SRP54P61011 AC068313.1-201ENST00000604028 1008 ntBASIC3.07□□□□□ -1.92
SRP54P61011 AC144521.1-201ENST00000607148 956 ntBASIC3.07□□□□□ -1.92
SRP54P61011 AC009974.1-201ENST00000608881 455 ntBASIC3.07□□□□□ -1.92
SRP54P61011 AC090132.2-201ENST00000615881 347 ntBASIC3.07□□□□□ -1.92
SRP54P61011 ATP5A1P2-202ENST00000616464 443 ntBASIC3.07□□□□□ -1.92
SRP54P61011 AC091046.2-201ENST00000620775 665 ntBASIC3.07□□□□□ -1.92
SRP54P61011 AC009268.2-201ENST00000621925 457 ntBASIC3.07□□□□□ -1.92
SRP54P61011 AC079228.1-201ENST00000624774 1049 ntBASIC3.07□□□□□ -1.92
SRP54P61011 SEC23A-215ENST00000625395 261 ntTSL 5 BASIC3.07□□□□□ -1.92
SRP54P61011 AC084035.1-201ENST00000634543 607 ntBASIC3.07□□□□□ -1.92
SRP54P61011 ATF2-221ENST00000538946 1325 ntTSL 5 BASIC3.07□□□□□ -1.92
SRP54P61011 FILIP1L-206ENST00000471562 2854 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
SRP54P61011 KIAA0825-203ENST00000513200 4942 ntTSL 5 BASIC3.07□□□□□ -1.92
SRP54P61011 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
SRP54P61011 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
SRP54P61011 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC3.06□□□□□ -1.92
SRP54P61011 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC3.06□□□□□ -1.92
SRP54P61011 RNU6-462P-201ENST00000362659 105 ntBASIC3.06□□□□□ -1.92
SRP54P61011 SNORA71.1-201ENST00000364523 117 ntBASIC3.06□□□□□ -1.92
SRP54P61011 GPR183-201ENST00000376414 1700 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
SRP54P61011 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC3.06□□□□□ -1.92
SRP54P61011 RNU6-637P-201ENST00000384050 107 ntBASIC3.06□□□□□ -1.92
SRP54P61011 SNORA36C-201ENST00000384289 132 ntBASIC3.06□□□□□ -1.92
SRP54P61011 RNA5SP252-201ENST00000391131 119 ntBASIC3.06□□□□□ -1.92
SRP54P61011 LINC01934-201ENST00000414750 391 ntTSL 3 BASIC3.06□□□□□ -1.92
SRP54P61011 AL391704.1-203ENST00000414903 462 ntTSL 3 BASIC3.06□□□□□ -1.92
SRP54P61011 AC083875.1-201ENST00000419509 405 ntBASIC3.06□□□□□ -1.92
SRP54P61011 AL109947.1-201ENST00000423747 382 ntTSL 2 BASIC3.06□□□□□ -1.92
SRP54P61011 TXNL1P1-201ENST00000429528 554 ntBASIC3.06□□□□□ -1.92
SRP54P61011 TAAR7P-201ENST00000436141 242 ntBASIC3.06□□□□□ -1.92
SRP54P61011 ZNF385D-AS2-201ENST00000436306 424 ntTSL 5 BASIC3.06□□□□□ -1.92
SRP54P61011 AC112653.1-201ENST00000443851 386 ntBASIC3.06□□□□□ -1.92
SRP54P61011 LINC00529-201ENST00000443854 241 ntTSL 2 BASIC3.06□□□□□ -1.92
SRP54P61011 AC092155.1-201ENST00000444672 573 ntTSL 4 BASIC3.06□□□□□ -1.92
SRP54P61011 AC016696.1-201ENST00000446949 318 ntBASIC3.06□□□□□ -1.92
SRP54P61011 SETP11-201ENST00000473027 690 ntBASIC3.06□□□□□ -1.92
SRP54P61011 RPS3AP14-201ENST00000483907 780 ntBASIC3.06□□□□□ -1.92
SRP54P61011 HMGB1P36-201ENST00000487709 576 ntBASIC3.06□□□□□ -1.92
SRP54P61011 GTF2IP9-201ENST00000502460 301 ntBASIC3.06□□□□□ -1.92
SRP54P61011 AC025465.2-201ENST00000502809 608 ntTSL 2 BASIC3.06□□□□□ -1.92
SRP54P61011 TPT1P8-201ENST00000510120 555 ntBASIC3.06□□□□□ -1.92
SRP54P61011 SCARNA15.2-201ENST00000516409 127 ntBASIC3.06□□□□□ -1.92
SRP54P61011 AC009812.2-201ENST00000517657 457 ntBASIC3.06□□□□□ -1.92
SRP54P61011 MTERF3-203ENST00000522822 1148 ntTSL 2 BASIC3.06□□□□□ -1.92
SRP54P61011 OR5G4P-201ENST00000525251 760 ntBASIC3.06□□□□□ -1.92
SRP54P61011 LINC02294-201ENST00000549330 497 ntTSL 2 BASIC3.06□□□□□ -1.92
SRP54P61011 AL356022.1-201ENST00000557465 483 ntTSL 5 BASIC3.06□□□□□ -1.92
SRP54P61011 MAFTRR-204ENST00000568389 506 ntTSL 4 BASIC3.06□□□□□ -1.92
SRP54P61011 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC3.06□□□□□ -1.92
SRP54P61011 ZRANB2-AS2-213ENST00000591654 719 ntTSL 5 BASIC3.06□□□□□ -1.92
SRP54P61011 HNRNPDLP4-201ENST00000605144 301 ntBASIC3.06□□□□□ -1.92
SRP54P61011 AC007349.4-201ENST00000608114 532 ntBASIC3.06□□□□□ -1.92
SRP54P61011 OR5H6-201ENST00000615035 1113 ntAPPRIS P1 BASIC3.06□□□□□ -1.92
SRP54P61011 AC013470.4-201ENST00000619978 986 ntBASIC3.06□□□□□ -1.92
SRP54P61011 AP000484.1-201ENST00000620067 1252 ntBASIC3.06□□□□□ -1.92
SRP54P61011 AC006927.4-201ENST00000639187 543 ntBASIC3.06□□□□□ -1.92
SRP54P61011 EVI2A-201ENST00000247270 1860 ntAPPRIS P3 TSL 2 BASIC3.05□□□□□ -1.92
SRP54P61011 ANKRD26P2-201ENST00000445530 1710 ntBASIC3.05□□□□□ -1.92
SRP54P61011 TOPORSLP1-203ENST00000493279 2871 ntTSL 4 BASIC3.05□□□□□ -1.92
SRP54P61011 RNU6-289P-201ENST00000364093 107 ntBASIC3.05□□□□□ -1.92
SRP54P61011 MIR514A1-201ENST00000385133 98 ntBASIC3.05□□□□□ -1.92
SRP54P61011 ERMN-204ENST00000409925 556 ntTSL 4 BASIC3.05□□□□□ -1.92
SRP54P61011 RN7SKP220-201ENST00000410611 288 ntBASIC3.05□□□□□ -1.92
SRP54P61011 MTND1P21-201ENST00000412991 285 ntBASIC3.05□□□□□ -1.92
SRP54P61011 ELF3-AS1-201ENST00000415582 500 ntTSL 2 BASIC3.05□□□□□ -1.92
SRP54P61011 TRBV24OR9-2-201ENST00000416632 435 ntBASIC3.05□□□□□ -1.92
SRP54P61011 GRM7-AS3-202ENST00000417482 454 ntTSL 3 BASIC3.05□□□□□ -1.92
SRP54P61011 AC017074.1-201ENST00000424612 561 ntTSL 3 BASIC3.05□□□□□ -1.92
SRP54P61011 AC092573.2-201ENST00000434546 243 ntBASIC3.05□□□□□ -1.92
SRP54P61011 LINC01688-201ENST00000435492 259 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
SRP54P61011 AC097347.1-201ENST00000438499 517 ntTSL 3 BASIC3.05□□□□□ -1.92
SRP54P61011 LINC01986-201ENST00000440867 590 ntTSL 5 BASIC3.05□□□□□ -1.92
SRP54P61011 COX6CP2-201ENST00000444980 225 ntBASIC3.05□□□□□ -1.92
SRP54P61011 AC009237.8-201ENST00000445492 379 ntBASIC3.05□□□□□ -1.92
SRP54P61011 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC3.05□□□□□ -1.92
SRP54P61011 LINC01445-202ENST00000458615 679 ntTSL 2 BASIC3.05□□□□□ -1.92
SRP54P61011 RN7SL499P-201ENST00000481141 276 ntBASIC3.05□□□□□ -1.92
SRP54P61011 AHI1-208ENST00000488690 712 ntTSL 5 BASIC3.05□□□□□ -1.92
SRP54P61011 AP001025.2-201ENST00000490908 477 ntBASIC3.05□□□□□ -1.92
SRP54P61011 AC093281.2-201ENST00000510153 597 ntBASIC3.05□□□□□ -1.92
SRP54P61011 AC139720.2-201ENST00000514766 440 ntTSL 2 BASIC3.05□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 128.8 ms