Protein–RNA interactions for Protein: P53667

LIMK1, LIM domain kinase 1, humanhuman

Predictions only

Length 647 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1P53667 CD2-201ENST00000369477 478 ntTSL 2 BASIC3.43□□□□□ -1.86
LIMK1P53667 CD24P4-201ENST00000382840 243 ntBASIC3.43□□□□□ -1.86
LIMK1P53667 C1D-204ENST00000410067 736 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
LIMK1P53667 DBIP2-201ENST00000419076 262 ntBASIC3.43□□□□□ -1.86
LIMK1P53667 MTND4P20-201ENST00000424125 869 ntBASIC3.43□□□□□ -1.86
LIMK1P53667 RPL27AP8-201ENST00000424277 446 ntBASIC3.43□□□□□ -1.86
LIMK1P53667 AC024082.2-201ENST00000434771 238 ntBASIC3.43□□□□□ -1.86
LIMK1P53667 AC022537.1-201ENST00000435271 446 ntTSL 3 BASIC3.43□□□□□ -1.86
LIMK1P53667 UBE2FP3-201ENST00000436366 524 ntBASIC3.43□□□□□ -1.86
LIMK1P53667 AL139237.2-201ENST00000438454 493 ntTSL 3 BASIC3.43□□□□□ -1.86
LIMK1P53667 AC007003.1-202ENST00000439318 349 ntTSL 5 BASIC3.43□□□□□ -1.86
LIMK1P53667 AL606662.1-201ENST00000445763 553 ntBASIC3.43□□□□□ -1.86
LIMK1P53667 Z75741.1-201ENST00000446793 314 ntBASIC3.43□□□□□ -1.86
LIMK1P53667 KC877373.1-201ENST00000479066 408 ntBASIC3.43□□□□□ -1.86
LIMK1P53667 AC080014.1-201ENST00000496877 1201 ntBASIC3.43□□□□□ -1.86
LIMK1P53667 CBX3P3-201ENST00000508108 532 ntBASIC3.43□□□□□ -1.86
LIMK1P53667 TEMN3-AS1-201ENST00000510211 401 ntTSL 3 BASIC3.43□□□□□ -1.86
LIMK1P53667 AC109454.3-201ENST00000512748 669 ntTSL 3 BASIC3.43□□□□□ -1.86
LIMK1P53667 AC005150.1-201ENST00000512831 628 ntTSL 2 BASIC3.43□□□□□ -1.86
LIMK1P53667 RNA5SP208-201ENST00000516156 78 ntBASIC3.43□□□□□ -1.86
LIMK1P53667 IGKV2-26-201ENST00000518305 343 ntBASIC3.43□□□□□ -1.86
LIMK1P53667 NAP1L1P1-201ENST00000524793 1063 ntBASIC3.43□□□□□ -1.86
LIMK1P53667 AC087276.1-201ENST00000529659 480 ntBASIC3.43□□□□□ -1.86
LIMK1P53667 AP004247.1-201ENST00000531556 1289 ntBASIC3.43□□□□□ -1.86
LIMK1P53667 LINC02460-201ENST00000543558 536 ntTSL 4 BASIC3.43□□□□□ -1.86
LIMK1P53667 AC023161.2-201ENST00000551218 780 ntBASIC3.43□□□□□ -1.86
LIMK1P53667 AL157955.1-201ENST00000554433 331 ntTSL 3 BASIC3.43□□□□□ -1.86
LIMK1P53667 LINC00640-203ENST00000556479 576 ntTSL 2 BASIC3.43□□□□□ -1.86
LIMK1P53667 LINC01584-203ENST00000567231 646 ntTSL 5 BASIC3.43□□□□□ -1.86
LIMK1P53667 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC3.43□□□□□ -1.86
LIMK1P53667 VN1R90P-201ENST00000595717 726 ntBASIC3.43□□□□□ -1.86
LIMK1P53667 AP001429.1-201ENST00000602568 530 ntBASIC3.43□□□□□ -1.86
LIMK1P53667 AC004832.5-201ENST00000608677 401 ntBASIC3.43□□□□□ -1.86
LIMK1P53667 MIR6715A-201ENST00000615929 79 ntBASIC3.43□□□□□ -1.86
LIMK1P53667 AL732618.1-201ENST00000623251 301 ntBASIC3.43□□□□□ -1.86
LIMK1P53667 AC110801.1-201ENST00000623590 212 ntBASIC3.43□□□□□ -1.86
LIMK1P53667 AC097520.1-201ENST00000624435 385 ntBASIC3.43□□□□□ -1.86
LIMK1P53667 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC3.43□□□□□ -1.86
LIMK1P53667 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
LIMK1P53667 AC073073.2-201ENST00000609827 2578 ntBASIC3.43□□□□□ -1.86
LIMK1P53667 TEX30-201ENST00000376019 1689 ntTSL 2 BASIC3.43□□□□□ -1.86
LIMK1P53667 AC092447.10-201ENST00000620607 1652 ntBASIC3.43□□□□□ -1.86
LIMK1P53667 BIRC3-206ENST00000532808 4238 ntAPPRIS P1 TSL 5 BASIC3.43□□□□□ -1.86
LIMK1P53667 MFSD8-233ENST00000641482 4860 ntBASIC3.42□□□□□ -1.86
LIMK1P53667 PMCH-201ENST00000329406 766 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
LIMK1P53667 RNU6-433P-201ENST00000363216 104 ntBASIC3.42□□□□□ -1.86
LIMK1P53667 RNU6-799P-201ENST00000363567 107 ntBASIC3.42□□□□□ -1.86
LIMK1P53667 SNORA5B-201ENST00000363786 132 ntBASIC3.42□□□□□ -1.86
LIMK1P53667 RNU6-359P-201ENST00000365466 108 ntBASIC3.42□□□□□ -1.86
LIMK1P53667 RNU6-114P-201ENST00000384704 105 ntBASIC3.42□□□□□ -1.86
LIMK1P53667 AL136372.1-201ENST00000403060 228 ntBASIC3.42□□□□□ -1.86
LIMK1P53667 RPL5P18-201ENST00000406671 891 ntBASIC3.42□□□□□ -1.86
LIMK1P53667 RN7SKP266-201ENST00000410232 287 ntBASIC3.42□□□□□ -1.86
LIMK1P53667 BX323014.1-201ENST00000412876 237 ntBASIC3.42□□□□□ -1.86
LIMK1P53667 AC004543.1-201ENST00000418764 369 ntTSL 5 BASIC3.42□□□□□ -1.86
LIMK1P53667 AL160272.1-201ENST00000421509 521 ntTSL 3 BASIC3.42□□□□□ -1.86
LIMK1P53667 NBDY-202ENST00000423617 543 ntAPPRIS P1 TSL 2 BASIC3.42□□□□□ -1.86
LIMK1P53667 AL022396.1-201ENST00000427011 386 ntTSL 3 BASIC3.42□□□□□ -1.86
LIMK1P53667 AL596220.1-202ENST00000429768 314 ntTSL 3 BASIC3.42□□□□□ -1.86
LIMK1P53667 AL158071.1-201ENST00000430315 461 ntBASIC3.42□□□□□ -1.86
LIMK1P53667 AL353705.1-201ENST00000433468 480 ntBASIC3.42□□□□□ -1.86
LIMK1P53667 TXNP1-201ENST00000441872 371 ntBASIC3.42□□□□□ -1.86
LIMK1P53667 NUTM2A-AS1-209ENST00000447424 571 ntTSL 3 BASIC3.42□□□□□ -1.86
LIMK1P53667 AL592447.1-201ENST00000447592 540 ntBASIC3.42□□□□□ -1.86
LIMK1P53667 AP000542.1-201ENST00000448473 371 ntBASIC3.42□□□□□ -1.86
LIMK1P53667 SNORD121B-201ENST00000458838 81 ntBASIC3.42□□□□□ -1.86
LIMK1P53667 LINC02122-201ENST00000511395 577 ntTSL 4 BASIC3.42□□□□□ -1.86
LIMK1P53667 LINC02112-202ENST00000512976 464 ntTSL 3 BASIC3.42□□□□□ -1.86
LIMK1P53667 AC026801.2-201ENST00000515352 425 ntBASIC3.42□□□□□ -1.86
LIMK1P53667 AC136777.1-201ENST00000517765 369 ntTSL 4 BASIC3.42□□□□□ -1.86
LIMK1P53667 AC068587.4-201ENST00000533893 186 ntBASIC3.42□□□□□ -1.86
LIMK1P53667 AC008011.1-201ENST00000545989 227 ntBASIC3.42□□□□□ -1.86
LIMK1P53667 LINC02300-201ENST00000549742 665 ntTSL 4 BASIC3.42□□□□□ -1.86
LIMK1P53667 AL133166.1-201ENST00000551040 1034 ntTSL 4 BASIC3.42□□□□□ -1.86
LIMK1P53667 AL450442.1-201ENST00000554042 854 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
LIMK1P53667 AC007954.1-201ENST00000554198 494 ntBASIC3.42□□□□□ -1.86
LIMK1P53667 AC008015.1-201ENST00000555505 465 ntBASIC3.42□□□□□ -1.86
LIMK1P53667 AL133368.2-201ENST00000556978 386 ntTSL 3 BASIC3.42□□□□□ -1.86
LIMK1P53667 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC3.42□□□□□ -1.86
LIMK1P53667 AC026474.1-201ENST00000562422 428 ntTSL 2 BASIC3.42□□□□□ -1.86
LIMK1P53667 AC018714.1-201ENST00000605028 208 ntBASIC3.42□□□□□ -1.86
LIMK1P53667 HNRNPDLP4-201ENST00000605144 301 ntBASIC3.42□□□□□ -1.86
LIMK1P53667 AC107214.2-201ENST00000608204 634 ntBASIC3.42□□□□□ -1.86
LIMK1P53667 AP002826.1-201ENST00000608835 315 ntBASIC3.42□□□□□ -1.86
LIMK1P53667 AC079597.1-201ENST00000624306 508 ntBASIC3.42□□□□□ -1.86
LIMK1P53667 AL359757.2-201ENST00000624309 274 ntBASIC3.42□□□□□ -1.86
LIMK1P53667 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC3.42□□□□□ -1.86
LIMK1P53667 APAF1-208ENST00000549007 3492 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
LIMK1P53667 TOPORSLP1-203ENST00000493279 2871 ntTSL 4 BASIC3.42□□□□□ -1.86
LIMK1P53667 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
LIMK1P53667 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
LIMK1P53667 TAB3P1-202ENST00000452645 1634 ntBASIC3.41□□□□□ -1.86
LIMK1P53667 FAM35BP-202ENST00000497389 3337 ntBASIC3.41□□□□□ -1.86
LIMK1P53667 TMCO5A-203ENST00000558158 2894 ntAPPRIS ALT2 TSL 3 BASIC3.41□□□□□ -1.86
LIMK1P53667 MIR422A-201ENST00000362286 90 ntBASIC3.41□□□□□ -1.86
LIMK1P53667 AF228730.1-201ENST00000397972 663 ntBASIC3.41□□□□□ -1.86
LIMK1P53667 SKINT1L-201ENST00000401057 817 ntBASIC3.41□□□□□ -1.86
LIMK1P53667 RPA3-203ENST00000401447 414 ntTSL 3 BASIC3.41□□□□□ -1.86
LIMK1P53667 AL139095.1-201ENST00000404326 391 ntBASIC3.41□□□□□ -1.86
LIMK1P53667 MIR1305-201ENST00000408300 86 ntBASIC3.41□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 108.6 ms