Protein–RNA interactions for Protein: P52948

NUP98, Nuclear pore complex protein Nup98-Nup96, humanhuman

Predictions only

Length 1,817 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98P52948 RERG-IT1-201ENST00000539734 301 ntTSL 3 BASIC2.05□□□□□ -2.08
NUP98P52948 LIVAR-201ENST00000578633 384 ntTSL 3 BASIC2.05□□□□□ -2.08
NUP98P52948 MIR4781-201ENST00000585250 76 ntBASIC2.05□□□□□ -2.08
NUP98P52948 AC020895.1-201ENST00000595362 272 ntBASIC2.05□□□□□ -2.08
NUP98P52948 AL355812.1-201ENST00000603215 216 ntBASIC2.05□□□□□ -2.08
NUP98P52948 LINC02246-204ENST00000625278 740 ntTSL 5 BASIC2.05□□□□□ -2.08
NUP98P52948 AC119674.1-220ENST00000641502 1048 ntBASIC2.05□□□□□ -2.08
NUP98P52948 SPAM1-205ENST00000439500 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC2.05□□□□□ -2.08
NUP98P52948 ATP8A2P2-201ENST00000437678 1568 ntBASIC2.05□□□□□ -2.08
NUP98P52948 EVI2A-201ENST00000247270 1860 ntAPPRIS P3 TSL 2 BASIC2.05□□□□□ -2.08
NUP98P52948 Z98749.2-208ENST00000381646 500 ntBASIC2.05□□□□□ -2.08
NUP98P52948 CD24P4-201ENST00000382840 243 ntBASIC2.05□□□□□ -2.08
NUP98P52948 RNU6-837P-201ENST00000391056 108 ntBASIC2.05□□□□□ -2.08
NUP98P52948 AL358972.1-201ENST00000434356 466 ntTSL 2 BASIC2.05□□□□□ -2.08
NUP98P52948 ARPC3P1-201ENST00000437218 533 ntBASIC2.05□□□□□ -2.08
NUP98P52948 AC107398.1-201ENST00000486904 505 ntBASIC2.05□□□□□ -2.08
NUP98P52948 AC007375.1-201ENST00000554513 578 ntBASIC2.05□□□□□ -2.08
NUP98P52948 AC003009.1-201ENST00000571611 686 ntTSL 3 BASIC2.05□□□□□ -2.08
NUP98P52948 AC103987.3-201ENST00000582071 292 ntBASIC2.05□□□□□ -2.08
NUP98P52948 C8orf59-209ENST00000612977 586 ntAPPRIS P1 TSL 2 BASIC2.05□□□□□ -2.08
NUP98P52948 COPS2-203ENST00000542928 1580 ntTSL 2 BASIC2.04□□□□□ -2.08
NUP98P52948 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC2.04□□□□□ -2.08
NUP98P52948 AC010967.2-201ENST00000418451 333 ntTSL 2 BASIC2.04□□□□□ -2.08
NUP98P52948 ABCC5-AS1-201ENST00000422946 469 ntTSL 2 BASIC2.04□□□□□ -2.08
NUP98P52948 HMGN2P30-201ENST00000423237 256 ntBASIC2.04□□□□□ -2.08
NUP98P52948 AL591475.1-201ENST00000429060 489 ntTSL 2 BASIC2.04□□□□□ -2.08
NUP98P52948 AC010273.2-201ENST00000479830 438 ntTSL 5 BASIC2.04□□□□□ -2.08
NUP98P52948 AC109464.2-201ENST00000510242 943 ntBASIC2.04□□□□□ -2.08
NUP98P52948 AC105914.1-201ENST00000511798 226 ntBASIC2.04□□□□□ -2.08
NUP98P52948 AC015468.3-201ENST00000518967 417 ntTSL 2 BASIC2.04□□□□□ -2.08
NUP98P52948 AP001021.1-201ENST00000577704 244 ntTSL 3 BASIC2.04□□□□□ -2.08
NUP98P52948 AL049779.4-201ENST00000604500 156 ntBASIC2.04□□□□□ -2.08
NUP98P52948 AC008083.4-201ENST00000615076 444 ntBASIC2.04□□□□□ -2.08
NUP98P52948 AC010976.1-210ENST00000630740 1005 ntTSL 5 BASIC2.04□□□□□ -2.08
NUP98P52948 PSMD5-AS1-215ENST00000640622 205 ntBASIC2.04□□□□□ -2.08
NUP98P52948 AGTR1-206ENST00000474935 1795 ntAPPRIS P1 TSL 3 BASIC2.04□□□□□ -2.08
NUP98P52948 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC2.04□□□□□ -2.08
NUP98P52948 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC2.04□□□□□ -2.08
NUP98P52948 RNU6-1249P-201ENST00000363237 111 ntBASIC2.03□□□□□ -2.08
NUP98P52948 RNU6-670P-201ENST00000364312 104 ntBASIC2.03□□□□□ -2.08
NUP98P52948 Y_RNA.238-201ENST00000364441 102 ntBASIC2.03□□□□□ -2.08
NUP98P52948 DPYD-AS2-201ENST00000422259 788 ntTSL 3 BASIC2.03□□□□□ -2.08
NUP98P52948 AC114973.1-201ENST00000429057 632 ntBASIC2.03□□□□□ -2.08
NUP98P52948 AL138830.2-202ENST00000446358 786 ntTSL 2 BASIC2.03□□□□□ -2.08
NUP98P52948 TPT1P14-201ENST00000448018 505 ntBASIC2.03□□□□□ -2.08
NUP98P52948 SNRPFP4-201ENST00000456366 242 ntBASIC2.03□□□□□ -2.08
NUP98P52948 LINC01455-201ENST00000503167 561 ntTSL 4 BASIC2.03□□□□□ -2.08
NUP98P52948 AC025459.1-201ENST00000504072 156 ntBASIC2.03□□□□□ -2.08
NUP98P52948 AC109471.1-201ENST00000511631 612 ntBASIC2.03□□□□□ -2.08
NUP98P52948 CASP1-212ENST00000531166 300 ntTSL 5 BASIC2.03□□□□□ -2.08
NUP98P52948 AP005433.1-201ENST00000582939 620 ntTSL 2 BASIC2.03□□□□□ -2.08
NUP98P52948 HSPE1P14-201ENST00000605812 302 ntBASIC2.03□□□□□ -2.08
NUP98P52948 AC012360.2-201ENST00000609349 391 ntBASIC2.03□□□□□ -2.08
NUP98P52948 AC007275.1-201ENST00000621243 671 ntBASIC2.03□□□□□ -2.08
NUP98P52948 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC2.03□□□□□ -2.08
NUP98P52948 NUCB2-220ENST00000622082 1369 ntAPPRIS P2 TSL 5 BASIC2.03□□□□□ -2.08
NUP98P52948 RNU6-819P-201ENST00000364116 107 ntBASIC2.03□□□□□ -2.09
NUP98P52948 CUBN-201ENST00000377823 705 ntTSL 3 BASIC2.03□□□□□ -2.09
NUP98P52948 RNU6-1027P-201ENST00000383998 107 ntBASIC2.03□□□□□ -2.09
NUP98P52948 PRRC2CP1-201ENST00000404428 159 ntBASIC2.03□□□□□ -2.09
NUP98P52948 AC096533.1-201ENST00000411645 353 ntBASIC2.03□□□□□ -2.09
NUP98P52948 AP000695.2-201ENST00000428667 715 ntTSL 5 BASIC2.03□□□□□ -2.09
NUP98P52948 FKBP7-205ENST00000434643 666 ntAPPRIS ALT2 TSL 1 (best) BASIC2.03□□□□□ -2.09
NUP98P52948 AL513321.1-201ENST00000441175 761 ntBASIC2.03□□□□□ -2.09
NUP98P52948 AL031183.1-201ENST00000457667 207 ntBASIC2.03□□□□□ -2.09
NUP98P52948 AC010285.1-201ENST00000470580 392 ntBASIC2.03□□□□□ -2.09
NUP98P52948 AC104803.1-201ENST00000506917 529 ntTSL 3 BASIC2.03□□□□□ -2.09
NUP98P52948 AC093879.2-201ENST00000513645 427 ntTSL 3 BASIC2.03□□□□□ -2.09
NUP98P52948 SNORA31.20-201ENST00000517111 133 ntBASIC2.03□□□□□ -2.09
NUP98P52948 LY96-202ENST00000518893 430 ntTSL 3 BASIC2.03□□□□□ -2.09
NUP98P52948 AC091814.1-201ENST00000545258 719 ntTSL 3 BASIC2.03□□□□□ -2.09
NUP98P52948 AC007906.1-201ENST00000568648 510 ntTSL 5 BASIC2.03□□□□□ -2.09
NUP98P52948 MIR4446-201ENST00000578505 67 ntBASIC2.03□□□□□ -2.09
NUP98P52948 AL133507.1-201ENST00000605269 557 ntBASIC2.03□□□□□ -2.09
NUP98P52948 BNIP3P7-201ENST00000605641 516 ntBASIC2.03□□□□□ -2.09
NUP98P52948 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC2.02□□□□□ -2.09
NUP98P52948 RNU6-1243P-201ENST00000364028 107 ntBASIC2.02□□□□□ -2.09
NUP98P52948 RNU6-1180P-201ENST00000364935 107 ntBASIC2.02□□□□□ -2.09
NUP98P52948 HMGB3P2-201ENST00000411913 584 ntBASIC2.02□□□□□ -2.09
NUP98P52948 AC233728.2-201ENST00000425348 757 ntBASIC2.02□□□□□ -2.09
NUP98P52948 AL031659.1-201ENST00000447075 539 ntBASIC2.02□□□□□ -2.09
NUP98P52948 AC006148.2-201ENST00000467017 650 ntTSL 2 BASIC2.02□□□□□ -2.09
NUP98P52948 AC069528.1-202ENST00000482888 637 ntBASIC2.02□□□□□ -2.09
NUP98P52948 AC005840.1-201ENST00000498412 377 ntBASIC2.02□□□□□ -2.09
NUP98P52948 AC009901.1-201ENST00000506703 541 ntBASIC2.02□□□□□ -2.09
NUP98P52948 AC008885.2-201ENST00000509506 930 ntBASIC2.02□□□□□ -2.09
NUP98P52948 CNBD1-202ENST00000518476 1594 ntAPPRIS P2 TSL 1 (best) BASIC2.02□□□□□ -2.09
NUP98P52948 AC087373.1-201ENST00000524920 491 ntBASIC2.02□□□□□ -2.09
NUP98P52948 SNRPGP16-201ENST00000533275 226 ntBASIC2.02□□□□□ -2.09
NUP98P52948 LINC02305-201ENST00000554142 476 ntTSL 3 BASIC2.02□□□□□ -2.09
NUP98P52948 AC107982.2-201ENST00000577360 463 ntTSL 5 BASIC2.02□□□□□ -2.09
NUP98P52948 AC091057.2-201ENST00000602594 792 ntBASIC2.02□□□□□ -2.09
NUP98P52948 FO624990.1-201ENST00000636373 85 ntBASIC2.02□□□□□ -2.09
NUP98P52948 JCHAIN-206ENST00000543780 1406 ntAPPRIS P1 TSL 1 (best) BASIC2.01□□□□□ -2.09
NUP98P52948 STATH-201ENST00000246895 598 ntAPPRIS P1 TSL 1 (best) BASIC2.01□□□□□ -2.09
NUP98P52948 RNY1P10-201ENST00000363268 113 ntBASIC2.01□□□□□ -2.09
NUP98P52948 Y_RNA.118-201ENST00000363300 101 ntBASIC2.01□□□□□ -2.09
NUP98P52948 SNORD56.5-201ENST00000364281 72 ntBASIC2.01□□□□□ -2.09
NUP98P52948 EEF1E1-BLOC1S5-201ENST00000397456 768 ntAPPRIS P1 TSL 3 BASIC2.01□□□□□ -2.09
NUP98P52948 AC092638.1-201ENST00000411966 1275 ntBASIC2.01□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 93.3 ms