Protein–RNA interactions for Protein: P52655

GTF2A1, Transcription initiation factor IIA subunit 1, humanhuman

Predicted RBP Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1P52655 AC025857.1-201ENST00000525252 377 ntBASIC1.88□□□□□ -2.11
GTF2A1P52655 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC1.88□□□□□ -2.11
GTF2A1P52655 AC087897.2-201ENST00000552639 678 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
GTF2A1P52655 TIMM9-203ENST00000555061 598 ntAPPRIS P1 TSL 1 (best) BASIC1.88□□□□□ -2.11
GTF2A1P52655 AC090616.5-201ENST00000581225 299 ntTSL 5 BASIC1.88□□□□□ -2.11
GTF2A1P52655 UBE2L4-201ENST00000587688 464 ntBASIC1.88□□□□□ -2.11
GTF2A1P52655 AC024023.1-201ENST00000624530 922 ntBASIC1.88□□□□□ -2.11
GTF2A1P52655 AP001002.2-201ENST00000625137 386 ntBASIC1.88□□□□□ -2.11
GTF2A1P52655 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC1.88□□□□□ -2.11
GTF2A1P52655 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC1.88□□□□□ -2.11
GTF2A1P52655 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC1.87□□□□□ -2.11
GTF2A1P52655 MORN2-203ENST00000409131 544 ntTSL 5 BASIC1.87□□□□□ -2.11
GTF2A1P52655 RNA5SP270-201ENST00000411361 118 ntBASIC1.87□□□□□ -2.11
GTF2A1P52655 FCF1P2-201ENST00000415284 583 ntBASIC1.87□□□□□ -2.11
GTF2A1P52655 AC099677.1-201ENST00000420575 175 ntBASIC1.87□□□□□ -2.11
GTF2A1P52655 AL451062.2-201ENST00000427515 271 ntBASIC1.87□□□□□ -2.11
GTF2A1P52655 AL353612.1-201ENST00000428769 465 ntTSL 3 BASIC1.87□□□□□ -2.11
GTF2A1P52655 OR5H14-201ENST00000437310 1080 ntAPPRIS P1 BASIC1.87□□□□□ -2.11
GTF2A1P52655 AC004383.1-201ENST00000438135 289 ntBASIC1.87□□□□□ -2.11
GTF2A1P52655 MTCYBP3-201ENST00000445588 1137 ntBASIC1.87□□□□□ -2.11
GTF2A1P52655 ZBTB8OS-205ENST00000465588 548 ntTSL 2 BASIC1.87□□□□□ -2.11
GTF2A1P52655 MTND4LP3-201ENST00000468320 276 ntBASIC1.87□□□□□ -2.11
GTF2A1P52655 SETP6-201ENST00000479329 568 ntBASIC1.87□□□□□ -2.11
GTF2A1P52655 AC096576.1-201ENST00000489014 359 ntBASIC1.87□□□□□ -2.11
GTF2A1P52655 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC1.87□□□□□ -2.11
GTF2A1P52655 AC034234.1-202ENST00000508696 339 ntTSL 3 BASIC1.87□□□□□ -2.11
GTF2A1P52655 AC093281.2-201ENST00000510153 597 ntBASIC1.87□□□□□ -2.11
GTF2A1P52655 RNA5SP200-201ENST00000516360 103 ntBASIC1.87□□□□□ -2.11
GTF2A1P52655 AC008676.3-201ENST00000521237 435 ntBASIC1.87□□□□□ -2.11
GTF2A1P52655 CDKL3-207ENST00000521755 586 ntTSL 5 BASIC1.87□□□□□ -2.11
GTF2A1P52655 AC090753.1-201ENST00000522087 331 ntTSL 3 BASIC1.87□□□□□ -2.11
GTF2A1P52655 MYRFL-202ENST00000535034 881 ntTSL 1 (best) BASIC1.87□□□□□ -2.11
GTF2A1P52655 AC012669.1-201ENST00000603209 283 ntBASIC1.87□□□□□ -2.11
GTF2A1P52655 ZFAT-AS1_1.1-201ENST00000620907 79 ntBASIC1.87□□□□□ -2.11
GTF2A1P52655 AC012594.1-272ENST00000625790 710 ntTSL 5 BASIC1.87□□□□□ -2.11
GTF2A1P52655 KTN1-223ENST00000555573 1712 ntTSL 2 BASIC1.86□□□□□ -2.11
GTF2A1P52655 ZNF679-201ENST00000255746 1297 ntAPPRIS P1 TSL 1 (best) BASIC1.86□□□□□ -2.11
GTF2A1P52655 OR1L1-201ENST00000309623 933 ntAPPRIS P1 BASIC1.86□□□□□ -2.11
GTF2A1P52655 OR1L1-202ENST00000373686 1083 ntBASIC1.86□□□□□ -2.11
GTF2A1P52655 CYCSP45-201ENST00000402289 315 ntBASIC1.86□□□□□ -2.11
GTF2A1P52655 RPS3AP24-201ENST00000407896 734 ntBASIC1.86□□□□□ -2.11
GTF2A1P52655 AL161449.1-201ENST00000414531 1199 ntBASIC1.86□□□□□ -2.11
GTF2A1P52655 RPS3AP9-201ENST00000417027 792 ntBASIC1.86□□□□□ -2.11
GTF2A1P52655 AL078590.2-202ENST00000422736 568 ntTSL 3 BASIC1.86□□□□□ -2.11
GTF2A1P52655 EIF4EP4-201ENST00000424916 578 ntBASIC1.86□□□□□ -2.11
GTF2A1P52655 AIMP1P2-201ENST00000425294 312 ntBASIC1.86□□□□□ -2.11
GTF2A1P52655 AC098614.2-201ENST00000426040 255 ntBASIC1.86□□□□□ -2.11
GTF2A1P52655 FO393419.3-201ENST00000428741 282 ntBASIC1.86□□□□□ -2.11
GTF2A1P52655 AC010157.1-201ENST00000440589 527 ntTSL 4 BASIC1.86□□□□□ -2.11
GTF2A1P52655 AL360221.1-201ENST00000445989 335 ntBASIC1.86□□□□□ -2.11
GTF2A1P52655 AC025459.1-201ENST00000504072 156 ntBASIC1.86□□□□□ -2.11
GTF2A1P52655 AC011396.1-201ENST00000507391 312 ntTSL 3 BASIC1.86□□□□□ -2.11
GTF2A1P52655 MGAT4D-203ENST00000511113 1125 ntAPPRIS P2 TSL 5 BASIC1.86□□□□□ -2.11
GTF2A1P52655 C1DP5-201ENST00000525775 383 ntBASIC1.86□□□□□ -2.11
GTF2A1P52655 EIF4BP1-201ENST00000554881 351 ntBASIC1.86□□□□□ -2.11
GTF2A1P52655 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC1.86□□□□□ -2.11
GTF2A1P52655 AC044840.1-201ENST00000577641 472 ntTSL 3 BASIC1.86□□□□□ -2.11
GTF2A1P52655 AC005695.2-201ENST00000579641 259 ntTSL 3 BASIC1.86□□□□□ -2.11
GTF2A1P52655 LARP7P3-201ENST00000579888 337 ntBASIC1.86□□□□□ -2.11
GTF2A1P52655 AL392048.1-201ENST00000613946 534 ntBASIC1.86□□□□□ -2.11
GTF2A1P52655 CTSLP2-204ENST00000629029 392 ntBASIC1.86□□□□□ -2.11
GTF2A1P52655 ITGA9-AS1-218ENST00000630762 751 ntTSL 5 BASIC1.86□□□□□ -2.11
GTF2A1P52655 CPXCR1-201ENST00000276127 1630 ntAPPRIS P1 TSL 1 (best) BASIC1.86□□□□□ -2.11
GTF2A1P52655 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC1.86□□□□□ -2.11
GTF2A1P52655 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC1.85□□□□□ -2.11
GTF2A1P52655 RNA5SP289-201ENST00000362332 137 ntBASIC1.85□□□□□ -2.11
GTF2A1P52655 RNU6-173P-201ENST00000364215 104 ntBASIC1.85□□□□□ -2.11
GTF2A1P52655 MAPK8-202ENST00000374174 739 ntTSL 3 BASIC1.85□□□□□ -2.11
GTF2A1P52655 MIR491-201ENST00000384877 84 ntBASIC1.85□□□□□ -2.11
GTF2A1P52655 SLC9B1P2-201ENST00000398120 1184 ntBASIC1.85□□□□□ -2.11
GTF2A1P52655 RNU2-17P-201ENST00000410290 190 ntBASIC1.85□□□□□ -2.11
GTF2A1P52655 AL357832.1-201ENST00000427460 420 ntTSL 3 BASIC1.85□□□□□ -2.11
GTF2A1P52655 LINC00392-201ENST00000430033 557 ntTSL 3 BASIC1.85□□□□□ -2.11
GTF2A1P52655 AL390879.2-204ENST00000438602 582 ntTSL 3 BASIC1.85□□□□□ -2.11
GTF2A1P52655 AL353689.1-201ENST00000438895 199 ntBASIC1.85□□□□□ -2.11
GTF2A1P52655 MTND2P19-201ENST00000449129 1012 ntBASIC1.85□□□□□ -2.11
GTF2A1P52655 AC117386.2-202ENST00000472821 522 ntTSL 3 BASIC1.85□□□□□ -2.11
GTF2A1P52655 AC126389.1-201ENST00000477436 290 ntBASIC1.85□□□□□ -2.11
GTF2A1P52655 AC072039.1-201ENST00000477611 581 ntBASIC1.85□□□□□ -2.11
GTF2A1P52655 VPS13A-211ENST00000484581 1155 ntTSL 2 BASIC1.85□□□□□ -2.11
GTF2A1P52655 AC073359.1-201ENST00000486545 521 ntTSL 2 BASIC1.85□□□□□ -2.11
GTF2A1P52655 CFAP44-AS1-202ENST00000498480 686 ntTSL 3 BASIC1.85□□□□□ -2.11
GTF2A1P52655 C4orf33-204ENST00000502887 1126 ntTSL 1 (best) BASIC1.85□□□□□ -2.11
GTF2A1P52655 AC008885.2-201ENST00000509506 930 ntBASIC1.85□□□□□ -2.11
GTF2A1P52655 AC118465.1-201ENST00000513820 1271 ntBASIC1.85□□□□□ -2.11
GTF2A1P52655 RNU6-202P-201ENST00000515998 96 ntBASIC1.85□□□□□ -2.11
GTF2A1P52655 SCARNA16.3-201ENST00000516595 184 ntBASIC1.85□□□□□ -2.11
GTF2A1P52655 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC1.85□□□□□ -2.11
GTF2A1P52655 CASP1-212ENST00000531166 300 ntTSL 5 BASIC1.85□□□□□ -2.11
GTF2A1P52655 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC1.85□□□□□ -2.11
GTF2A1P52655 AC005498.1-201ENST00000592125 465 ntBASIC1.85□□□□□ -2.11
GTF2A1P52655 AL355877.2-201ENST00000603670 358 ntBASIC1.85□□□□□ -2.11
GTF2A1P52655 AC126118.1-201ENST00000607744 628 ntBASIC1.85□□□□□ -2.11
GTF2A1P52655 MIR6132-201ENST00000622083 109 ntBASIC1.85□□□□□ -2.11
GTF2A1P52655 AL353748.2-201ENST00000622148 471 ntBASIC1.85□□□□□ -2.11
GTF2A1P52655 AL589740.1-205ENST00000635561 565 ntTSL 5 BASIC1.85□□□□□ -2.11
GTF2A1P52655 CHORDC1-206ENST00000529987 1698 ntTSL 3 BASIC1.85□□□□□ -2.11
GTF2A1P52655 TRIQK-201ENST00000378861 1596 ntAPPRIS P1 TSL 1 (best) BASIC1.85□□□□□ -2.11
GTF2A1P52655 SAMSN1-202ENST00000400564 1382 ntTSL 1 (best) BASIC1.85□□□□□ -2.11
GTF2A1P52655 U3.12-201ENST00000364498 214 ntBASIC1.84□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 79.6 ms