Protein–RNA interactions for Protein: P51784

USP11, Ubiquitin carboxyl-terminal hydrolase 11, humanhuman

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP11P51784 RNU6-188P-201ENST00000364207 107 ntBASIC5.25□□□□□ -1.57
USP11P51784 RNU6-593P-201ENST00000364716 112 ntBASIC5.25□□□□□ -1.57
USP11P51784 SNORA71.2-201ENST00000364941 134 ntBASIC5.25□□□□□ -1.57
USP11P51784 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
USP11P51784 RNU6-1293P-201ENST00000384077 107 ntBASIC5.25□□□□□ -1.57
USP11P51784 SNORA75.6-201ENST00000391318 127 ntBASIC5.25□□□□□ -1.57
USP11P51784 MIR450B-201ENST00000401182 78 ntBASIC5.25□□□□□ -1.57
USP11P51784 RPL7P46-201ENST00000425129 740 ntBASIC5.25□□□□□ -1.57
USP11P51784 CYP1B1-AS1-202ENST00000427168 484 ntTSL 4 BASIC5.25□□□□□ -1.57
USP11P51784 LINC00415-201ENST00000439079 435 ntTSL 3 BASIC5.25□□□□□ -1.57
USP11P51784 SFTA1P-203ENST00000446372 693 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
USP11P51784 DARS-AS1-206ENST00000446492 488 ntTSL 3 BASIC5.25□□□□□ -1.57
USP11P51784 AL162591.2-201ENST00000449634 317 ntBASIC5.25□□□□□ -1.57
USP11P51784 GAS5-223ENST00000452197 483 ntTSL 3 BASIC5.25□□□□□ -1.57
USP11P51784 IGKV2-30-201ENST00000468494 390 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
USP11P51784 HIGD1AP13-201ENST00000509878 289 ntBASIC5.25□□□□□ -1.57
USP11P51784 AC091180.4-201ENST00000511322 245 ntTSL 2 BASIC5.25□□□□□ -1.57
USP11P51784 Y_RNA.670-201ENST00000516255 105 ntBASIC5.25□□□□□ -1.57
USP11P51784 RNU6-1016P-201ENST00000516689 94 ntBASIC5.25□□□□□ -1.57
USP11P51784 AL035078.3-201ENST00000525382 241 ntTSL 3 BASIC5.25□□□□□ -1.57
USP11P51784 AL160237.1-201ENST00000554526 572 ntTSL 4 BASIC5.25□□□□□ -1.57
USP11P51784 LINC02490-201ENST00000559915 601 ntTSL 3 BASIC5.25□□□□□ -1.57
USP11P51784 AC068112.1-201ENST00000580057 346 ntTSL 3 BASIC5.25□□□□□ -1.57
USP11P51784 RASSF8-215ENST00000611440 852 ntTSL 5 BASIC5.25□□□□□ -1.57
USP11P51784 RDM1-215ENST00000612980 501 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
USP11P51784 AC010378.1-201ENST00000619270 362 ntBASIC5.25□□□□□ -1.57
USP11P51784 RNU6-156P-201ENST00000621869 107 ntBASIC5.25□□□□□ -1.57
USP11P51784 LINC00706-201ENST00000628989 699 ntTSL 3 BASIC5.25□□□□□ -1.57
USP11P51784 NABP1-205ENST00000425611 1878 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
USP11P51784 C17orf78-204ENST00000615133 1862 ntAPPRIS P3 TSL 1 (best) BASIC5.25□□□□□ -1.57
USP11P51784 TET2-203ENST00000380013 9679 ntAPPRIS P2 TSL 5 BASIC5.25□□□□□ -1.57
USP11P51784 NECAB1-202ENST00000521366 2908 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
USP11P51784 MTUS1-203ENST00000381861 3996 ntAPPRIS P4 TSL 2 BASIC5.25□□□□□ -1.57
USP11P51784 LYST-202ENST00000389794 12985 ntTSL 5 BASIC5.25□□□□□ -1.57
USP11P51784 PRLR-220ENST00000620785 11063 ntTSL 5 BASIC5.25□□□□□ -1.57
USP11P51784 OR2L3-203ENST00000641649 2846 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
USP11P51784 USP29-202ENST00000598197 3284 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
USP11P51784 PTPN13-201ENST00000316707 7546 ntAPPRIS ALT2 TSL 1 (best) BASIC5.24□□□□□ -1.57
USP11P51784 TCF4-281ENST00000636822 7640 ntTSL 5 BASIC5.24□□□□□ -1.57
USP11P51784 BDP1P-201ENST00000582658 1990 ntBASIC5.24□□□□□ -1.57
USP11P51784 SGIP1-204ENST00000371039 4080 ntAPPRIS ALT2 TSL 1 (best) BASIC5.24□□□□□ -1.57
USP11P51784 MYBPC1-203ENST00000392934 3644 ntAPPRIS ALT2 TSL 2 BASIC5.24□□□□□ -1.57
USP11P51784 AC021146.4-201ENST00000309229 279 ntBASIC5.24□□□□□ -1.57
USP11P51784 TMLHE-202ENST00000369439 1248 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
USP11P51784 RNU6-209P-201ENST00000384118 107 ntBASIC5.24□□□□□ -1.57
USP11P51784 RNU6-398P-201ENST00000384143 109 ntBASIC5.24□□□□□ -1.57
USP11P51784 RNU6ATAC5P-201ENST00000388104 126 ntBASIC5.24□□□□□ -1.57
USP11P51784 AL391417.1-201ENST00000404100 426 ntBASIC5.24□□□□□ -1.57
USP11P51784 FAR2P2-201ENST00000413041 594 ntBASIC5.24□□□□□ -1.57
USP11P51784 AC119751.6-201ENST00000416712 186 ntBASIC5.24□□□□□ -1.57
USP11P51784 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC5.24□□□□□ -1.57
USP11P51784 FAR2P4-202ENST00000425399 584 ntBASIC5.24□□□□□ -1.57
USP11P51784 AL133260.2-201ENST00000445833 396 ntTSL 3 BASIC5.24□□□□□ -1.57
USP11P51784 CYP4F62P-203ENST00000455215 552 ntTSL 4 BASIC5.24□□□□□ -1.57
USP11P51784 LINC01150-201ENST00000455671 315 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
USP11P51784 RNU6ATAC28P-201ENST00000459249 118 ntBASIC5.24□□□□□ -1.57
USP11P51784 HMGB1P21-201ENST00000502313 581 ntBASIC5.24□□□□□ -1.57
USP11P51784 KRTAP5-14P-201ENST00000502328 121 ntBASIC5.24□□□□□ -1.57
USP11P51784 RNU6-470P-201ENST00000515954 104 ntBASIC5.24□□□□□ -1.57
USP11P51784 RNU6-120P-201ENST00000516077 103 ntBASIC5.24□□□□□ -1.57
USP11P51784 RNU6-189P-201ENST00000516120 101 ntBASIC5.24□□□□□ -1.57
USP11P51784 RNU6-1143P-201ENST00000516125 104 ntBASIC5.24□□□□□ -1.57
USP11P51784 RNU4ATAC7P-201ENST00000516280 125 ntBASIC5.24□□□□□ -1.57
USP11P51784 AC008641.1-201ENST00000523781 248 ntTSL 3 BASIC5.24□□□□□ -1.57
USP11P51784 AC023442.1-201ENST00000531247 422 ntBASIC5.24□□□□□ -1.57
USP11P51784 AC022882.1-201ENST00000532142 501 ntBASIC5.24□□□□□ -1.57
USP11P51784 DYNLL1P4-201ENST00000549314 266 ntBASIC5.24□□□□□ -1.57
USP11P51784 LINC00644-201ENST00000555156 295 ntTSL 2 BASIC5.24□□□□□ -1.57
USP11P51784 AC023510.1-201ENST00000555862 490 ntTSL 2 BASIC5.24□□□□□ -1.57
USP11P51784 AC020661.3-201ENST00000558101 414 ntTSL 3 BASIC5.24□□□□□ -1.57
USP11P51784 AC015912.2-201ENST00000571053 181 ntBASIC5.24□□□□□ -1.57
USP11P51784 MIR4504-201ENST00000577413 92 ntBASIC5.24□□□□□ -1.57
USP11P51784 AC011518.1-202ENST00000592668 407 ntTSL 5 BASIC5.24□□□□□ -1.57
USP11P51784 AC234771.5-201ENST00000600161 514 ntBASIC5.24□□□□□ -1.57
USP11P51784 AC100812.1-201ENST00000607622 580 ntBASIC5.24□□□□□ -1.57
USP11P51784 MIR6128-201ENST00000615528 109 ntBASIC5.24□□□□□ -1.57
USP11P51784 DLEU2_5.1-201ENST00000615567 84 ntBASIC5.24□□□□□ -1.57
USP11P51784 LINC00901.1-201ENST00000617252 152 ntBASIC5.24□□□□□ -1.57
USP11P51784 APAF1-209ENST00000550527 6581 ntAPPRIS ALT1 TSL 1 (best) BASIC5.24□□□□□ -1.57
USP11P51784 ING3-201ENST00000315870 3777 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
USP11P51784 FLJ46284-201ENST00000504861 3421 ntTSL 2 BASIC5.24□□□□□ -1.57
USP11P51784 ANK2-202ENST00000357077 14196 ntAPPRIS P3 TSL 1 (best) BASIC5.24□□□□□ -1.57
USP11P51784 ELOVL7-203ENST00000505959 4165 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
USP11P51784 ANK3-202ENST00000355288 3811 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
USP11P51784 LZTFL1-216ENST00000539217 4113 ntTSL 2 BASIC5.24□□□□□ -1.57
USP11P51784 AC092821.1-204ENST00000518709 3552 ntTSL 5 BASIC5.24□□□□□ -1.57
USP11P51784 RASGEF1B-207ENST00000509081 3016 ntAPPRIS ALT1 TSL 5 BASIC5.23□□□□□ -1.57
USP11P51784 FOXP2-220ENST00000634411 4065 ntTSL 5 BASIC5.23□□□□□ -1.57
USP11P51784 ARHGEF12-202ENST00000397843 9660 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
USP11P51784 PCDH11X-207ENST00000406881 4156 ntAPPRIS ALT2 TSL 1 (best) BASIC5.23□□□□□ -1.57
USP11P51784 AC005592.1-201ENST00000566527 1640 ntBASIC5.23□□□□□ -1.57
USP11P51784 PTRH2-203ENST00000470557 4114 ntAPPRIS P3 BASIC5.23□□□□□ -1.57
USP11P51784 ABCA13-204ENST00000435803 17184 ntAPPRIS P2 TSL 1 (best) BASIC5.23□□□□□ -1.57
USP11P51784 HNMT-202ENST00000280097 3295 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
USP11P51784 C9orf72-203ENST00000380003 3200 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
USP11P51784 RNU5E-6P-201ENST00000365574 115 ntBASIC5.23□□□□□ -1.57
USP11P51784 Y_RNA.396-201ENST00000383949 103 ntBASIC5.23□□□□□ -1.57
USP11P51784 Y_RNA.447-201ENST00000384184 113 ntBASIC5.23□□□□□ -1.57
USP11P51784 AL136372.1-201ENST00000403060 228 ntBASIC5.23□□□□□ -1.57
USP11P51784 NDUFS5P1-201ENST00000405668 289 ntBASIC5.23□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 96.5 ms