Protein–RNA interactions for Protein: P51587

BRCA2, Breast cancer type 2 susceptibility protein, humanhuman

Predictions only

Length 3,418 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2P51587 AL109653.1-201ENST00000603091 248 ntBASIC1.41□□□□□ -2.18
BRCA2P51587 CERS6-AS1-209ENST00000609766 642 ntTSL 5 BASIC1.41□□□□□ -2.18
BRCA2P51587 RNU1-148P-201ENST00000384472 162 ntBASIC1.41□□□□□ -2.18
BRCA2P51587 AC011405.1-201ENST00000514207 248 ntTSL 3 BASIC1.41□□□□□ -2.18
BRCA2P51587 NPM1P52-201ENST00000518264 846 ntBASIC1.41□□□□□ -2.18
BRCA2P51587 DNAJC8P1-201ENST00000554535 372 ntBASIC1.41□□□□□ -2.18
BRCA2P51587 AC013553.2-201ENST00000604244 589 ntBASIC1.41□□□□□ -2.18
BRCA2P51587 AC097468.3-201ENST00000607956 456 ntBASIC1.41□□□□□ -2.18
BRCA2P51587 AL445493.3-201ENST00000619568 477 ntBASIC1.41□□□□□ -2.18
BRCA2P51587 AP000676.4-201ENST00000624659 623 ntBASIC1.41□□□□□ -2.18
BRCA2P51587 MTND4P1-201ENST00000457501 1466 ntBASIC1.41□□□□□ -2.18
BRCA2P51587 ZNF679-201ENST00000255746 1297 ntAPPRIS P1 TSL 1 (best) BASIC1.4□□□□□ -2.18
BRCA2P51587 FGF12-AS1-201ENST00000414920 580 ntTSL 4 BASIC1.4□□□□□ -2.18
BRCA2P51587 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC1.4□□□□□ -2.18
BRCA2P51587 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC1.4□□□□□ -2.19
BRCA2P51587 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.4□□□□□ -2.19
BRCA2P51587 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC1.4□□□□□ -2.19
BRCA2P51587 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.4□□□□□ -2.19
BRCA2P51587 RNU6-461P-201ENST00000364195 107 ntBASIC1.4□□□□□ -2.19
BRCA2P51587 CYCSP33-201ENST00000414485 327 ntBASIC1.4□□□□□ -2.19
BRCA2P51587 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC1.4□□□□□ -2.19
BRCA2P51587 HSPE1P11-201ENST00000339579 310 ntBASIC1.4□□□□□ -2.19
BRCA2P51587 MIR1304-201ENST00000408243 91 ntBASIC1.4□□□□□ -2.19
BRCA2P51587 LINC01065-201ENST00000417989 577 ntTSL 3 BASIC1.4□□□□□ -2.19
BRCA2P51587 RAB3GAP1-202ENST00000425393 1139 ntTSL 2 BASIC1.4□□□□□ -2.19
BRCA2P51587 EIF2S2P4-201ENST00000461070 984 ntBASIC1.4□□□□□ -2.19
BRCA2P51587 AC092490.2-202ENST00000544922 462 ntTSL 3 BASIC1.4□□□□□ -2.19
BRCA2P51587 LINC01479-201ENST00000545520 509 ntTSL 2 BASIC1.4□□□□□ -2.19
BRCA2P51587 AL159169.2-201ENST00000610061 1269 ntBASIC1.4□□□□□ -2.19
BRCA2P51587 AL109933.3-201ENST00000619095 188 ntBASIC1.4□□□□□ -2.19
BRCA2P51587 SPAM1-203ENST00000402183 1860 ntAPPRIS P4 TSL 5 BASIC1.39□□□□□ -2.19
BRCA2P51587 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC1.39□□□□□ -2.19
BRCA2P51587 HSFY1-202ENST00000309834 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC1.39□□□□□ -2.19
BRCA2P51587 HSFY2-202ENST00000344884 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC1.39□□□□□ -2.19
BRCA2P51587 RNU6-716P-201ENST00000365621 103 ntBASIC1.39□□□□□ -2.19
BRCA2P51587 TRAJ7-201ENST00000390530 59 ntAPPRIS P1 BASIC1.39□□□□□ -2.19
BRCA2P51587 IPMKP1-201ENST00000425988 855 ntBASIC1.39□□□□□ -2.19
BRCA2P51587 SNRPGP13-201ENST00000442212 177 ntBASIC1.39□□□□□ -2.19
BRCA2P51587 RNA5SP330-201ENST00000517096 96 ntBASIC1.39□□□□□ -2.19
BRCA2P51587 SPINK7-205ENST00000523535 299 ntTSL 2 BASIC1.39□□□□□ -2.19
BRCA2P51587 AP005131.3-201ENST00000590042 665 ntTSL 3 BASIC1.39□□□□□ -2.19
BRCA2P51587 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC1.39□□□□□ -2.19
BRCA2P51587 AC116158.1-201ENST00000560231 2129 ntBASIC1.39□□□□□ -2.19
BRCA2P51587 Y_RNA.60-201ENST00000362831 98 ntBASIC1.39□□□□□ -2.19
BRCA2P51587 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC1.39□□□□□ -2.19
BRCA2P51587 AC104653.2-201ENST00000435407 416 ntTSL 3 BASIC1.39□□□□□ -2.19
BRCA2P51587 AC008080.4-202ENST00000440034 1005 ntTSL 3 BASIC1.39□□□□□ -2.19
BRCA2P51587 AP005435.4-201ENST00000529514 284 ntBASIC1.39□□□□□ -2.19
BRCA2P51587 AC007229.1-201ENST00000590455 412 ntBASIC1.39□□□□□ -2.19
BRCA2P51587 DUXAP9-208ENST00000622815 614 ntBASIC1.39□□□□□ -2.19
BRCA2P51587 AC062039.1-201ENST00000414394 565 ntTSL 2 BASIC1.38□□□□□ -2.19
BRCA2P51587 LINC01614-201ENST00000415479 648 ntTSL 2 BASIC1.38□□□□□ -2.19
BRCA2P51587 AC018630.2-202ENST00000422992 927 ntBASIC1.38□□□□□ -2.19
BRCA2P51587 CBX3P2-202ENST00000583365 535 ntBASIC1.38□□□□□ -2.19
BRCA2P51587 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC1.38□□□□□ -2.19
BRCA2P51587 MIR758-201ENST00000390227 88 ntBASIC1.38□□□□□ -2.19
BRCA2P51587 RNA5SP354-201ENST00000391247 136 ntBASIC1.38□□□□□ -2.19
BRCA2P51587 AL445183.3-201ENST00000414168 502 ntBASIC1.38□□□□□ -2.19
BRCA2P51587 AL139109.1-201ENST00000455491 297 ntBASIC1.38□□□□□ -2.19
BRCA2P51587 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC1.38□□□□□ -2.19
BRCA2P51587 FO624990.1-201ENST00000636373 85 ntBASIC1.38□□□□□ -2.19
BRCA2P51587 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC1.38□□□□□ -2.19
BRCA2P51587 HSPD1P16-201ENST00000402302 394 ntBASIC1.38□□□□□ -2.19
BRCA2P51587 AC010967.2-201ENST00000418451 333 ntTSL 2 BASIC1.38□□□□□ -2.19
BRCA2P51587 AL358176.2-201ENST00000425769 204 ntBASIC1.38□□□□□ -2.19
BRCA2P51587 RPS27P5-201ENST00000444247 244 ntBASIC1.38□□□□□ -2.19
BRCA2P51587 APOA2-210ENST00000491350 263 ntTSL 1 (best) BASIC1.38□□□□□ -2.19
BRCA2P51587 AC093689.1-201ENST00000514737 246 ntTSL 5 BASIC1.38□□□□□ -2.19
BRCA2P51587 MIR3935-201ENST00000583472 104 ntBASIC1.38□□□□□ -2.19
BRCA2P51587 AL139286.1-201ENST00000604465 483 ntBASIC1.38□□□□□ -2.19
BRCA2P51587 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC1.38□□□□□ -2.19
BRCA2P51587 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC1.38□□□□□ -2.19
BRCA2P51587 TLR6-205ENST00000610323 1443 ntTSL 5 BASIC1.38□□□□□ -2.19
BRCA2P51587 SNORA18.2-201ENST00000383865 132 ntBASIC1.37□□□□□ -2.19
BRCA2P51587 RNU6-35P-201ENST00000384530 107 ntBASIC1.37□□□□□ -2.19
BRCA2P51587 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC1.37□□□□□ -2.19
BRCA2P51587 Y_RNA.85-201ENST00000363014 111 ntBASIC1.37□□□□□ -2.19
BRCA2P51587 RNA5SP489-201ENST00000410986 109 ntBASIC1.37□□□□□ -2.19
BRCA2P51587 AC002524.1-201ENST00000411687 547 ntBASIC1.37□□□□□ -2.19
BRCA2P51587 AC107032.1-201ENST00000485945 480 ntBASIC1.37□□□□□ -2.19
BRCA2P51587 AC118942.1-201ENST00000529674 1035 ntBASIC1.37□□□□□ -2.19
BRCA2P51587 AC016229.1-201ENST00000589242 487 ntTSL 5 BASIC1.37□□□□□ -2.19
BRCA2P51587 AL136298.1-202ENST00000556520 518 ntTSL 3 BASIC1.37□□□□□ -2.19
BRCA2P51587 AL513324.1-201ENST00000575236 632 ntTSL 5 BASIC1.37□□□□□ -2.19
BRCA2P51587 KCNRG-201ENST00000312942 1527 ntAPPRIS P1 TSL 1 (best) BASIC1.36□□□□□ -2.19
BRCA2P51587 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC1.36□□□□□ -2.19
BRCA2P51587 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC1.36□□□□□ -2.19
BRCA2P51587 LINC01040-201ENST00000425048 666 ntTSL 2 BASIC1.36□□□□□ -2.19
BRCA2P51587 ELOC-204ENST00000519487 814 ntAPPRIS P1 TSL 2 BASIC1.36□□□□□ -2.19
BRCA2P51587 AC090821.2-201ENST00000523552 176 ntBASIC1.36□□□□□ -2.19
BRCA2P51587 AL020996.3-201ENST00000606617 222 ntBASIC1.36□□□□□ -2.19
BRCA2P51587 AC010487.4-201ENST00000637027 61 ntBASIC1.36□□□□□ -2.19
BRCA2P51587 CNOT2-231ENST00000551483 4753 ntTSL 2 BASIC1.36□□□□□ -2.19
BRCA2P51587 AL662889.1-201ENST00000453572 389 ntTSL 3 BASIC1.36□□□□□ -2.19
BRCA2P51587 CLEC2D-214ENST00000543300 399 ntTSL 1 (best) BASIC1.36□□□□□ -2.19
BRCA2P51587 CLEC2D-216ENST00000545918 288 ntTSL 1 (best) BASIC1.36□□□□□ -2.19
BRCA2P51587 AL590095.2-201ENST00000604136 117 ntBASIC1.36□□□□□ -2.19
BRCA2P51587 AC135776.4-201ENST00000624300 1904 ntBASIC1.36□□□□□ -2.19
BRCA2P51587 AL450326.2-201ENST00000421913 1962 ntBASIC1.36□□□□□ -2.19
BRCA2P51587 HSFY1P1-202ENST00000425038 1381 ntTSL 1 (best) BASIC1.36□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 97.6 ms