Protein–RNA interactions for Protein: P49642

PRIM1, DNA primase small subunit, humanhuman

Known RBP Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRIM1P49642 CCAR1-217ENST00000543719 3521 ntTSL 5 BASIC6.75□□□□□ -1.33
PRIM1P49642 KYAT3-203ENST00000370491 1868 ntAPPRIS ALT1 TSL 2 BASIC6.75□□□□□ -1.33
PRIM1P49642 AC091534.1-201ENST00000548779 1751 ntTSL 2 BASIC6.74□□□□□ -1.33
PRIM1P49642 AC097461.1-201ENST00000568928 2821 ntBASIC6.74□□□□□ -1.33
PRIM1P49642 FCRL5-202ENST00000368189 4424 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
PRIM1P49642 FRAS1-207ENST00000512123 15624 ntAPPRIS P1 TSL 5 BASIC6.74□□□□□ -1.33
PRIM1P49642 WDPCP-203ENST00000409120 5408 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
PRIM1P49642 OR51I1-201ENST00000380211 945 ntAPPRIS P1 BASIC6.74□□□□□ -1.33
PRIM1P49642 AC068483.1-201ENST00000413403 660 ntTSL 3 BASIC6.74□□□□□ -1.33
PRIM1P49642 BX842559.1-201ENST00000419615 532 ntBASIC6.74□□□□□ -1.33
PRIM1P49642 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC6.74□□□□□ -1.33
PRIM1P49642 TRAPPC2P5-201ENST00000426293 308 ntBASIC6.74□□□□□ -1.33
PRIM1P49642 OR4C10P-201ENST00000434991 931 ntBASIC6.74□□□□□ -1.33
PRIM1P49642 AC096644.1-201ENST00000446169 390 ntTSL 3 BASIC6.74□□□□□ -1.33
PRIM1P49642 AC068489.1-201ENST00000453706 261 ntTSL 5 BASIC6.74□□□□□ -1.33
PRIM1P49642 RPL21P41-201ENST00000459863 264 ntBASIC6.74□□□□□ -1.33
PRIM1P49642 AC093725.2-201ENST00000507808 356 ntTSL 2 BASIC6.74□□□□□ -1.33
PRIM1P49642 SCARNA20.4-201ENST00000516969 131 ntBASIC6.74□□□□□ -1.33
PRIM1P49642 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC6.74□□□□□ -1.33
PRIM1P49642 AC087369.1-201ENST00000520775 996 ntBASIC6.74□□□□□ -1.33
PRIM1P49642 AC018442.3-201ENST00000523025 183 ntBASIC6.74□□□□□ -1.33
PRIM1P49642 MAFTRR-204ENST00000568389 506 ntTSL 4 BASIC6.74□□□□□ -1.33
PRIM1P49642 ERVK-28-203ENST00000600419 457 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
PRIM1P49642 AC105254.2-201ENST00000603636 436 ntBASIC6.74□□□□□ -1.33
PRIM1P49642 MZT1P2-201ENST00000604387 248 ntBASIC6.74□□□□□ -1.33
PRIM1P49642 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
PRIM1P49642 AC044839.1-205ENST00000614989 542 ntTSL 5 BASIC6.74□□□□□ -1.33
PRIM1P49642 SMIM2-AS1-204ENST00000619472 746 ntTSL 3 BASIC6.74□□□□□ -1.33
PRIM1P49642 CCDC121-201ENST00000324364 2342 ntAPPRIS P3 TSL 1 (best) BASIC6.74□□□□□ -1.33
PRIM1P49642 AC104793.1-201ENST00000508189 2840 ntTSL 2 BASIC6.74□□□□□ -1.33
PRIM1P49642 ELOVL6-202ENST00000394607 6454 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
PRIM1P49642 AP001284.1-201ENST00000528393 2118 ntBASIC6.74□□□□□ -1.33
PRIM1P49642 RFX4-201ENST00000229387 3378 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
PRIM1P49642 MBNL2-204ENST00000397601 4487 ntTSL 5 BASIC6.74□□□□□ -1.33
PRIM1P49642 ZNF299P-201ENST00000406845 1804 ntBASIC6.73□□□□□ -1.33
PRIM1P49642 ADGRG2-203ENST00000356606 4630 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
PRIM1P49642 LCLAT1-203ENST00000379509 4888 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
PRIM1P49642 SDAD1P1-202ENST00000524156 2051 ntBASIC6.73□□□□□ -1.33
PRIM1P49642 KSR2-201ENST00000339824 17726 ntAPPRIS P1 TSL 5 BASIC6.73□□□□□ -1.33
PRIM1P49642 ADGRL3-218ENST00000514996 4731 ntAPPRIS ALT2 TSL 5 BASIC6.73□□□□□ -1.33
PRIM1P49642 HMGN5-201ENST00000358130 2126 ntAPPRIS P2 TSL 2 BASIC6.73□□□□□ -1.33
PRIM1P49642 AL033384.1-202ENST00000431554 3104 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
PRIM1P49642 AC239868.2-201ENST00000564237 4527 ntBASIC6.73□□□□□ -1.33
PRIM1P49642 CDKL3-209ENST00000523054 1775 ntTSL 2 BASIC6.73□□□□□ -1.33
PRIM1P49642 Y_RNA.27-201ENST00000362540 103 ntBASIC6.73□□□□□ -1.33
PRIM1P49642 DEFB136-201ENST00000382209 237 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
PRIM1P49642 SNORD56.6-201ENST00000384569 71 ntBASIC6.73□□□□□ -1.33
PRIM1P49642 RNU2-21P-201ENST00000410368 188 ntBASIC6.73□□□□□ -1.33
PRIM1P49642 RNU6-121P-201ENST00000410525 99 ntBASIC6.73□□□□□ -1.33
PRIM1P49642 TTTY8-202ENST00000426035 518 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
PRIM1P49642 CYCSP43-201ENST00000438233 310 ntBASIC6.73□□□□□ -1.33
PRIM1P49642 TTTY8B-202ENST00000455570 518 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
PRIM1P49642 MRPS33P2-201ENST00000507850 322 ntBASIC6.73□□□□□ -1.33
PRIM1P49642 GLUD1P3-202ENST00000508551 200 ntBASIC6.73□□□□□ -1.33
PRIM1P49642 snoU109.6-201ENST00000516831 118 ntBASIC6.73□□□□□ -1.33
PRIM1P49642 CBX3P4-201ENST00000538909 354 ntBASIC6.73□□□□□ -1.33
PRIM1P49642 AC067852.3-201ENST00000589177 561 ntBASIC6.73□□□□□ -1.33
PRIM1P49642 AC010620.2-201ENST00000600135 313 ntBASIC6.73□□□□□ -1.33
PRIM1P49642 AC073410.2-201ENST00000603240 332 ntBASIC6.73□□□□□ -1.33
PRIM1P49642 RNF138P2-201ENST00000603490 592 ntBASIC6.73□□□□□ -1.33
PRIM1P49642 AC010900.2-201ENST00000604508 210 ntBASIC6.73□□□□□ -1.33
PRIM1P49642 AL162431.4-201ENST00000604674 411 ntBASIC6.73□□□□□ -1.33
PRIM1P49642 VWC2L-201ENST00000312504 4610 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
PRIM1P49642 Z75746.1-201ENST00000440243 2080 ntBASIC6.73□□□□□ -1.33
PRIM1P49642 AC022893.1-201ENST00000517664 3549 ntTSL 2 BASIC6.73□□□□□ -1.33
PRIM1P49642 OR6C4-203ENST00000641851 4989 ntAPPRIS P1 BASIC6.73□□□□□ -1.33
PRIM1P49642 OR5AS1-202ENST00000641320 7860 ntAPPRIS P1 BASIC6.73□□□□□ -1.33
PRIM1P49642 LINC02355-201ENST00000503100 2520 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
PRIM1P49642 PDS5B-201ENST00000315596 7497 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
PRIM1P49642 PLS1-211ENST00000497002 2258 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
PRIM1P49642 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC6.73□□□□□ -1.33
PRIM1P49642 ZNF780A-205ENST00000594395 2044 ntAPPRIS ALT2 TSL 2 BASIC6.72□□□□□ -1.33
PRIM1P49642 NTRK3-205ENST00000394480 19984 ntAPPRIS P3 TSL 5 BASIC6.72□□□□□ -1.33
PRIM1P49642 ARHGAP5-210ENST00000556611 4824 ntAPPRIS ALT1 TSL 5 BASIC6.72□□□□□ -1.33
PRIM1P49642 ANXA1-202ENST00000376911 2209 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
PRIM1P49642 RFC1-201ENST00000349703 4859 ntAPPRIS P3 TSL 1 (best) BASIC6.72□□□□□ -1.33
PRIM1P49642 RFC1-202ENST00000381897 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC6.72□□□□□ -1.33
PRIM1P49642 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
PRIM1P49642 STK31-205ENST00000433467 3085 ntTSL 2 BASIC6.72□□□□□ -1.33
PRIM1P49642 PCGF5-201ENST00000336126 7018 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
PRIM1P49642 RNA5SP191-201ENST00000362585 102 ntBASIC6.72□□□□□ -1.33
PRIM1P49642 AC068538.1-201ENST00000376856 336 ntBASIC6.72□□□□□ -1.33
PRIM1P49642 VTI1BP4-201ENST00000427516 527 ntBASIC6.72□□□□□ -1.33
PRIM1P49642 AC092423.1-201ENST00000430165 186 ntBASIC6.72□□□□□ -1.33
PRIM1P49642 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC6.72□□□□□ -1.33
PRIM1P49642 AC005798.1-201ENST00000513715 387 ntBASIC6.72□□□□□ -1.33
PRIM1P49642 RNA5SP43-201ENST00000516559 110 ntBASIC6.72□□□□□ -1.33
PRIM1P49642 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC6.72□□□□□ -1.33
PRIM1P49642 AP002392.1-201ENST00000537692 208 ntBASIC6.72□□□□□ -1.33
PRIM1P49642 AC138360.1-201ENST00000552332 386 ntTSL 3 BASIC6.72□□□□□ -1.33
PRIM1P49642 AC027130.1-201ENST00000564490 686 ntTSL 2 BASIC6.72□□□□□ -1.33
PRIM1P49642 AC091042.1-201ENST00000579213 173 ntBASIC6.72□□□□□ -1.33
PRIM1P49642 MIR3667-201ENST00000581025 74 ntBASIC6.72□□□□□ -1.33
PRIM1P49642 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC6.72□□□□□ -1.33
PRIM1P49642 AC008814.1-201ENST00000603797 406 ntBASIC6.72□□□□□ -1.33
PRIM1P49642 AC244107.2-201ENST00000611773 76 ntBASIC6.72□□□□□ -1.33
PRIM1P49642 MIR1244-1-201ENST00000612829 85 ntBASIC6.72□□□□□ -1.33
PRIM1P49642 MIR1244-3-201ENST00000635744 85 ntBASIC6.72□□□□□ -1.33
PRIM1P49642 MIR1244-2-201ENST00000636449 85 ntBASIC6.72□□□□□ -1.33
PRIM1P49642 MIR1244-4-202ENST00000636813 85 ntBASIC6.72□□□□□ -1.33
Retrieved 100 of 98,524 protein–RNA pairs in 101.3 ms