Protein–RNA interactions for Protein: P40939

HADHA, Trifunctional enzyme subunit alpha, mitochondrial, humanhuman

Predictions only

Length 763 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HADHAP40939 AC055855.1-201ENST00000489563 579 ntBASIC3.57□□□□□ -1.84
HADHAP40939 AC112204.1-201ENST00000502591 103 ntBASIC3.57□□□□□ -1.84
HADHAP40939 AC118465.1-201ENST00000513820 1271 ntBASIC3.57□□□□□ -1.84
HADHAP40939 GMPSP1-201ENST00000514075 579 ntBASIC3.57□□□□□ -1.84
HADHAP40939 RNU6-840P-201ENST00000517275 65 ntBASIC3.57□□□□□ -1.84
HADHAP40939 AC084116.2-201ENST00000520171 415 ntTSL 4 BASIC3.57□□□□□ -1.84
HADHAP40939 AC026333.2-201ENST00000542164 106 ntBASIC3.57□□□□□ -1.84
HADHAP40939 AC025254.1-201ENST00000550035 247 ntTSL 5 BASIC3.57□□□□□ -1.84
HADHAP40939 AC090503.2-201ENST00000551135 981 ntTSL 3 BASIC3.57□□□□□ -1.84
HADHAP40939 OR4H12P-201ENST00000556269 907 ntBASIC3.57□□□□□ -1.84
HADHAP40939 LINC02290-203ENST00000556662 577 ntTSL 4 BASIC3.57□□□□□ -1.84
HADHAP40939 AL133153.1-201ENST00000557756 303 ntBASIC3.57□□□□□ -1.84
HADHAP40939 NR2F2-AS1-211ENST00000561402 589 ntTSL 3 BASIC3.57□□□□□ -1.84
HADHAP40939 ZNF415P1-201ENST00000582279 1166 ntBASIC3.57□□□□□ -1.84
HADHAP40939 AC083760.1-201ENST00000589621 670 ntBASIC3.57□□□□□ -1.84
HADHAP40939 AC010591.1-201ENST00000603941 649 ntBASIC3.57□□□□□ -1.84
HADHAP40939 AC007038.2-201ENST00000608095 740 ntBASIC3.57□□□□□ -1.84
HADHAP40939 AC103710.1-201ENST00000610003 901 ntBASIC3.57□□□□□ -1.84
HADHAP40939 MIR6076-201ENST00000617521 113 ntBASIC3.57□□□□□ -1.84
HADHAP40939 AC012150.2-201ENST00000621300 544 ntBASIC3.57□□□□□ -1.84
HADHAP40939 AC009093.8-201ENST00000641769 292 ntBASIC3.57□□□□□ -1.84
HADHAP40939 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC3.56□□□□□ -1.84
HADHAP40939 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
HADHAP40939 PHTF2-201ENST00000248550 4778 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
HADHAP40939 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
HADHAP40939 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.56□□□□□ -1.84
HADHAP40939 METTL18-201ENST00000303469 1426 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
HADHAP40939 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
HADHAP40939 ABCA5-208ENST00000588877 6525 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
HADHAP40939 IL2-201ENST00000226730 1029 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
HADHAP40939 CFHR4-201ENST00000251424 1292 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
HADHAP40939 SNORD9-201ENST00000362566 104 ntBASIC3.56□□□□□ -1.84
HADHAP40939 RNU5F-6P-201ENST00000362979 116 ntBASIC3.56□□□□□ -1.84
HADHAP40939 C1orf105-203ENST00000367727 985 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
HADHAP40939 CRISP3-203ENST00000371159 872 ntAPPRIS ALT2 TSL 5 BASIC3.56□□□□□ -1.84
HADHAP40939 MIR514A1-201ENST00000385133 98 ntBASIC3.56□□□□□ -1.84
HADHAP40939 AC009505.1-201ENST00000413151 424 ntTSL 2 BASIC3.56□□□□□ -1.84
HADHAP40939 RPL17P12-201ENST00000413391 526 ntBASIC3.56□□□□□ -1.84
HADHAP40939 AC004870.4-201ENST00000424359 360 ntTSL 2 BASIC3.56□□□□□ -1.84
HADHAP40939 USP9YP36-201ENST00000424581 829 ntBASIC3.56□□□□□ -1.84
HADHAP40939 YME1L1P1-201ENST00000429435 297 ntBASIC3.56□□□□□ -1.84
HADHAP40939 AL731563.2-201ENST00000431293 291 ntTSL 5 BASIC3.56□□□□□ -1.84
HADHAP40939 AL512658.1-202ENST00000433486 400 ntTSL 3 BASIC3.56□□□□□ -1.84
HADHAP40939 NDUFB4P6-201ENST00000436819 366 ntBASIC3.56□□□□□ -1.84
HADHAP40939 MTCO3P45-201ENST00000443036 613 ntBASIC3.56□□□□□ -1.84
HADHAP40939 AF127577.5-201ENST00000449746 446 ntTSL 3 BASIC3.56□□□□□ -1.84
HADHAP40939 MTCO1P42-201ENST00000457379 726 ntBASIC3.56□□□□□ -1.84
HADHAP40939 TIPARP-AS1-201ENST00000463449 735 ntTSL 3 BASIC3.56□□□□□ -1.84
HADHAP40939 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC3.56□□□□□ -1.84
HADHAP40939 DSTNP2-201ENST00000504533 515 ntBASIC3.56□□□□□ -1.84
HADHAP40939 AC016553.1-201ENST00000513283 249 ntTSL 3 BASIC3.56□□□□□ -1.84
HADHAP40939 PCAT4-202ENST00000514836 373 ntTSL 3 BASIC3.56□□□□□ -1.84
HADHAP40939 SNORA70.19-201ENST00000516717 90 ntBASIC3.56□□□□□ -1.84
HADHAP40939 MTND4LP18-201ENST00000526864 291 ntBASIC3.56□□□□□ -1.84
HADHAP40939 AC068993.2-201ENST00000546563 395 ntTSL 5 BASIC3.56□□□□□ -1.84
HADHAP40939 AL845331.3-202ENST00000562856 261 ntBASIC3.56□□□□□ -1.84
HADHAP40939 AL359999.1-201ENST00000604513 294 ntBASIC3.56□□□□□ -1.84
HADHAP40939 AC004777.1-201ENST00000624317 287 ntBASIC3.56□□□□□ -1.84
HADHAP40939 AC119674.1-207ENST00000641355 633 ntBASIC3.56□□□□□ -1.84
HADHAP40939 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC3.56□□□□□ -1.84
HADHAP40939 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC3.56□□□□□ -1.84
HADHAP40939 DAZ4-201ENST00000382296 2048 ntAPPRIS P5 TSL 5 BASIC3.56□□□□□ -1.84
HADHAP40939 RHOT1-204ENST00000394692 2960 ntTSL 2 BASIC3.56□□□□□ -1.84
HADHAP40939 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
HADHAP40939 ATP8A2P3-201ENST00000426792 1536 ntBASIC3.55□□□□□ -1.84
HADHAP40939 MBNL1-206ENST00000357472 5256 ntTSL 5 BASIC3.55□□□□□ -1.84
HADHAP40939 MBNL1-223ENST00000498502 5258 ntTSL 5 BASIC3.55□□□□□ -1.84
HADHAP40939 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC3.55□□□□□ -1.84
HADHAP40939 TIMM9-202ENST00000395159 1336 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
HADHAP40939 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC3.55□□□□□ -1.84
HADHAP40939 OR6C70-201ENST00000327335 939 ntAPPRIS P1 BASIC3.55□□□□□ -1.84
HADHAP40939 Y_RNA.46-201ENST00000362695 102 ntBASIC3.55□□□□□ -1.84
HADHAP40939 RNU5F-7P-201ENST00000363696 115 ntBASIC3.55□□□□□ -1.84
HADHAP40939 RNU5A-8P-201ENST00000364102 114 ntBASIC3.55□□□□□ -1.84
HADHAP40939 RNU6-278P-201ENST00000390945 109 ntBASIC3.55□□□□□ -1.84
HADHAP40939 LINC02337-201ENST00000401043 374 ntTSL 3 BASIC3.55□□□□□ -1.84
HADHAP40939 RPL7P25-201ENST00000404151 721 ntBASIC3.55□□□□□ -1.84
HADHAP40939 TXNP7-201ENST00000406296 293 ntBASIC3.55□□□□□ -1.84
HADHAP40939 PPP1R1C-203ENST00000409702 1157 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
HADHAP40939 SYF2P2-201ENST00000417620 583 ntBASIC3.55□□□□□ -1.84
HADHAP40939 BX842559.1-201ENST00000419615 532 ntBASIC3.55□□□□□ -1.84
HADHAP40939 AL353777.1-201ENST00000425552 326 ntBASIC3.55□□□□□ -1.84
HADHAP40939 AP000907.1-201ENST00000428428 510 ntBASIC3.55□□□□□ -1.84
HADHAP40939 AC091286.1-201ENST00000431233 461 ntBASIC3.55□□□□□ -1.84
HADHAP40939 LINC01884-201ENST00000433429 440 ntTSL 3 BASIC3.55□□□□□ -1.84
HADHAP40939 PATE1-202ENST00000437148 457 ntAPPRIS ALT2 TSL 1 (best) BASIC3.55□□□□□ -1.84
HADHAP40939 FTH1P1-201ENST00000437933 532 ntBASIC3.55□□□□□ -1.84
HADHAP40939 AL049734.2-201ENST00000441066 616 ntBASIC3.55□□□□□ -1.84
HADHAP40939 GDI2P2-201ENST00000445131 608 ntBASIC3.55□□□□□ -1.84
HADHAP40939 MTUS2-AS2-203ENST00000452602 651 ntTSL 3 BASIC3.55□□□□□ -1.84
HADHAP40939 AL023581.2-201ENST00000454588 552 ntTSL 2 BASIC3.55□□□□□ -1.84
HADHAP40939 RPL21P8-201ENST00000465083 535 ntBASIC3.55□□□□□ -1.84
HADHAP40939 RPL23AP67-201ENST00000465341 474 ntBASIC3.55□□□□□ -1.84
HADHAP40939 RPL32P34-201ENST00000486380 400 ntBASIC3.55□□□□□ -1.84
HADHAP40939 RPL30P5-201ENST00000494923 336 ntBASIC3.55□□□□□ -1.84
HADHAP40939 AC016550.2-202ENST00000511940 581 ntTSL 2 BASIC3.55□□□□□ -1.84
HADHAP40939 SNORA31.1-201ENST00000515993 133 ntBASIC3.55□□□□□ -1.84
HADHAP40939 SNORA31.5-201ENST00000516190 133 ntBASIC3.55□□□□□ -1.84
HADHAP40939 AC100870.1-201ENST00000522035 505 ntBASIC3.55□□□□□ -1.84
HADHAP40939 MAL2-206ENST00000522187 547 ntTSL 4 BASIC3.55□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 90.4 ms