Protein–RNA interactions for Protein: P39059

COL15A1, Collagen alpha-1(XV) chain, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL15A1P39059 AC104010.1-201ENST00000616889 150 ntBASIC4.27□□□□□ -1.73
COL15A1P39059 C17orf112-201ENST00000623702 835 ntTSL 2 BASIC4.27□□□□□ -1.73
COL15A1P39059 UBE2E2-207ENST00000628311 267 ntTSL 5 BASIC4.27□□□□□ -1.73
COL15A1P39059 ABCA12-202ENST00000389661 7005 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
COL15A1P39059 CCT4P2-201ENST00000233836 1548 ntBASIC4.26□□□□□ -1.73
COL15A1P39059 RGS13-204ENST00000543215 1518 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
COL15A1P39059 ZNF807-201ENST00000328088 1707 ntBASIC4.26□□□□□ -1.73
COL15A1P39059 G2E3-201ENST00000206595 5804 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
COL15A1P39059 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
COL15A1P39059 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC4.26□□□□□ -1.73
COL15A1P39059 AC118273.1-201ENST00000525324 3006 ntBASIC4.26□□□□□ -1.73
COL15A1P39059 OR5B3-201ENST00000309403 945 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
COL15A1P39059 Y_RNA.6-201ENST00000362350 114 ntBASIC4.26□□□□□ -1.73
COL15A1P39059 C1orf100-202ENST00000366537 483 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
COL15A1P39059 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
COL15A1P39059 FCF1P10-201ENST00000407590 479 ntBASIC4.26□□□□□ -1.73
COL15A1P39059 RNU4-47P-201ENST00000410876 114 ntBASIC4.26□□□□□ -1.73
COL15A1P39059 RPS3AP3-201ENST00000411933 242 ntBASIC4.26□□□□□ -1.73
COL15A1P39059 AC002456.1-201ENST00000415965 317 ntTSL 5 BASIC4.26□□□□□ -1.73
COL15A1P39059 AC092832.1-201ENST00000422934 400 ntBASIC4.26□□□□□ -1.73
COL15A1P39059 MTCYBP45-201ENST00000435243 565 ntBASIC4.26□□□□□ -1.73
COL15A1P39059 AC007099.2-201ENST00000444852 336 ntTSL 5 BASIC4.26□□□□□ -1.73
COL15A1P39059 LINC01069-201ENST00000452933 546 ntTSL 5 BASIC4.26□□□□□ -1.73
COL15A1P39059 FGF7P3-201ENST00000454645 303 ntBASIC4.26□□□□□ -1.73
COL15A1P39059 AC097462.2-201ENST00000504623 481 ntBASIC4.26□□□□□ -1.73
COL15A1P39059 AP002075.1-201ENST00000505091 603 ntTSL 3 BASIC4.26□□□□□ -1.73
COL15A1P39059 PCBP2P3-201ENST00000509726 843 ntBASIC4.26□□□□□ -1.73
COL15A1P39059 MTCO3P44-201ENST00000510977 541 ntBASIC4.26□□□□□ -1.73
COL15A1P39059 RNU6-714P-201ENST00000516963 103 ntBASIC4.26□□□□□ -1.73
COL15A1P39059 IGKV2D-36-201ENST00000518643 226 ntBASIC4.26□□□□□ -1.73
COL15A1P39059 LINC02398-201ENST00000536666 431 ntTSL 3 BASIC4.26□□□□□ -1.73
COL15A1P39059 AC009396.3-201ENST00000555680 354 ntTSL 5 BASIC4.26□□□□□ -1.73
COL15A1P39059 AC009063.1-201ENST00000563342 702 ntBASIC4.26□□□□□ -1.73
COL15A1P39059 AP005380.1-201ENST00000584896 547 ntTSL 4 BASIC4.26□□□□□ -1.73
COL15A1P39059 AC009977.1-201ENST00000586015 570 ntBASIC4.26□□□□□ -1.73
COL15A1P39059 AC107304.1-201ENST00000604229 296 ntBASIC4.26□□□□□ -1.73
COL15A1P39059 AC103710.1-201ENST00000610003 901 ntBASIC4.26□□□□□ -1.73
COL15A1P39059 AC109347.2-201ENST00000610220 349 ntBASIC4.26□□□□□ -1.73
COL15A1P39059 TMBIM4-213ENST00000613669 851 ntTSL 5 BASIC4.26□□□□□ -1.73
COL15A1P39059 AC092447.10-201ENST00000620607 1652 ntBASIC4.26□□□□□ -1.73
COL15A1P39059 THOC1-220ENST00000621904 1083 ntTSL 5 BASIC4.26□□□□□ -1.73
COL15A1P39059 CAPZA2-214ENST00000628758 525 ntTSL 5 BASIC4.26□□□□□ -1.73
COL15A1P39059 OR5B3-202ENST00000641865 1046 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
COL15A1P39059 RAD17-202ENST00000305138 3164 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
COL15A1P39059 CD84-206ENST00000368054 8181 ntAPPRIS P3 TSL 1 (best) BASIC4.25□□□□□ -1.73
COL15A1P39059 LRRC39-204ENST00000620882 1951 ntTSL 5 BASIC4.25□□□□□ -1.73
COL15A1P39059 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC4.25□□□□□ -1.73
COL15A1P39059 AKAP6-201ENST00000280979 15006 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
COL15A1P39059 KCNE2-201ENST00000290310 1051 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
COL15A1P39059 Y_RNA.41-201ENST00000362646 102 ntBASIC4.25□□□□□ -1.73
COL15A1P39059 RNU6-97P-201ENST00000363387 104 ntBASIC4.25□□□□□ -1.73
COL15A1P39059 RN7SKP44-201ENST00000363602 316 ntBASIC4.25□□□□□ -1.73
COL15A1P39059 RNA5SP235-201ENST00000365411 114 ntBASIC4.25□□□□□ -1.73
COL15A1P39059 RNU6-259P-201ENST00000383999 107 ntBASIC4.25□□□□□ -1.73
COL15A1P39059 Y_RNA.516-201ENST00000384541 124 ntBASIC4.25□□□□□ -1.73
COL15A1P39059 HIGD1C-201ENST00000398455 371 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
COL15A1P39059 RNA5SP239-201ENST00000410218 129 ntBASIC4.25□□□□□ -1.73
COL15A1P39059 FCF1P9-201ENST00000412546 282 ntBASIC4.25□□□□□ -1.73
COL15A1P39059 Z99755.1-201ENST00000414048 380 ntBASIC4.25□□□□□ -1.73
COL15A1P39059 SPA17P1-201ENST00000416656 452 ntBASIC4.25□□□□□ -1.73
COL15A1P39059 TTTY3-201ENST00000417334 344 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
COL15A1P39059 DIAPH3-AS1-201ENST00000422052 428 ntTSL 3 BASIC4.25□□□□□ -1.73
COL15A1P39059 AC007271.1-201ENST00000428188 382 ntTSL 3 BASIC4.25□□□□□ -1.73
COL15A1P39059 AL031667.1-201ENST00000440222 725 ntBASIC4.25□□□□□ -1.73
COL15A1P39059 SNORD108-201ENST00000459332 71 ntBASIC4.25□□□□□ -1.73
COL15A1P39059 RPL9P33-201ENST00000484311 566 ntBASIC4.25□□□□□ -1.73
COL15A1P39059 AC020703.1-201ENST00000505051 521 ntTSL 3 BASIC4.25□□□□□ -1.73
COL15A1P39059 AC116616.1-201ENST00000508815 366 ntTSL 3 BASIC4.25□□□□□ -1.73
COL15A1P39059 AC108727.1-201ENST00000513802 393 ntTSL 2 BASIC4.25□□□□□ -1.73
COL15A1P39059 HIGD1AP3-201ENST00000515857 278 ntBASIC4.25□□□□□ -1.73
COL15A1P39059 SNORA18.6-201ENST00000516792 115 ntBASIC4.25□□□□□ -1.73
COL15A1P39059 RNU6-1003P-201ENST00000517099 105 ntBASIC4.25□□□□□ -1.73
COL15A1P39059 MTND1P5-201ENST00000517906 940 ntBASIC4.25□□□□□ -1.73
COL15A1P39059 TRIQK-207ENST00000519069 598 ntTSL 4 BASIC4.25□□□□□ -1.73
COL15A1P39059 AC022240.1-201ENST00000532065 684 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
COL15A1P39059 UNC13C-202ENST00000539562 938 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
COL15A1P39059 APAF1-207ENST00000547743 651 ntTSL 3 BASIC4.25□□□□□ -1.73
COL15A1P39059 RPL21P5-201ENST00000554662 472 ntBASIC4.25□□□□□ -1.73
COL15A1P39059 AL355812.1-201ENST00000603215 216 ntBASIC4.25□□□□□ -1.73
COL15A1P39059 AC107294.1-201ENST00000609524 467 ntBASIC4.25□□□□□ -1.73
COL15A1P39059 AC138749.5-201ENST00000611461 208 ntBASIC4.25□□□□□ -1.73
COL15A1P39059 AC091834.1-201ENST00000614543 472 ntBASIC4.25□□□□□ -1.73
COL15A1P39059 AC116165.2-201ENST00000616705 206 ntBASIC4.25□□□□□ -1.73
COL15A1P39059 RMST_9.1-201ENST00000619945 193 ntBASIC4.25□□□□□ -1.73
COL15A1P39059 TTTY3B-201ENST00000631331 344 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
COL15A1P39059 AC068137.3-201ENST00000639191 341 ntBASIC4.25□□□□□ -1.73
COL15A1P39059 AC073869.6-201ENST00000640656 341 ntBASIC4.25□□□□□ -1.73
COL15A1P39059 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC4.24□□□□□ -1.73
COL15A1P39059 CPNE8-202ENST00000360449 1757 ntAPPRIS ALT2 TSL 2 BASIC4.24□□□□□ -1.73
COL15A1P39059 OR9H1P-201ENST00000446393 4888 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
COL15A1P39059 CDH9-201ENST00000231021 3079 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
COL15A1P39059 PABPC1P7-201ENST00000413177 1513 ntBASIC4.24□□□□□ -1.73
COL15A1P39059 LINC00158-201ENST00000332587 1476 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
COL15A1P39059 SCFD1-207ENST00000544052 2058 ntTSL 2 BASIC4.24□□□□□ -1.73
COL15A1P39059 AC092125.1-201ENST00000562568 1995 ntBASIC4.24□□□□□ -1.73
COL15A1P39059 RNY4P34-201ENST00000364779 95 ntBASIC4.24□□□□□ -1.73
COL15A1P39059 RNU6-1207P-201ENST00000384343 107 ntBASIC4.24□□□□□ -1.73
COL15A1P39059 RNU6-248P-201ENST00000410720 107 ntBASIC4.24□□□□□ -1.73
COL15A1P39059 UBE2V1P10-201ENST00000414685 269 ntBASIC4.24□□□□□ -1.73
COL15A1P39059 AL691426.1-201ENST00000416507 509 ntTSL 2 BASIC4.24□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 94.9 ms