Protein–RNA interactions for Protein: P36941

LTBR, Tumor necrosis factor receptor superfamily member 3, humanhuman

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTBRP36941 MTUS1-228ENST00000544260 3650 ntTSL 2 BASIC4.6□□□□□ -1.67
LTBRP36941 MYBPC1-208ENST00000547405 3834 ntAPPRIS ALT2 TSL 1 (best) BASIC4.6□□□□□ -1.67
LTBRP36941 ADAM24P-201ENST00000398655 2101 ntBASIC4.6□□□□□ -1.67
LTBRP36941 LINC01206-204ENST00000482787 9580 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
LTBRP36941 CD200R1-204ENST00000471858 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC4.6□□□□□ -1.67
LTBRP36941 OR10A7-201ENST00000326258 951 ntAPPRIS P1 BASIC4.6□□□□□ -1.67
LTBRP36941 MIR548K-201ENST00000408406 116 ntBASIC4.6□□□□□ -1.67
LTBRP36941 RNU2-43P-201ENST00000410306 190 ntBASIC4.6□□□□□ -1.67
LTBRP36941 YME1L1P1-201ENST00000429435 297 ntBASIC4.6□□□□□ -1.67
LTBRP36941 AC004938.1-201ENST00000438468 308 ntBASIC4.6□□□□□ -1.67
LTBRP36941 TBX18-AS1-202ENST00000441863 382 ntTSL 2 BASIC4.6□□□□□ -1.67
LTBRP36941 AL121871.1-201ENST00000443413 436 ntBASIC4.6□□□□□ -1.67
LTBRP36941 AC112715.1-201ENST00000445534 350 ntTSL 3 BASIC4.6□□□□□ -1.67
LTBRP36941 AL500522.2-201ENST00000448562 343 ntBASIC4.6□□□□□ -1.67
LTBRP36941 RPL21P103-201ENST00000479921 488 ntBASIC4.6□□□□□ -1.67
LTBRP36941 RPL21P93-201ENST00000480465 489 ntBASIC4.6□□□□□ -1.67
LTBRP36941 AC079340.1-201ENST00000504799 552 ntTSL 4 BASIC4.6□□□□□ -1.67
LTBRP36941 LINC02118-202ENST00000510583 419 ntTSL 3 BASIC4.6□□□□□ -1.67
LTBRP36941 AC106744.2-202ENST00000515123 448 ntTSL 3 BASIC4.6□□□□□ -1.67
LTBRP36941 RNU6-123P-201ENST00000516163 102 ntBASIC4.6□□□□□ -1.67
LTBRP36941 RNU6-327P-201ENST00000516270 127 ntBASIC4.6□□□□□ -1.67
LTBRP36941 Y_RNA.718-201ENST00000517110 102 ntBASIC4.6□□□□□ -1.67
LTBRP36941 NDST1-AS1-201ENST00000519040 368 ntTSL 2 BASIC4.6□□□□□ -1.67
LTBRP36941 AP005639.2-201ENST00000527592 928 ntBASIC4.6□□□□□ -1.67
LTBRP36941 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC4.6□□□□□ -1.67
LTBRP36941 AC093515.1-201ENST00000567103 445 ntTSL 5 BASIC4.6□□□□□ -1.67
LTBRP36941 AC106782.4-201ENST00000568264 210 ntBASIC4.6□□□□□ -1.67
LTBRP36941 RPL23AP84-201ENST00000571193 464 ntBASIC4.6□□□□□ -1.67
LTBRP36941 LINC02112-204ENST00000606222 429 ntTSL 5 BASIC4.6□□□□□ -1.67
LTBRP36941 AL627309.6-201ENST00000606857 840 ntBASIC4.6□□□□□ -1.67
LTBRP36941 DLX6-AS1_1.1-201ENST00000621599 180 ntBASIC4.6□□□□□ -1.67
LTBRP36941 CUL2-201ENST00000374746 3903 ntTSL 5 BASIC4.6□□□□□ -1.67
LTBRP36941 SLC35A5-206ENST00000492406 4399 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
LTBRP36941 ADGRG2-201ENST00000340581 3594 ntTSL 2 BASIC4.6□□□□□ -1.67
LTBRP36941 ANAPC1P1-201ENST00000426186 2145 ntBASIC4.6□□□□□ -1.67
LTBRP36941 ZC3H12B-201ENST00000338957 7256 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
LTBRP36941 CDC23-202ENST00000394886 3155 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
LTBRP36941 MYBPC1-201ENST00000361466 3899 ntAPPRIS P4 TSL 1 (best) BASIC4.59□□□□□ -1.67
LTBRP36941 C1orf112-202ENST00000359326 4002 ntAPPRIS P3 TSL 1 (best) BASIC4.59□□□□□ -1.67
LTBRP36941 NCOA1-206ENST00000407230 4745 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
LTBRP36941 OR8A1-203ENST00000641670 5709 ntAPPRIS P1 BASIC4.59□□□□□ -1.67
LTBRP36941 VCAN-201ENST00000265077 12625 ntAPPRIS P3 TSL 1 (best) BASIC4.59□□□□□ -1.67
LTBRP36941 CPSF2-201ENST00000298875 13035 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
LTBRP36941 OR5J2-201ENST00000312298 939 ntAPPRIS P1 BASIC4.59□□□□□ -1.67
LTBRP36941 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
LTBRP36941 SLC38A9-201ENST00000318672 2369 ntAPPRIS P1 TSL 2 BASIC4.59□□□□□ -1.67
LTBRP36941 OR7A5-201ENST00000322301 4216 ntAPPRIS P1 BASIC4.59□□□□□ -1.67
LTBRP36941 PDE7A-201ENST00000379419 2425 ntAPPRIS P3 TSL 2 BASIC4.59□□□□□ -1.67
LTBRP36941 RNU6-356P-201ENST00000384140 107 ntBASIC4.59□□□□□ -1.67
LTBRP36941 SNORA5.1-201ENST00000384275 131 ntBASIC4.59□□□□□ -1.67
LTBRP36941 SNORD116-29-201ENST00000384516 83 ntBASIC4.59□□□□□ -1.67
LTBRP36941 RNU6-1127P-201ENST00000384580 107 ntBASIC4.59□□□□□ -1.67
LTBRP36941 RNA5SP219-201ENST00000390940 113 ntBASIC4.59□□□□□ -1.67
LTBRP36941 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC4.59□□□□□ -1.67
LTBRP36941 EIF4E2P1-201ENST00000393781 255 ntBASIC4.59□□□□□ -1.67
LTBRP36941 SNORA11.2-201ENST00000408318 127 ntBASIC4.59□□□□□ -1.67
LTBRP36941 MIR548P-201ENST00000408336 84 ntBASIC4.59□□□□□ -1.67
LTBRP36941 AC074085.1-201ENST00000413598 418 ntBASIC4.59□□□□□ -1.67
LTBRP36941 AL592435.1-201ENST00000416401 469 ntTSL 3 BASIC4.59□□□□□ -1.67
LTBRP36941 LINC01492-202ENST00000425157 659 ntTSL 5 BASIC4.59□□□□□ -1.67
LTBRP36941 COX6B1P7-201ENST00000430845 235 ntBASIC4.59□□□□□ -1.67
LTBRP36941 LINC01208-202ENST00000434969 827 ntTSL 2 BASIC4.59□□□□□ -1.67
LTBRP36941 AC090774.1-201ENST00000435925 246 ntBASIC4.59□□□□□ -1.67
LTBRP36941 AC105398.1-201ENST00000446073 402 ntTSL 5 BASIC4.59□□□□□ -1.67
LTBRP36941 AL133547.1-201ENST00000448546 220 ntBASIC4.59□□□□□ -1.67
LTBRP36941 RPS15AP27-201ENST00000449183 343 ntBASIC4.59□□□□□ -1.67
LTBRP36941 RPS11P1-201ENST00000451072 473 ntBASIC4.59□□□□□ -1.67
LTBRP36941 SGO1-AS1-203ENST00000455626 2041 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
LTBRP36941 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
LTBRP36941 RPL7P43-201ENST00000478876 753 ntBASIC4.59□□□□□ -1.67
LTBRP36941 AC027575.1-201ENST00000481064 460 ntBASIC4.59□□□□□ -1.67
LTBRP36941 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC4.59□□□□□ -1.67
LTBRP36941 DTHD1-205ENST00000507598 2606 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
LTBRP36941 RPL39P5-202ENST00000512505 151 ntBASIC4.59□□□□□ -1.67
LTBRP36941 RNU6-189P-201ENST00000516120 101 ntBASIC4.59□□□□□ -1.67
LTBRP36941 TRMT10BP1-201ENST00000519377 943 ntBASIC4.59□□□□□ -1.67
LTBRP36941 SDC2-204ENST00000519914 1318 ntTSL 2 BASIC4.59□□□□□ -1.67
LTBRP36941 IFITM8P-201ENST00000522529 394 ntBASIC4.59□□□□□ -1.67
LTBRP36941 AC128707.1-201ENST00000552230 494 ntTSL 3 BASIC4.59□□□□□ -1.67
LTBRP36941 MIR3171-201ENST00000584270 74 ntBASIC4.59□□□□□ -1.67
LTBRP36941 LINC01928-201ENST00000591029 504 ntTSL 3 BASIC4.59□□□□□ -1.67
LTBRP36941 BPIFA4P-203ENST00000603168 689 ntBASIC4.59□□□□□ -1.67
LTBRP36941 LLPHP1-201ENST00000603571 367 ntBASIC4.59□□□□□ -1.67
LTBRP36941 AC104662.1-201ENST00000604448 511 ntBASIC4.59□□□□□ -1.67
LTBRP36941 AL158032.1-201ENST00000605401 106 ntBASIC4.59□□□□□ -1.67
LTBRP36941 AC007998.5-201ENST00000622938 237 ntBASIC4.59□□□□□ -1.67
LTBRP36941 THOC1-221ENST00000631280 2011 ntTSL 5 BASIC4.59□□□□□ -1.67
LTBRP36941 AL589740.1-204ENST00000634677 630 ntTSL 4 BASIC4.59□□□□□ -1.67
LTBRP36941 CCNT1-205ENST00000618666 6915 ntTSL 2 BASIC4.59□□□□□ -1.67
LTBRP36941 SFT2D2-201ENST00000271375 11040 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.68
LTBRP36941 RYR3-209ENST00000634418 15078 ntAPPRIS ALT2 TSL 5 BASIC4.59□□□□□ -1.68
LTBRP36941 RAP1GDS1-205ENST00000408927 3681 ntAPPRIS P3 TSL 2 BASIC4.59□□□□□ -1.68
LTBRP36941 MYBPC1-205ENST00000536007 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC4.59□□□□□ -1.68
LTBRP36941 MYBPC1-206ENST00000541119 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC4.59□□□□□ -1.68
LTBRP36941 OR10Z1-202ENST00000641002 6323 ntAPPRIS P1 BASIC4.59□□□□□ -1.68
LTBRP36941 SCN1A-218ENST00000640036 8131 ntAPPRIS ALT1 TSL 5 BASIC4.59□□□□□ -1.68
LTBRP36941 CUL2-209ENST00000537177 4271 ntTSL 5 BASIC4.58□□□□□ -1.68
LTBRP36941 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC4.58□□□□□ -1.68
LTBRP36941 LRRC39-201ENST00000342895 1881 ntAPPRIS P1 TSL 5 BASIC4.58□□□□□ -1.68
LTBRP36941 LINC01676-202ENST00000435253 1849 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 83.1 ms