Protein–RNA interactions for Protein: P35499

SCN4A, Sodium channel protein type 4 subunit alpha, humanhuman

Predictions only

Length 1,836 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4AP35499 RNU4-62P-201ENST00000410125 130 ntBASIC2.47□□□□□ -2.01
SCN4AP35499 CLYBL-AS1-201ENST00000416009 621 ntTSL 3 BASIC2.47□□□□□ -2.01
SCN4AP35499 TAF13P2-201ENST00000416876 286 ntBASIC2.47□□□□□ -2.01
SCN4AP35499 USP9YP21-201ENST00000420603 432 ntBASIC2.47□□□□□ -2.01
SCN4AP35499 MIR4435-2HG-206ENST00000432818 572 ntTSL 5 BASIC2.47□□□□□ -2.01
SCN4AP35499 AL157387.1-201ENST00000436077 335 ntTSL 2 BASIC2.47□□□□□ -2.01
SCN4AP35499 LINC01359-202ENST00000436350 710 ntTSL 3 BASIC2.47□□□□□ -2.01
SCN4AP35499 RPL23AP76-201ENST00000441860 458 ntBASIC2.47□□□□□ -2.01
SCN4AP35499 AC012181.1-201ENST00000479895 423 ntBASIC2.47□□□□□ -2.01
SCN4AP35499 AC023424.2-201ENST00000493479 777 ntBASIC2.47□□□□□ -2.01
SCN4AP35499 LINC01256-201ENST00000513270 508 ntTSL 2 BASIC2.47□□□□□ -2.01
SCN4AP35499 AC104057.1-201ENST00000515547 497 ntBASIC2.47□□□□□ -2.01
SCN4AP35499 LRRC6P1-201ENST00000532188 885 ntBASIC2.47□□□□□ -2.01
SCN4AP35499 ZNF192P1-203ENST00000565888 810 ntBASIC2.47□□□□□ -2.01
SCN4AP35499 AC018767.1-201ENST00000566236 405 ntTSL 3 BASIC2.47□□□□□ -2.01
SCN4AP35499 AC007001.1-201ENST00000590912 670 ntTSL 5 BASIC2.47□□□□□ -2.01
SCN4AP35499 AC100781.1-202ENST00000597906 463 ntTSL 5 BASIC2.47□□□□□ -2.01
SCN4AP35499 AC008759.3-201ENST00000613300 508 ntBASIC2.47□□□□□ -2.01
SCN4AP35499 AC018926.3-201ENST00000618841 406 ntBASIC2.47□□□□□ -2.01
SCN4AP35499 RNA5SP391-201ENST00000363456 119 ntBASIC2.47□□□□□ -2.01
SCN4AP35499 RNU6-609P-201ENST00000365459 107 ntBASIC2.47□□□□□ -2.01
SCN4AP35499 RNU6-207P-201ENST00000384137 107 ntBASIC2.47□□□□□ -2.01
SCN4AP35499 U8.10-201ENST00000384260 133 ntBASIC2.47□□□□□ -2.01
SCN4AP35499 PRRC2CP1-201ENST00000404428 159 ntBASIC2.47□□□□□ -2.01
SCN4AP35499 RNU2-37P-201ENST00000410695 177 ntBASIC2.47□□□□□ -2.01
SCN4AP35499 AL391863.2-201ENST00000411838 681 ntTSL 2 BASIC2.47□□□□□ -2.01
SCN4AP35499 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC2.47□□□□□ -2.01
SCN4AP35499 AL139230.1-201ENST00000440094 425 ntTSL 3 BASIC2.47□□□□□ -2.01
SCN4AP35499 AC015724.1-201ENST00000478577 156 ntBASIC2.47□□□□□ -2.01
SCN4AP35499 VPS26AP1-201ENST00000483197 979 ntBASIC2.47□□□□□ -2.01
SCN4AP35499 AC093689.1-203ENST00000505967 299 ntTSL 3 BASIC2.47□□□□□ -2.01
SCN4AP35499 AC011363.1-201ENST00000524198 458 ntTSL 5 BASIC2.47□□□□□ -2.01
SCN4AP35499 CTAGE1-202ENST00000525417 1267 ntAPPRIS ALT2 BASIC2.47□□□□□ -2.01
SCN4AP35499 AC239860.2-201ENST00000525886 270 ntBASIC2.47□□□□□ -2.01
SCN4AP35499 AL353699.1-201ENST00000529078 365 ntTSL 3 BASIC2.47□□□□□ -2.01
SCN4AP35499 REXO2-218ENST00000544827 880 ntTSL 3 BASIC2.47□□□□□ -2.01
SCN4AP35499 AC090023.1-201ENST00000545750 443 ntTSL 3 BASIC2.47□□□□□ -2.01
SCN4AP35499 AL359238.1-201ENST00000557770 744 ntTSL 3 BASIC2.47□□□□□ -2.01
SCN4AP35499 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC2.47□□□□□ -2.01
SCN4AP35499 AL160394.1-201ENST00000624765 724 ntBASIC2.47□□□□□ -2.01
SCN4AP35499 AL138960.2-201ENST00000625145 535 ntBASIC2.47□□□□□ -2.01
SCN4AP35499 AC068620.4-201ENST00000636730 1182 ntBASIC2.47□□□□□ -2.01
SCN4AP35499 ZNF849P-201ENST00000594711 1566 ntBASIC2.47□□□□□ -2.01
SCN4AP35499 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC2.47□□□□□ -2.01
SCN4AP35499 AGTR1-205ENST00000461609 1545 ntAPPRIS P1 TSL 3 BASIC2.46□□□□□ -2.01
SCN4AP35499 NETO1-202ENST00000397929 1849 ntTSL 1 (best) BASIC2.46□□□□□ -2.01
SCN4AP35499 OR6C2-202ENST00000641202 2105 ntAPPRIS P1 BASIC2.46□□□□□ -2.01
SCN4AP35499 OR5H15-201ENST00000383696 930 ntBASIC2.46□□□□□ -2.02
SCN4AP35499 RNU6-629P-201ENST00000384061 103 ntBASIC2.46□□□□□ -2.02
SCN4AP35499 SLC9B1P2-201ENST00000398120 1184 ntBASIC2.46□□□□□ -2.02
SCN4AP35499 MTCO2P31-201ENST00000402702 684 ntBASIC2.46□□□□□ -2.02
SCN4AP35499 FGF7P8-201ENST00000402994 292 ntBASIC2.46□□□□□ -2.02
SCN4AP35499 AF274854.1-201ENST00000413236 615 ntBASIC2.46□□□□□ -2.02
SCN4AP35499 AL365184.1-201ENST00000413801 572 ntTSL 3 BASIC2.46□□□□□ -2.02
SCN4AP35499 AP1B1P2-201ENST00000416196 106 ntBASIC2.46□□□□□ -2.02
SCN4AP35499 MTCO2P1-201ENST00000424648 477 ntBASIC2.46□□□□□ -2.02
SCN4AP35499 OR51AB1P-201ENST00000429046 620 ntBASIC2.46□□□□□ -2.02
SCN4AP35499 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC2.46□□□□□ -2.02
SCN4AP35499 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC2.46□□□□□ -2.02
SCN4AP35499 AL118520.1-201ENST00000450770 291 ntBASIC2.46□□□□□ -2.02
SCN4AP35499 FABP5P13-201ENST00000452144 328 ntBASIC2.46□□□□□ -2.02
SCN4AP35499 AC096992.1-201ENST00000459808 709 ntBASIC2.46□□□□□ -2.02
SCN4AP35499 AC005840.1-201ENST00000498412 377 ntBASIC2.46□□□□□ -2.02
SCN4AP35499 AC090071.1-201ENST00000507713 644 ntBASIC2.46□□□□□ -2.02
SCN4AP35499 LINC02267-202ENST00000522173 799 ntTSL 3 BASIC2.46□□□□□ -2.02
SCN4AP35499 AP003385.6-201ENST00000531603 374 ntBASIC2.46□□□□□ -2.02
SCN4AP35499 AP000857.2-201ENST00000532123 419 ntTSL 3 BASIC2.46□□□□□ -2.02
SCN4AP35499 AC027544.2-201ENST00000539313 630 ntTSL 5 BASIC2.46□□□□□ -2.02
SCN4AP35499 AC011611.5-201ENST00000552477 578 ntBASIC2.46□□□□□ -2.02
SCN4AP35499 DNAJC19P9-201ENST00000555084 351 ntBASIC2.46□□□□□ -2.02
SCN4AP35499 AL352955.1-201ENST00000555490 332 ntTSL 3 BASIC2.46□□□□□ -2.02
SCN4AP35499 JKAMP-212ENST00000556985 592 ntTSL 2 BASIC2.46□□□□□ -2.02
SCN4AP35499 MIR4458-201ENST00000578872 75 ntBASIC2.46□□□□□ -2.02
SCN4AP35499 AP005433.1-202ENST00000580845 521 ntTSL 4 BASIC2.46□□□□□ -2.02
SCN4AP35499 LINC01930-201ENST00000602672 870 ntTSL 5 BASIC2.46□□□□□ -2.02
SCN4AP35499 AL353811.1-201ENST00000602851 736 ntTSL 5 BASIC2.46□□□□□ -2.02
SCN4AP35499 AC120053.1-201ENST00000607706 736 ntBASIC2.46□□□□□ -2.02
SCN4AP35499 KBTBD2-208ENST00000621876 1196 ntTSL 5 BASIC2.46□□□□□ -2.02
SCN4AP35499 AP003171.2-202ENST00000634657 355 ntTSL 5 BASIC2.46□□□□□ -2.02
SCN4AP35499 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC2.46□□□□□ -2.02
SCN4AP35499 MTND4P8-201ENST00000514997 1362 ntBASIC2.46□□□□□ -2.02
SCN4AP35499 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC2.45□□□□□ -2.02
SCN4AP35499 RNU6-1293P-201ENST00000384077 107 ntBASIC2.45□□□□□ -2.02
SCN4AP35499 GUCA1C-202ENST00000393963 900 ntTSL 1 (best) BASIC2.45□□□□□ -2.02
SCN4AP35499 RNU2-42P-201ENST00000410697 113 ntBASIC2.45□□□□□ -2.02
SCN4AP35499 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC2.45□□□□□ -2.02
SCN4AP35499 AC005165.1-203ENST00000423689 1281 ntTSL 3 BASIC2.45□□□□□ -2.02
SCN4AP35499 RPP40P1-201ENST00000426762 456 ntBASIC2.45□□□□□ -2.02
SCN4AP35499 MTCYBP15-201ENST00000433123 1127 ntBASIC2.45□□□□□ -2.02
SCN4AP35499 AC064874.1-202ENST00000440101 287 ntTSL 3 BASIC2.45□□□□□ -2.02
SCN4AP35499 LINC01986-201ENST00000440867 590 ntTSL 5 BASIC2.45□□□□□ -2.02
SCN4AP35499 RPL23AP16-201ENST00000441715 421 ntBASIC2.45□□□□□ -2.02
SCN4AP35499 AC009158.1-205ENST00000452511 895 ntTSL 3 BASIC2.45□□□□□ -2.02
SCN4AP35499 AC140059.1-201ENST00000489238 361 ntBASIC2.45□□□□□ -2.02
SCN4AP35499 AC093752.1-206ENST00000511823 336 ntBASIC2.45□□□□□ -2.02
SCN4AP35499 HIGD1AP6-201ENST00000521833 279 ntBASIC2.45□□□□□ -2.02
SCN4AP35499 AC004217.2-201ENST00000547401 751 ntTSL 3 BASIC2.45□□□□□ -2.02
SCN4AP35499 ALDH3A2-208ENST00000571163 590 ntTSL 5 BASIC2.45□□□□□ -2.02
SCN4AP35499 AF129408.1-201ENST00000608767 431 ntBASIC2.45□□□□□ -2.02
SCN4AP35499 RNU6-156P-201ENST00000621869 107 ntBASIC2.45□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 80.8 ms