Protein–RNA interactions for Protein: P30408

TM4SF1, Transmembrane 4 L6 family member 1, humanhuman

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF1P30408 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
TM4SF1P30408 RNU6-851P-201ENST00000384565 107 ntBASIC3.77□□□□□ -1.81
TM4SF1P30408 MTCO1P39-201ENST00000426148 480 ntBASIC3.77□□□□□ -1.81
TM4SF1P30408 RPL21P40-201ENST00000428586 483 ntBASIC3.77□□□□□ -1.81
TM4SF1P30408 MTATP6P17-201ENST00000431030 672 ntBASIC3.77□□□□□ -1.81
TM4SF1P30408 RPL7P34-201ENST00000433316 712 ntBASIC3.77□□□□□ -1.81
TM4SF1P30408 THAP5P1-201ENST00000439089 262 ntBASIC3.77□□□□□ -1.81
TM4SF1P30408 AP1S3-208ENST00000446015 499 ntAPPRIS ALT1 TSL 1 (best) BASIC3.77□□□□□ -1.81
TM4SF1P30408 AP000542.1-201ENST00000448473 371 ntBASIC3.77□□□□□ -1.81
TM4SF1P30408 HMGB1P36-201ENST00000487709 576 ntBASIC3.77□□□□□ -1.81
TM4SF1P30408 RPF2P2-201ENST00000504693 896 ntBASIC3.77□□□□□ -1.81
TM4SF1P30408 AC114967.1-201ENST00000504890 259 ntBASIC3.77□□□□□ -1.81
TM4SF1P30408 NREP-AS1-202ENST00000507222 610 ntTSL 3 BASIC3.77□□□□□ -1.81
TM4SF1P30408 NDUFB4P9-201ENST00000511646 388 ntBASIC3.77□□□□□ -1.81
TM4SF1P30408 AC105914.1-201ENST00000511798 226 ntBASIC3.77□□□□□ -1.81
TM4SF1P30408 OCIAD1-AS1-201ENST00000513576 265 ntTSL 3 BASIC3.77□□□□□ -1.81
TM4SF1P30408 SCGB1D5P-201ENST00000515134 247 ntBASIC3.77□□□□□ -1.81
TM4SF1P30408 SCARNA20.6-201ENST00000517251 106 ntBASIC3.77□□□□□ -1.81
TM4SF1P30408 AC090739.1-201ENST00000522190 708 ntTSL 3 BASIC3.77□□□□□ -1.81
TM4SF1P30408 AP001804.3-201ENST00000525146 880 ntBASIC3.77□□□□□ -1.81
TM4SF1P30408 AC013828.2-201ENST00000532487 235 ntBASIC3.77□□□□□ -1.81
TM4SF1P30408 AL359237.1-201ENST00000554305 826 ntTSL 5 BASIC3.77□□□□□ -1.81
TM4SF1P30408 AL391156.1-201ENST00000554965 554 ntBASIC3.77□□□□□ -1.81
TM4SF1P30408 SLC12A1-210ENST00000561031 735 ntTSL 2 BASIC3.77□□□□□ -1.81
TM4SF1P30408 AC118755.1-201ENST00000572923 195 ntTSL 3 BASIC3.77□□□□□ -1.81
TM4SF1P30408 ZNF573-209ENST00000585724 453 ntTSL 5 BASIC3.77□□□□□ -1.81
TM4SF1P30408 AL158211.4-201ENST00000606988 584 ntBASIC3.77□□□□□ -1.81
TM4SF1P30408 Metazoa_SRP.117-201ENST00000615106 292 ntBASIC3.77□□□□□ -1.81
TM4SF1P30408 AL603755.1-201ENST00000619504 163 ntBASIC3.77□□□□□ -1.81
TM4SF1P30408 AC009268.2-201ENST00000621925 457 ntBASIC3.77□□□□□ -1.81
TM4SF1P30408 AC120349.3-201ENST00000624377 529 ntBASIC3.77□□□□□ -1.81
TM4SF1P30408 LRRC39-203ENST00000370138 1466 ntTSL 5 BASIC3.77□□□□□ -1.81
TM4SF1P30408 RTKN2-201ENST00000315289 2383 ntTSL 2 BASIC3.77□□□□□ -1.81
TM4SF1P30408 AC007496.3-201ENST00000624987 3443 ntBASIC3.77□□□□□ -1.81
TM4SF1P30408 AC005832.2-201ENST00000538921 1430 ntBASIC3.77□□□□□ -1.81
TM4SF1P30408 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
TM4SF1P30408 AC005183.1-201ENST00000603687 1979 ntBASIC3.76□□□□□ -1.81
TM4SF1P30408 AC096644.4-201ENST00000563417 2912 ntBASIC3.76□□□□□ -1.81
TM4SF1P30408 RNY4P24-201ENST00000362735 96 ntBASIC3.76□□□□□ -1.81
TM4SF1P30408 C1orf100-202ENST00000366537 483 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
TM4SF1P30408 MIR135A2-201ENST00000384854 100 ntBASIC3.76□□□□□ -1.81
TM4SF1P30408 AL645937.4-201ENST00000419702 389 ntTSL 2 BASIC3.76□□□□□ -1.81
TM4SF1P30408 AL365203.2-201ENST00000423444 196 ntBASIC3.76□□□□□ -1.81
TM4SF1P30408 LINC01799-202ENST00000426260 625 ntTSL 3 BASIC3.76□□□□□ -1.81
TM4SF1P30408 AC063976.3-201ENST00000426849 329 ntBASIC3.76□□□□□ -1.81
TM4SF1P30408 AL022396.1-201ENST00000427011 386 ntTSL 3 BASIC3.76□□□□□ -1.81
TM4SF1P30408 AC017048.2-201ENST00000431455 822 ntTSL 3 BASIC3.76□□□□□ -1.81
TM4SF1P30408 AL731568.1-201ENST00000445111 434 ntTSL 2 BASIC3.76□□□□□ -1.81
TM4SF1P30408 MIR217HG-201ENST00000446139 900 ntTSL 5 BASIC3.76□□□□□ -1.81
TM4SF1P30408 RPL37P4-201ENST00000448908 268 ntBASIC3.76□□□□□ -1.81
TM4SF1P30408 OR6C5P-201ENST00000452388 923 ntBASIC3.76□□□□□ -1.81
TM4SF1P30408 AL121877.1-201ENST00000453704 622 ntBASIC3.76□□□□□ -1.81
TM4SF1P30408 PCCA-AS1-203ENST00000455958 356 ntTSL 3 BASIC3.76□□□□□ -1.81
TM4SF1P30408 CEACAMP4-201ENST00000457676 421 ntBASIC3.76□□□□□ -1.81
TM4SF1P30408 RPL30P9-201ENST00000465586 330 ntBASIC3.76□□□□□ -1.81
TM4SF1P30408 BZW1P2-201ENST00000473537 826 ntBASIC3.76□□□□□ -1.81
TM4SF1P30408 AC126389.1-201ENST00000477436 290 ntBASIC3.76□□□□□ -1.81
TM4SF1P30408 AC068587.2-201ENST00000478386 781 ntBASIC3.76□□□□□ -1.81
TM4SF1P30408 AC092059.1-201ENST00000485347 429 ntTSL 3 BASIC3.76□□□□□ -1.81
TM4SF1P30408 LINC01846-201ENST00000505908 651 ntTSL 5 BASIC3.76□□□□□ -1.81
TM4SF1P30408 AC091906.1-201ENST00000511310 391 ntTSL 2 BASIC3.76□□□□□ -1.81
TM4SF1P30408 AC098868.1-201ENST00000512628 624 ntTSL 2 BASIC3.76□□□□□ -1.81
TM4SF1P30408 AC093879.2-201ENST00000513645 427 ntTSL 3 BASIC3.76□□□□□ -1.81
TM4SF1P30408 SNORA31.8-201ENST00000516327 108 ntBASIC3.76□□□□□ -1.81
TM4SF1P30408 RNU6-232P-201ENST00000517144 64 ntBASIC3.76□□□□□ -1.81
TM4SF1P30408 NARSP2-202ENST00000522022 349 ntTSL 3 BASIC3.76□□□□□ -1.81
TM4SF1P30408 PIGY-201ENST00000527353 217 ntAPPRIS P1 BASIC3.76□□□□□ -1.81
TM4SF1P30408 AL133166.1-201ENST00000551040 1034 ntTSL 4 BASIC3.76□□□□□ -1.81
TM4SF1P30408 AF099810.1-201ENST00000554219 525 ntTSL 3 BASIC3.76□□□□□ -1.81
TM4SF1P30408 AC012435.1-202ENST00000568772 240 ntBASIC3.76□□□□□ -1.81
TM4SF1P30408 AP005059.2-201ENST00000577527 578 ntTSL 3 BASIC3.76□□□□□ -1.81
TM4SF1P30408 AC008946.1-201ENST00000599756 421 ntTSL 3 BASIC3.76□□□□□ -1.81
TM4SF1P30408 AL357094.1-201ENST00000603845 844 ntBASIC3.76□□□□□ -1.81
TM4SF1P30408 AC097468.3-201ENST00000607956 456 ntBASIC3.76□□□□□ -1.81
TM4SF1P30408 AP002826.1-201ENST00000608835 315 ntBASIC3.76□□□□□ -1.81
TM4SF1P30408 AC079248.2-201ENST00000623779 326 ntBASIC3.76□□□□□ -1.81
TM4SF1P30408 AC091903.1-201ENST00000624322 454 ntBASIC3.76□□□□□ -1.81
TM4SF1P30408 AC010149.2-201ENST00000637608 315 ntBASIC3.76□□□□□ -1.81
TM4SF1P30408 NANOGNB-202ENST00000640040 824 ntAPPRIS ALT2 TSL 5 BASIC3.76□□□□□ -1.81
TM4SF1P30408 SERPINA7-201ENST00000327674 2642 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
TM4SF1P30408 UACA-202ENST00000379983 4859 ntAPPRIS ALT2 TSL 5 BASIC3.76□□□□□ -1.81
TM4SF1P30408 FBXL13-204ENST00000436908 2577 ntTSL 5 BASIC3.76□□□□□ -1.81
TM4SF1P30408 PLEKHG7-203ENST00000638590 3267 ntAPPRIS P1 TSL 2 BASIC3.76□□□□□ -1.81
TM4SF1P30408 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC3.76□□□□□ -1.81
TM4SF1P30408 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC3.76□□□□□ -1.81
TM4SF1P30408 DMD-230ENST00000620040 13746 ntAPPRIS ALT2 TSL 5 BASIC3.76□□□□□ -1.81
TM4SF1P30408 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC3.75□□□□□ -1.81
TM4SF1P30408 KIF21A-203ENST00000541463 4866 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
TM4SF1P30408 AC066616.2-201ENST00000559334 1481 ntBASIC3.75□□□□□ -1.81
TM4SF1P30408 PDCL2-201ENST00000295645 861 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
TM4SF1P30408 KLRF1-202ENST00000354855 838 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
TM4SF1P30408 RNU6-433P-201ENST00000363216 104 ntBASIC3.75□□□□□ -1.81
TM4SF1P30408 SNORD6-201ENST00000365444 73 ntBASIC3.75□□□□□ -1.81
TM4SF1P30408 C20orf187-201ENST00000378252 446 ntTSL 2 BASIC3.75□□□□□ -1.81
TM4SF1P30408 MIR1261-201ENST00000408659 82 ntBASIC3.75□□□□□ -1.81
TM4SF1P30408 TPMTP3-201ENST00000411928 735 ntBASIC3.75□□□□□ -1.81
TM4SF1P30408 AL391704.1-203ENST00000414903 462 ntTSL 3 BASIC3.75□□□□□ -1.81
TM4SF1P30408 SSXP9-201ENST00000417503 292 ntBASIC3.75□□□□□ -1.81
TM4SF1P30408 AL021026.1-201ENST00000422841 658 ntTSL 3 BASIC3.75□□□□□ -1.81
TM4SF1P30408 AL606534.3-201ENST00000437499 373 ntTSL 5 BASIC3.75□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 110.5 ms