Protein–RNA interactions for Protein: P29973

CNGA1, cGMP-gated cation channel alpha-1, humanhuman

Predictions only

Length 690 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNGA1P29973 SNORA51.2-201ENST00000364595 132 ntBASIC4.67□□□□□ -1.66
CNGA1P29973 SNORA73.2-201ENST00000364946 201 ntBASIC4.67□□□□□ -1.66
CNGA1P29973 RNU6-456P-201ENST00000384493 107 ntBASIC4.67□□□□□ -1.66
CNGA1P29973 Y_RNA.554-201ENST00000384672 102 ntBASIC4.67□□□□□ -1.66
CNGA1P29973 RNA5SP39-201ENST00000411245 120 ntBASIC4.67□□□□□ -1.66
CNGA1P29973 AC009237.5-201ENST00000414271 501 ntBASIC4.67□□□□□ -1.66
CNGA1P29973 DPPA2P1-201ENST00000428060 556 ntBASIC4.67□□□□□ -1.66
CNGA1P29973 UBE2V1P8-201ENST00000437166 265 ntBASIC4.67□□□□□ -1.66
CNGA1P29973 RPS4XP4-201ENST00000443195 763 ntBASIC4.67□□□□□ -1.66
CNGA1P29973 AC079781.2-201ENST00000446424 169 ntBASIC4.67□□□□□ -1.66
CNGA1P29973 SNRPGP6-201ENST00000451124 220 ntBASIC4.67□□□□□ -1.66
CNGA1P29973 AC003071.1-201ENST00000451219 789 ntBASIC4.67□□□□□ -1.66
CNGA1P29973 PRSS3P4-201ENST00000453323 162 ntBASIC4.67□□□□□ -1.66
CNGA1P29973 AC013267.1-201ENST00000458227 267 ntBASIC4.67□□□□□ -1.66
CNGA1P29973 AC010631.1-201ENST00000474150 156 ntBASIC4.67□□□□□ -1.66
CNGA1P29973 AC108860.1-201ENST00000484521 383 ntBASIC4.67□□□□□ -1.66
CNGA1P29973 RNU7-51P-201ENST00000516560 62 ntBASIC4.67□□□□□ -1.66
CNGA1P29973 RNU6-410P-201ENST00000517006 107 ntBASIC4.67□□□□□ -1.66
CNGA1P29973 AP004242.1-201ENST00000533701 349 ntBASIC4.67□□□□□ -1.66
CNGA1P29973 AC092718.6-202ENST00000563072 408 ntTSL 2 BASIC4.67□□□□□ -1.66
CNGA1P29973 LIVAR-201ENST00000578633 384 ntTSL 3 BASIC4.67□□□□□ -1.66
CNGA1P29973 AF038458.1-201ENST00000588406 262 ntBASIC4.67□□□□□ -1.66
CNGA1P29973 AC017083.3-201ENST00000609955 700 ntBASIC4.67□□□□□ -1.66
CNGA1P29973 AL355810.1-201ENST00000614629 552 ntBASIC4.67□□□□□ -1.66
CNGA1P29973 AC090517.2-201ENST00000614966 680 ntBASIC4.67□□□□□ -1.66
CNGA1P29973 AC008781.3-201ENST00000622826 335 ntTSL 2 BASIC4.67□□□□□ -1.66
CNGA1P29973 AC009161.2-201ENST00000624626 138 ntBASIC4.67□□□□□ -1.66
CNGA1P29973 AC105074.1-201ENST00000623380 3095 ntBASIC4.67□□□□□ -1.66
CNGA1P29973 SMC1B-201ENST00000357450 4201 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
CNGA1P29973 NLGN1-206ENST00000457714 8242 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
CNGA1P29973 PICALM-209ENST00000528398 2049 ntTSL 2 BASIC4.67□□□□□ -1.66
CNGA1P29973 ZPLD1-202ENST00000466937 1531 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
CNGA1P29973 LUM-201ENST00000266718 3008 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
CNGA1P29973 PIGN-210ENST00000588571 1960 ntTSL 5 BASIC4.66□□□□□ -1.66
CNGA1P29973 ZNF594-201ENST00000399604 4862 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
CNGA1P29973 ANKRD36C-202ENST00000456556 5428 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
CNGA1P29973 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC4.66□□□□□ -1.66
CNGA1P29973 LINC00305-201ENST00000323355 873 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
CNGA1P29973 Y_RNA.22-201ENST00000362492 102 ntBASIC4.66□□□□□ -1.66
CNGA1P29973 MIR558-201ENST00000384920 94 ntBASIC4.66□□□□□ -1.66
CNGA1P29973 ZC3H7A-202ENST00000396516 3845 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
CNGA1P29973 AC005162.2-201ENST00000411479 578 ntTSL 4 BASIC4.66□□□□□ -1.66
CNGA1P29973 AL161631.1-201ENST00000417933 486 ntBASIC4.66□□□□□ -1.66
CNGA1P29973 AL136369.2-201ENST00000420825 537 ntTSL 3 BASIC4.66□□□□□ -1.66
CNGA1P29973 USP9YP18-201ENST00000425912 695 ntBASIC4.66□□□□□ -1.66
CNGA1P29973 RPL21P66-201ENST00000426566 466 ntBASIC4.66□□□□□ -1.66
CNGA1P29973 OR2AS1P-201ENST00000427827 319 ntBASIC4.66□□□□□ -1.66
CNGA1P29973 AL160411.1-201ENST00000429853 400 ntTSL 2 BASIC4.66□□□□□ -1.66
CNGA1P29973 RPL23AP30-201ENST00000432419 501 ntBASIC4.66□□□□□ -1.66
CNGA1P29973 RPS6P12-201ENST00000432491 726 ntBASIC4.66□□□□□ -1.66
CNGA1P29973 NOTCH2P1-201ENST00000443481 624 ntBASIC4.66□□□□□ -1.66
CNGA1P29973 RPL23AP31-201ENST00000456160 467 ntBASIC4.66□□□□□ -1.66
CNGA1P29973 SNORD97-201ENST00000459187 142 ntBASIC4.66□□□□□ -1.66
CNGA1P29973 AC092059.1-201ENST00000485347 429 ntTSL 3 BASIC4.66□□□□□ -1.66
CNGA1P29973 AC079382.1-201ENST00000493346 557 ntBASIC4.66□□□□□ -1.66
CNGA1P29973 NIPA2P2-201ENST00000496376 1083 ntBASIC4.66□□□□□ -1.66
CNGA1P29973 ARL4AP2-201ENST00000507378 601 ntBASIC4.66□□□□□ -1.66
CNGA1P29973 LINC01969-201ENST00000514468 455 ntTSL 3 BASIC4.66□□□□□ -1.66
CNGA1P29973 TRAPPC2P2-201ENST00000517589 409 ntBASIC4.66□□□□□ -1.66
CNGA1P29973 AP003469.3-201ENST00000518090 473 ntTSL 3 BASIC4.66□□□□□ -1.66
CNGA1P29973 AC060765.1-201ENST00000522776 544 ntTSL 4 BASIC4.66□□□□□ -1.66
CNGA1P29973 KIRREL3-AS2-201ENST00000532988 492 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
CNGA1P29973 AP003034.1-201ENST00000534621 422 ntBASIC4.66□□□□□ -1.66
CNGA1P29973 AL355922.1-201ENST00000555624 337 ntTSL 3 BASIC4.66□□□□□ -1.66
CNGA1P29973 OR4H12P-201ENST00000556269 907 ntBASIC4.66□□□□□ -1.66
CNGA1P29973 LINC01146-208ENST00000557355 548 ntTSL 4 BASIC4.66□□□□□ -1.66
CNGA1P29973 RPL21P12-201ENST00000559810 515 ntBASIC4.66□□□□□ -1.66
CNGA1P29973 AC105094.1-201ENST00000588245 316 ntTSL 3 BASIC4.66□□□□□ -1.66
CNGA1P29973 AP001172.2-201ENST00000602454 467 ntTSL 5 BASIC4.66□□□□□ -1.66
CNGA1P29973 AP002360.4-201ENST00000606980 481 ntBASIC4.66□□□□□ -1.66
CNGA1P29973 AC098617.1-203ENST00000609865 277 ntTSL 5 BASIC4.66□□□□□ -1.66
CNGA1P29973 SMCR2_2.1-201ENST00000619783 161 ntBASIC4.66□□□□□ -1.66
CNGA1P29973 AC091953.5-201ENST00000622919 233 ntBASIC4.66□□□□□ -1.66
CNGA1P29973 CLHC1-201ENST00000401408 2248 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
CNGA1P29973 AL591441.1-201ENST00000618108 2247 ntTSL 2 BASIC4.66□□□□□ -1.66
CNGA1P29973 C6orf10-203ENST00000442822 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC4.66□□□□□ -1.66
CNGA1P29973 RAPH1-203ENST00000374493 3909 ntAPPRIS ALT2 TSL 5 BASIC4.66□□□□□ -1.66
CNGA1P29973 GDAP2-202ENST00000369443 8828 ntAPPRIS P1 TSL 2 BASIC4.66□□□□□ -1.66
CNGA1P29973 ASAH2-201ENST00000329428 2184 ntTSL 1 (best) BASIC4.65□□□□□ -1.66
CNGA1P29973 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
CNGA1P29973 MTTP-201ENST00000265517 4037 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
CNGA1P29973 POLK-201ENST00000241436 5911 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
CNGA1P29973 LGI1-210ENST00000629035 2251 ntTSL 5 BASIC4.65□□□□□ -1.66
CNGA1P29973 PNPT1P2-201ENST00000456768 2050 ntBASIC4.65□□□□□ -1.66
CNGA1P29973 AL353746.1-201ENST00000566293 6881 ntBASIC4.65□□□□□ -1.66
CNGA1P29973 FAN1-202ENST00000561594 2738 ntTSL 1 (best) BASIC4.65□□□□□ -1.66
CNGA1P29973 RNU6-600P-201ENST00000362524 99 ntBASIC4.65□□□□□ -1.67
CNGA1P29973 RNU5E-6P-201ENST00000365574 115 ntBASIC4.65□□□□□ -1.67
CNGA1P29973 AKAP14-203ENST00000371425 793 ntAPPRIS ALT2 TSL 5 BASIC4.65□□□□□ -1.67
CNGA1P29973 RNU1-39P-201ENST00000383897 165 ntBASIC4.65□□□□□ -1.67
CNGA1P29973 SNORA36C-201ENST00000384289 132 ntBASIC4.65□□□□□ -1.67
CNGA1P29973 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC4.65□□□□□ -1.67
CNGA1P29973 TXNP7-201ENST00000406296 293 ntBASIC4.65□□□□□ -1.67
CNGA1P29973 SNORA57.3-201ENST00000411095 141 ntBASIC4.65□□□□□ -1.67
CNGA1P29973 AC092941.1-201ENST00000415940 427 ntTSL 5 BASIC4.65□□□□□ -1.67
CNGA1P29973 MTATP6P18-201ENST00000417994 673 ntBASIC4.65□□□□□ -1.67
CNGA1P29973 AL589765.2-201ENST00000420382 424 ntTSL 3 BASIC4.65□□□□□ -1.67
CNGA1P29973 LINC01351-201ENST00000424735 526 ntTSL 2 BASIC4.65□□□□□ -1.67
CNGA1P29973 MED13P1-201ENST00000428342 171 ntBASIC4.65□□□□□ -1.67
CNGA1P29973 USP12PX-201ENST00000432383 1057 ntBASIC4.65□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 95.1 ms