Protein–RNA interactions for Protein: P29400

COL4A5, Collagen alpha-5(IV) chain, humanhuman

Predictions only

Length 1,685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5P29400 AL078590.1-201ENST00000412602 479 ntTSL 3 BASIC1.99□□□□□ -2.09
COL4A5P29400 RPS3AP9-201ENST00000417027 792 ntBASIC1.99□□□□□ -2.09
COL4A5P29400 MTCO3P4-201ENST00000419236 787 ntBASIC1.99□□□□□ -2.09
COL4A5P29400 RPS15AP40-201ENST00000419621 391 ntBASIC1.99□□□□□ -2.09
COL4A5P29400 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC1.99□□□□□ -2.09
COL4A5P29400 PCCA-AS1-203ENST00000455958 356 ntTSL 3 BASIC1.99□□□□□ -2.09
COL4A5P29400 MTCO3P42-201ENST00000509488 518 ntBASIC1.99□□□□□ -2.09
COL4A5P29400 AC109471.1-201ENST00000511631 612 ntBASIC1.99□□□□□ -2.09
COL4A5P29400 AC008494.2-201ENST00000514544 370 ntBASIC1.99□□□□□ -2.09
COL4A5P29400 MTCO3P39-201ENST00000514812 518 ntBASIC1.99□□□□□ -2.09
COL4A5P29400 MTND5P4-201ENST00000514978 288 ntBASIC1.99□□□□□ -2.09
COL4A5P29400 SNORA31.15-201ENST00000516771 132 ntBASIC1.99□□□□□ -2.09
COL4A5P29400 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC1.99□□□□□ -2.09
COL4A5P29400 AC027104.1-201ENST00000563702 681 ntBASIC1.99□□□□□ -2.09
COL4A5P29400 SMG1P7-203ENST00000573141 619 ntTSL 2 BASIC1.99□□□□□ -2.09
COL4A5P29400 AP005057.1-201ENST00000583827 574 ntTSL 4 BASIC1.99□□□□□ -2.09
COL4A5P29400 AC009220.3-201ENST00000604318 586 ntBASIC1.99□□□□□ -2.09
COL4A5P29400 LINC02246-204ENST00000625278 740 ntTSL 5 BASIC1.99□□□□□ -2.09
COL4A5P29400 SNORA50A-202ENST00000629536 136 ntBASIC1.99□□□□□ -2.09
COL4A5P29400 HPVC1-201ENST00000629899 1198 ntBASIC1.99□□□□□ -2.09
COL4A5P29400 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.99□□□□□ -2.09
COL4A5P29400 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC1.99□□□□□ -2.09
COL4A5P29400 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC1.99□□□□□ -2.09
COL4A5P29400 LINC02510-201ENST00000509798 1576 ntTSL 1 (best) BASIC1.99□□□□□ -2.09
COL4A5P29400 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC1.99□□□□□ -2.09
COL4A5P29400 API5P2-201ENST00000397055 1498 ntBASIC1.99□□□□□ -2.09
COL4A5P29400 POLK-204ENST00000504026 1484 ntTSL 1 (best) BASIC1.99□□□□□ -2.09
COL4A5P29400 RNU6-50P-201ENST00000362356 103 ntBASIC1.99□□□□□ -2.09
COL4A5P29400 RNU6-600P-201ENST00000362524 99 ntBASIC1.99□□□□□ -2.09
COL4A5P29400 RNU1-42P-201ENST00000364033 160 ntBASIC1.99□□□□□ -2.09
COL4A5P29400 MIR7-1-201ENST00000384871 110 ntBASIC1.99□□□□□ -2.09
COL4A5P29400 MIR1303-201ENST00000408625 86 ntBASIC1.99□□□□□ -2.09
COL4A5P29400 AC114973.1-201ENST00000429057 632 ntBASIC1.99□□□□□ -2.09
COL4A5P29400 LINC01078-201ENST00000434832 387 ntTSL 5 BASIC1.99□□□□□ -2.09
COL4A5P29400 AC069439.2-201ENST00000496403 789 ntTSL 2 BASIC1.99□□□□□ -2.09
COL4A5P29400 AC109464.2-201ENST00000510242 943 ntBASIC1.99□□□□□ -2.09
COL4A5P29400 AC010280.1-201ENST00000515199 340 ntTSL 2 BASIC1.99□□□□□ -2.09
COL4A5P29400 MTND2P26-201ENST00000528255 1029 ntBASIC1.99□□□□□ -2.09
COL4A5P29400 AC107882.1-201ENST00000530837 477 ntTSL 3 BASIC1.99□□□□□ -2.09
COL4A5P29400 LINC01479-201ENST00000545520 509 ntTSL 2 BASIC1.99□□□□□ -2.09
COL4A5P29400 RPL23AP78-201ENST00000599928 470 ntBASIC1.99□□□□□ -2.09
COL4A5P29400 RMST_6.1-201ENST00000611980 203 ntBASIC1.99□□□□□ -2.09
COL4A5P29400 AC022709.1-201ENST00000615967 87 ntBASIC1.99□□□□□ -2.09
COL4A5P29400 SYT14-204ENST00000472886 2966 ntAPPRIS P3 TSL 1 (best) BASIC1.98□□□□□ -2.09
COL4A5P29400 NUP35-203ENST00000409798 1470 ntTSL 2 BASIC1.98□□□□□ -2.09
COL4A5P29400 RNU6-60P-201ENST00000364792 103 ntBASIC1.98□□□□□ -2.09
COL4A5P29400 RNU6-1-201ENST00000383898 107 ntBASIC1.98□□□□□ -2.09
COL4A5P29400 RNU6-42P-201ENST00000384165 107 ntBASIC1.98□□□□□ -2.09
COL4A5P29400 RNU6-36P-201ENST00000384172 107 ntBASIC1.98□□□□□ -2.09
COL4A5P29400 RNU6-4P-201ENST00000384205 107 ntBASIC1.98□□□□□ -2.09
COL4A5P29400 RNU6-5P-201ENST00000384238 107 ntBASIC1.98□□□□□ -2.09
COL4A5P29400 RNU6-3P-201ENST00000384314 107 ntBASIC1.98□□□□□ -2.09
COL4A5P29400 RNU6-2-201ENST00000384627 107 ntBASIC1.98□□□□□ -2.09
COL4A5P29400 RNU6-9-201ENST00000384776 107 ntBASIC1.98□□□□□ -2.09
COL4A5P29400 RNU6-33P-201ENST00000384793 107 ntBASIC1.98□□□□□ -2.09
COL4A5P29400 NUP35P2-201ENST00000416748 943 ntBASIC1.98□□□□□ -2.09
COL4A5P29400 MTND2P16-201ENST00000419987 799 ntBASIC1.98□□□□□ -2.09
COL4A5P29400 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC1.98□□□□□ -2.09
COL4A5P29400 XKRYP6-201ENST00000440468 1116 ntBASIC1.98□□□□□ -2.09
COL4A5P29400 XKRYP3-201ENST00000442113 1116 ntBASIC1.98□□□□□ -2.09
COL4A5P29400 AP002345.1-201ENST00000456493 928 ntBASIC1.98□□□□□ -2.09
COL4A5P29400 AMD1P1-201ENST00000457220 922 ntBASIC1.98□□□□□ -2.09
COL4A5P29400 AC108734.3-201ENST00000481241 1165 ntBASIC1.98□□□□□ -2.09
COL4A5P29400 MTND3P6-201ENST00000485242 339 ntBASIC1.98□□□□□ -2.09
COL4A5P29400 AC011773.2-201ENST00000551479 285 ntTSL 5 BASIC1.98□□□□□ -2.09
COL4A5P29400 LINC02301-203ENST00000555798 789 ntTSL 3 BASIC1.98□□□□□ -2.09
COL4A5P29400 CMC2-208ENST00000564249 890 ntAPPRIS P1 TSL 5 BASIC1.98□□□□□ -2.09
COL4A5P29400 AC124283.4-201ENST00000581815 456 ntBASIC1.98□□□□□ -2.09
COL4A5P29400 AC010511.1-202ENST00000590229 573 ntTSL 4 BASIC1.98□□□□□ -2.09
COL4A5P29400 AC245128.3-201ENST00000594721 748 ntBASIC1.98□□□□□ -2.09
COL4A5P29400 AC010320.2-202ENST00000599125 595 ntTSL 4 BASIC1.98□□□□□ -2.09
COL4A5P29400 AL355812.1-201ENST00000603215 216 ntBASIC1.98□□□□□ -2.09
COL4A5P29400 RNU6-6P-201ENST00000606623 107 ntBASIC1.98□□□□□ -2.09
COL4A5P29400 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC1.98□□□□□ -2.09
COL4A5P29400 RNF128-202ENST00000324342 2654 ntTSL 1 (best) BASIC1.97□□□□□ -2.09
COL4A5P29400 C11orf40-201ENST00000307616 654 ntAPPRIS P1 TSL 1 (best) BASIC1.97□□□□□ -2.09
COL4A5P29400 RNA5SP138-201ENST00000365098 114 ntBASIC1.97□□□□□ -2.09
COL4A5P29400 EEF1E1-BLOC1S5-201ENST00000397456 768 ntAPPRIS P1 TSL 3 BASIC1.97□□□□□ -2.09
COL4A5P29400 RNU2-21P-201ENST00000410368 188 ntBASIC1.97□□□□□ -2.09
COL4A5P29400 RPL17P12-201ENST00000413391 526 ntBASIC1.97□□□□□ -2.09
COL4A5P29400 HMGN2P20-201ENST00000437531 273 ntBASIC1.97□□□□□ -2.09
COL4A5P29400 RPL17P49-201ENST00000443728 411 ntBASIC1.97□□□□□ -2.09
COL4A5P29400 AC007395.1-201ENST00000451333 677 ntBASIC1.97□□□□□ -2.09
COL4A5P29400 AL137802.1-201ENST00000452795 327 ntTSL 5 BASIC1.97□□□□□ -2.09
COL4A5P29400 PPP1R2P5-201ENST00000457256 603 ntBASIC1.97□□□□□ -2.09
COL4A5P29400 AC104472.2-201ENST00000469035 601 ntBASIC1.97□□□□□ -2.09
COL4A5P29400 SYPL1P1-201ENST00000473622 768 ntBASIC1.97□□□□□ -2.09
COL4A5P29400 AC087190.1-201ENST00000484462 480 ntBASIC1.97□□□□□ -2.09
COL4A5P29400 CFAP44-AS1-202ENST00000498480 686 ntTSL 3 BASIC1.97□□□□□ -2.09
COL4A5P29400 AC093725.2-201ENST00000507808 356 ntTSL 2 BASIC1.97□□□□□ -2.09
COL4A5P29400 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC1.97□□□□□ -2.09
COL4A5P29400 AC090753.1-201ENST00000522087 331 ntTSL 3 BASIC1.97□□□□□ -2.09
COL4A5P29400 AC099520.1-205ENST00000524083 316 ntTSL 3 BASIC1.97□□□□□ -2.09
COL4A5P29400 AC011363.1-201ENST00000524198 458 ntTSL 5 BASIC1.97□□□□□ -2.09
COL4A5P29400 PRELID2P1-201ENST00000552837 301 ntBASIC1.97□□□□□ -2.09
COL4A5P29400 AC046158.1-201ENST00000563408 719 ntTSL 3 BASIC1.97□□□□□ -2.09
COL4A5P29400 AC015720.1-201ENST00000565251 277 ntBASIC1.97□□□□□ -2.09
COL4A5P29400 AC105094.2-203ENST00000590357 555 ntTSL 4 BASIC1.97□□□□□ -2.09
COL4A5P29400 AC022387.2-201ENST00000604050 448 ntBASIC1.97□□□□□ -2.09
COL4A5P29400 AL590099.1-201ENST00000615276 138 ntBASIC1.97□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 77.6 ms