Protein–RNA interactions for Protein: P28067

HLA-DMA, HLA class II histocompatibility antigen, DM alpha chain, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMAP28067 AC018904.1-201ENST00000560594 542 ntTSL 3 BASIC2.22□□□□□ -2.05
HLA-DMAP28067 MIR5708-201ENST00000579723 85 ntBASIC2.22□□□□□ -2.05
HLA-DMAP28067 MIR4658-201ENST00000584344 65 ntBASIC2.22□□□□□ -2.05
HLA-DMAP28067 AP005230.1-201ENST00000585072 675 ntTSL 5 BASIC2.22□□□□□ -2.05
HLA-DMAP28067 AC006539.2-201ENST00000601729 572 ntBASIC2.22□□□□□ -2.05
HLA-DMAP28067 AC018926.1-201ENST00000616335 435 ntBASIC2.22□□□□□ -2.05
HLA-DMAP28067 AL158163.2-201ENST00000619110 700 ntBASIC2.22□□□□□ -2.05
HLA-DMAP28067 MAGI2-AS3-224ENST00000619135 205 ntTSL 5 BASIC2.22□□□□□ -2.05
HLA-DMAP28067 AC012314.7-201ENST00000619693 93 ntBASIC2.22□□□□□ -2.05
HLA-DMAP28067 AL157770.1-201ENST00000623049 439 ntBASIC2.22□□□□□ -2.05
HLA-DMAP28067 AC010872.1-201ENST00000624225 675 ntBASIC2.22□□□□□ -2.05
HLA-DMAP28067 WARS-244ENST00000627608 123 ntTSL 5 BASIC2.22□□□□□ -2.05
HLA-DMAP28067 MIR203B-201ENST00000636080 86 ntBASIC2.22□□□□□ -2.05
HLA-DMAP28067 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC2.22□□□□□ -2.05
HLA-DMAP28067 OR4G11P-202ENST00000642116 1414 ntBASIC2.22□□□□□ -2.05
HLA-DMAP28067 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC2.21□□□□□ -2.05
HLA-DMAP28067 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC2.21□□□□□ -2.06
HLA-DMAP28067 AK9-201ENST00000285397 2566 ntTSL 1 (best) BASIC2.21□□□□□ -2.06
HLA-DMAP28067 AC022336.2-201ENST00000568966 2538 ntBASIC2.21□□□□□ -2.06
HLA-DMAP28067 HMGB1P5-201ENST00000255320 642 ntBASIC2.21□□□□□ -2.06
HLA-DMAP28067 ZBTB8OSP1-201ENST00000342688 498 ntBASIC2.21□□□□□ -2.06
HLA-DMAP28067 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC2.21□□□□□ -2.06
HLA-DMAP28067 RNA5SP267-201ENST00000364893 126 ntBASIC2.21□□□□□ -2.06
HLA-DMAP28067 RN7SKP226-201ENST00000364912 300 ntBASIC2.21□□□□□ -2.06
HLA-DMAP28067 RPL7P27-201ENST00000403775 720 ntBASIC2.21□□□□□ -2.06
HLA-DMAP28067 ERMN-204ENST00000409925 556 ntTSL 4 BASIC2.21□□□□□ -2.06
HLA-DMAP28067 DBF4P1-201ENST00000412976 1892 ntBASIC2.21□□□□□ -2.06
HLA-DMAP28067 USP9YP21-201ENST00000420603 432 ntBASIC2.21□□□□□ -2.06
HLA-DMAP28067 AP003025.1-201ENST00000421650 149 ntTSL 1 (best) BASIC2.21□□□□□ -2.06
HLA-DMAP28067 BEND7P1-201ENST00000422058 457 ntBASIC2.21□□□□□ -2.06
HLA-DMAP28067 MTCO3P30-201ENST00000426425 670 ntBASIC2.21□□□□□ -2.06
HLA-DMAP28067 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC2.21□□□□□ -2.06
HLA-DMAP28067 LINC01052-201ENST00000437777 496 ntTSL 3 BASIC2.21□□□□□ -2.06
HLA-DMAP28067 MTCYBP42-201ENST00000444653 1130 ntBASIC2.21□□□□□ -2.06
HLA-DMAP28067 AC007953.1-201ENST00000450500 560 ntTSL 4 BASIC2.21□□□□□ -2.06
HLA-DMAP28067 PRSS3P4-201ENST00000453323 162 ntBASIC2.21□□□□□ -2.06
HLA-DMAP28067 AC096666.1-201ENST00000454965 348 ntTSL 3 BASIC2.21□□□□□ -2.06
HLA-DMAP28067 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC2.21□□□□□ -2.06
HLA-DMAP28067 GRM7-AS3-209ENST00000458713 454 ntTSL 3 BASIC2.21□□□□□ -2.06
HLA-DMAP28067 AC090096.1-201ENST00000489168 390 ntBASIC2.21□□□□□ -2.06
HLA-DMAP28067 AC069444.1-201ENST00000489428 266 ntTSL 3 BASIC2.21□□□□□ -2.06
HLA-DMAP28067 EIF4EP3-201ENST00000498782 656 ntBASIC2.21□□□□□ -2.06
HLA-DMAP28067 AC024579.1-201ENST00000503685 371 ntTSL 5 BASIC2.21□□□□□ -2.06
HLA-DMAP28067 LINC02447-203ENST00000504402 292 ntTSL 3 BASIC2.21□□□□□ -2.06
HLA-DMAP28067 HMGB3P3-201ENST00000510526 400 ntBASIC2.21□□□□□ -2.06
HLA-DMAP28067 SNORA19.3-201ENST00000516165 130 ntBASIC2.21□□□□□ -2.06
HLA-DMAP28067 RN7SKP57-201ENST00000517248 293 ntBASIC2.21□□□□□ -2.06
HLA-DMAP28067 AP003467.2-201ENST00000520175 319 ntBASIC2.21□□□□□ -2.06
HLA-DMAP28067 SDHAF2-203ENST00000534878 523 ntTSL 2 BASIC2.21□□□□□ -2.06
HLA-DMAP28067 AC007954.1-201ENST00000554198 494 ntBASIC2.21□□□□□ -2.06
HLA-DMAP28067 AL355773.1-201ENST00000554458 459 ntTSL 3 BASIC2.21□□□□□ -2.06
HLA-DMAP28067 GTF2IP8-201ENST00000560687 584 ntBASIC2.21□□□□□ -2.06
HLA-DMAP28067 ISCA1P3-201ENST00000577104 373 ntBASIC2.21□□□□□ -2.06
HLA-DMAP28067 MIR3158-1-201ENST00000583596 81 ntBASIC2.21□□□□□ -2.06
HLA-DMAP28067 AL031176.1-201ENST00000604554 466 ntBASIC2.21□□□□□ -2.06
HLA-DMAP28067 AP002802.2-201ENST00000605877 235 ntBASIC2.21□□□□□ -2.06
HLA-DMAP28067 AC009902.3-201ENST00000606235 2172 ntBASIC2.21□□□□□ -2.06
HLA-DMAP28067 AC135507.1-201ENST00000607214 561 ntBASIC2.21□□□□□ -2.06
HLA-DMAP28067 AC009237.15-201ENST00000610252 501 ntBASIC2.21□□□□□ -2.06
HLA-DMAP28067 MIR6895-201ENST00000613497 78 ntBASIC2.21□□□□□ -2.06
HLA-DMAP28067 AC007527.2-201ENST00000621825 546 ntTSL 5 BASIC2.21□□□□□ -2.06
HLA-DMAP28067 VPS8-228ENST00000628962 207 ntTSL 5 BASIC2.21□□□□□ -2.06
HLA-DMAP28067 U6.101-201ENST00000637707 76 ntBASIC2.21□□□□□ -2.06
HLA-DMAP28067 NANOGNB-202ENST00000640040 824 ntAPPRIS ALT2 TSL 5 BASIC2.21□□□□□ -2.06
HLA-DMAP28067 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC2.21□□□□□ -2.06
HLA-DMAP28067 ZNF720P1-201ENST00000562403 1939 ntBASIC2.21□□□□□ -2.06
HLA-DMAP28067 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC2.2□□□□□ -2.06
HLA-DMAP28067 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
HLA-DMAP28067 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
HLA-DMAP28067 AL139276.1-201ENST00000311910 1001 ntBASIC2.2□□□□□ -2.06
HLA-DMAP28067 OR4P4-201ENST00000314612 939 ntAPPRIS P1 BASIC2.2□□□□□ -2.06
HLA-DMAP28067 RPL21P132-201ENST00000331267 462 ntBASIC2.2□□□□□ -2.06
HLA-DMAP28067 CASP1-201ENST00000353247 423 ntTSL 1 (best) BASIC2.2□□□□□ -2.06
HLA-DMAP28067 LINC00587-201ENST00000374801 590 ntTSL 1 (best) BASIC2.2□□□□□ -2.06
HLA-DMAP28067 RNU6-878P-201ENST00000384578 110 ntBASIC2.2□□□□□ -2.06
HLA-DMAP28067 MIR449B-201ENST00000384995 97 ntBASIC2.2□□□□□ -2.06
HLA-DMAP28067 SNRPEP2-201ENST00000397592 279 ntBASIC2.2□□□□□ -2.06
HLA-DMAP28067 AL122016.1-201ENST00000403365 367 ntBASIC2.2□□□□□ -2.06
HLA-DMAP28067 CTNNA2-204ENST00000409266 432 ntTSL 3 BASIC2.2□□□□□ -2.06
HLA-DMAP28067 RNU2-43P-201ENST00000410306 190 ntBASIC2.2□□□□□ -2.06
HLA-DMAP28067 RNU2-42P-201ENST00000410697 113 ntBASIC2.2□□□□□ -2.06
HLA-DMAP28067 AL161449.1-201ENST00000414531 1199 ntBASIC2.2□□□□□ -2.06
HLA-DMAP28067 USP9YP20-201ENST00000419224 558 ntBASIC2.2□□□□□ -2.06
HLA-DMAP28067 SEPT2P1-201ENST00000419651 180 ntBASIC2.2□□□□□ -2.06
HLA-DMAP28067 AL357375.1-201ENST00000424274 525 ntTSL 3 BASIC2.2□□□□□ -2.06
HLA-DMAP28067 LINC01351-201ENST00000424735 526 ntTSL 2 BASIC2.2□□□□□ -2.06
HLA-DMAP28067 AC106053.1-201ENST00000431697 368 ntTSL 3 BASIC2.2□□□□□ -2.06
HLA-DMAP28067 TRBV26OR9-2-201ENST00000432077 293 ntBASIC2.2□□□□□ -2.06
HLA-DMAP28067 AL050321.1-201ENST00000432363 400 ntBASIC2.2□□□□□ -2.06
HLA-DMAP28067 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC2.2□□□□□ -2.06
HLA-DMAP28067 AC092393.1-201ENST00000439625 742 ntBASIC2.2□□□□□ -2.06
HLA-DMAP28067 CASP12-207ENST00000447913 819 ntTSL 1 (best) BASIC2.2□□□□□ -2.06
HLA-DMAP28067 AC005297.2-201ENST00000450430 606 ntBASIC2.2□□□□□ -2.06
HLA-DMAP28067 RNU7-26P-201ENST00000458980 63 ntBASIC2.2□□□□□ -2.06
HLA-DMAP28067 AC108733.1-201ENST00000479244 705 ntTSL 3 BASIC2.2□□□□□ -2.06
HLA-DMAP28067 ANKRD36B-207ENST00000497329 649 ntTSL 1 (best) BASIC2.2□□□□□ -2.06
HLA-DMAP28067 PRR16-204ENST00000505123 1298 ntTSL 3 BASIC2.2□□□□□ -2.06
HLA-DMAP28067 AC093752.2-201ENST00000506942 573 ntTSL 5 BASIC2.2□□□□□ -2.06
HLA-DMAP28067 AC109464.2-201ENST00000510242 943 ntBASIC2.2□□□□□ -2.06
HLA-DMAP28067 RNU6-1261P-201ENST00000517194 104 ntBASIC2.2□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 120.3 ms