Protein–RNA interactions for Protein: P20036

HLA-DPA1, HLA class II histocompatibility antigen, DP alpha 1 chain, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1P20036 COX7BP2-201ENST00000437976 242 ntBASIC3.13□□□□□ -1.91
HLA-DPA1P20036 Z82210.1-201ENST00000440037 231 ntBASIC3.13□□□□□ -1.91
HLA-DPA1P20036 RPL7P18-201ENST00000478965 734 ntBASIC3.13□□□□□ -1.91
HLA-DPA1P20036 LEKR1-206ENST00000483177 546 ntTSL 3 BASIC3.13□□□□□ -1.91
HLA-DPA1P20036 RN7SL504P-201ENST00000494496 287 ntBASIC3.13□□□□□ -1.91
HLA-DPA1P20036 RPS27P26-201ENST00000494583 239 ntBASIC3.13□□□□□ -1.91
HLA-DPA1P20036 AC114967.1-201ENST00000504890 259 ntBASIC3.13□□□□□ -1.91
HLA-DPA1P20036 AC093281.2-201ENST00000510153 597 ntBASIC3.13□□□□□ -1.91
HLA-DPA1P20036 AC034159.1-201ENST00000513885 583 ntBASIC3.13□□□□□ -1.91
HLA-DPA1P20036 AC068657.1-201ENST00000520807 306 ntBASIC3.13□□□□□ -1.91
HLA-DPA1P20036 AC087373.1-201ENST00000524920 491 ntBASIC3.13□□□□□ -1.91
HLA-DPA1P20036 AL133271.1-201ENST00000538229 291 ntBASIC3.13□□□□□ -1.91
HLA-DPA1P20036 PPFIA2-AS1-205ENST00000550938 790 ntTSL 3 BASIC3.13□□□□□ -1.91
HLA-DPA1P20036 AC023510.1-201ENST00000555862 490 ntTSL 2 BASIC3.13□□□□□ -1.91
HLA-DPA1P20036 AC020978.4-201ENST00000569088 460 ntTSL 3 BASIC3.13□□□□□ -1.91
HLA-DPA1P20036 AL139344.1-201ENST00000605228 195 ntBASIC3.13□□□□□ -1.91
HLA-DPA1P20036 AC080013.3-201ENST00000606839 578 ntBASIC3.13□□□□□ -1.91
HLA-DPA1P20036 AL133445.2-201ENST00000611191 527 ntBASIC3.13□□□□□ -1.91
HLA-DPA1P20036 UBE2Q2P6-201ENST00000612666 153 ntBASIC3.13□□□□□ -1.91
HLA-DPA1P20036 TFG-209ENST00000615993 1244 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
HLA-DPA1P20036 AC018816.2-201ENST00000621460 353 ntBASIC3.13□□□□□ -1.91
HLA-DPA1P20036 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC3.13□□□□□ -1.91
HLA-DPA1P20036 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC3.12□□□□□ -1.91
HLA-DPA1P20036 AC008669.1-201ENST00000565823 2178 ntBASIC3.12□□□□□ -1.91
HLA-DPA1P20036 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC3.12□□□□□ -1.91
HLA-DPA1P20036 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
HLA-DPA1P20036 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC3.12□□□□□ -1.91
HLA-DPA1P20036 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC3.12□□□□□ -1.91
HLA-DPA1P20036 AP000776.1-201ENST00000530032 1663 ntBASIC3.12□□□□□ -1.91
HLA-DPA1P20036 RNU6-432P-201ENST00000384196 109 ntBASIC3.12□□□□□ -1.91
HLA-DPA1P20036 RNU6-925P-201ENST00000384629 104 ntBASIC3.12□□□□□ -1.91
HLA-DPA1P20036 U3.20-201ENST00000390909 217 ntBASIC3.12□□□□□ -1.91
HLA-DPA1P20036 AC110754.1-201ENST00000399740 601 ntBASIC3.12□□□□□ -1.91
HLA-DPA1P20036 AL590084.2-201ENST00000401481 382 ntBASIC3.12□□□□□ -1.91
HLA-DPA1P20036 SUMO1-205ENST00000409205 534 ntTSL 2 BASIC3.12□□□□□ -1.91
HLA-DPA1P20036 RN7SKP220-201ENST00000410611 288 ntBASIC3.12□□□□□ -1.91
HLA-DPA1P20036 AC062039.1-201ENST00000414394 565 ntTSL 2 BASIC3.12□□□□□ -1.91
HLA-DPA1P20036 AC019064.1-201ENST00000414796 499 ntTSL 2 BASIC3.12□□□□□ -1.91
HLA-DPA1P20036 AC092047.1-201ENST00000424997 240 ntBASIC3.12□□□□□ -1.91
HLA-DPA1P20036 AC091390.3-201ENST00000426478 338 ntBASIC3.12□□□□□ -1.91
HLA-DPA1P20036 AL365496.1-201ENST00000426885 215 ntBASIC3.12□□□□□ -1.91
HLA-DPA1P20036 AC007919.1-201ENST00000429380 217 ntBASIC3.12□□□□□ -1.91
HLA-DPA1P20036 RPL35AP22-201ENST00000436855 335 ntBASIC3.12□□□□□ -1.91
HLA-DPA1P20036 AL359706.1-201ENST00000437748 315 ntTSL 3 BASIC3.12□□□□□ -1.91
HLA-DPA1P20036 BNIP3P2-201ENST00000441221 577 ntBASIC3.12□□□□□ -1.91
HLA-DPA1P20036 Z96811.1-201ENST00000445880 108 ntBASIC3.12□□□□□ -1.91
HLA-DPA1P20036 AC016696.1-201ENST00000446949 318 ntBASIC3.12□□□□□ -1.91
HLA-DPA1P20036 RNU7-23P-201ENST00000459465 62 ntBASIC3.12□□□□□ -1.91
HLA-DPA1P20036 RPS27P29-201ENST00000463110 252 ntBASIC3.12□□□□□ -1.91
HLA-DPA1P20036 C1orf185-202ENST00000467127 747 ntAPPRIS ALT2 TSL 3 BASIC3.12□□□□□ -1.91
HLA-DPA1P20036 UBE2V1P12-201ENST00000503954 474 ntBASIC3.12□□□□□ -1.91
HLA-DPA1P20036 LINC02241-202ENST00000512688 467 ntTSL 3 BASIC3.12□□□□□ -1.91
HLA-DPA1P20036 RNA5SP291-201ENST00000517222 105 ntBASIC3.12□□□□□ -1.91
HLA-DPA1P20036 RN7SKP57-201ENST00000517248 293 ntBASIC3.12□□□□□ -1.91
HLA-DPA1P20036 AC027701.1-201ENST00000520155 823 ntTSL 3 BASIC3.12□□□□□ -1.91
HLA-DPA1P20036 AC245166.1-201ENST00000521012 253 ntBASIC3.12□□□□□ -1.91
HLA-DPA1P20036 MTCO1P47-201ENST00000523889 1271 ntBASIC3.12□□□□□ -1.91
HLA-DPA1P20036 LINCR-0001-203ENST00000524047 545 ntTSL 4 BASIC3.12□□□□□ -1.91
HLA-DPA1P20036 SETP2-201ENST00000553886 926 ntBASIC3.12□□□□□ -1.91
HLA-DPA1P20036 EGLN3-AS1-201ENST00000555922 308 ntTSL 3 BASIC3.12□□□□□ -1.91
HLA-DPA1P20036 TRAV28-201ENST00000557548 323 ntBASIC3.12□□□□□ -1.91
HLA-DPA1P20036 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC3.12□□□□□ -1.91
HLA-DPA1P20036 AC010620.2-201ENST00000600135 313 ntBASIC3.12□□□□□ -1.91
HLA-DPA1P20036 AL596327.1-201ENST00000603629 213 ntBASIC3.12□□□□□ -1.91
HLA-DPA1P20036 AL357094.1-201ENST00000603845 844 ntBASIC3.12□□□□□ -1.91
HLA-DPA1P20036 YPEL5P2-201ENST00000605553 359 ntBASIC3.12□□□□□ -1.91
HLA-DPA1P20036 ADARB1-213ENST00000611195 159 ntTSL 5 BASIC3.12□□□□□ -1.91
HLA-DPA1P20036 C8orf59-208ENST00000612809 475 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
HLA-DPA1P20036 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
HLA-DPA1P20036 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
HLA-DPA1P20036 AC093274.1-201ENST00000503488 5454 ntTSL 5 BASIC3.11□□□□□ -1.91
HLA-DPA1P20036 SPA17-201ENST00000227135 853 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
HLA-DPA1P20036 RNU6-853P-201ENST00000364306 107 ntBASIC3.11□□□□□ -1.91
HLA-DPA1P20036 RNA5-8SP4-201ENST00000365096 150 ntBASIC3.11□□□□□ -1.91
HLA-DPA1P20036 SNORA9-201ENST00000384215 133 ntBASIC3.11□□□□□ -1.91
HLA-DPA1P20036 SNORA46-201ENST00000384762 135 ntBASIC3.11□□□□□ -1.91
HLA-DPA1P20036 MIR483-201ENST00000385070 76 ntBASIC3.11□□□□□ -1.91
HLA-DPA1P20036 RNU6-1242P-201ENST00000391052 103 ntBASIC3.11□□□□□ -1.91
HLA-DPA1P20036 TXNP7-201ENST00000406296 293 ntBASIC3.11□□□□□ -1.91
HLA-DPA1P20036 NT5C3A-205ENST00000409467 1032 ntAPPRIS ALT1 TSL 5 BASIC3.11□□□□□ -1.91
HLA-DPA1P20036 RN7SKP140-201ENST00000411196 284 ntBASIC3.11□□□□□ -1.91
HLA-DPA1P20036 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC3.11□□□□□ -1.91
HLA-DPA1P20036 AP000550.2-201ENST00000417463 774 ntTSL 5 BASIC3.11□□□□□ -1.91
HLA-DPA1P20036 AC083875.1-201ENST00000419509 405 ntBASIC3.11□□□□□ -1.91
HLA-DPA1P20036 RPL7P37-201ENST00000425095 738 ntBASIC3.11□□□□□ -1.91
HLA-DPA1P20036 AC009414.1-201ENST00000427200 443 ntBASIC3.11□□□□□ -1.91
HLA-DPA1P20036 AC004160.1-205ENST00000428967 577 ntTSL 4 BASIC3.11□□□□□ -1.91
HLA-DPA1P20036 AP000552.3-201ENST00000434730 775 ntTSL 5 BASIC3.11□□□□□ -1.91
HLA-DPA1P20036 SETP8-201ENST00000435341 628 ntBASIC3.11□□□□□ -1.91
HLA-DPA1P20036 AL049734.2-201ENST00000441066 616 ntBASIC3.11□□□□□ -1.91
HLA-DPA1P20036 PIGFP3-201ENST00000441918 722 ntBASIC3.11□□□□□ -1.91
HLA-DPA1P20036 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC3.11□□□□□ -1.91
HLA-DPA1P20036 AL162389.1-201ENST00000449233 177 ntBASIC3.11□□□□□ -1.91
HLA-DPA1P20036 AC098820.1-201ENST00000453157 512 ntTSL 2 BASIC3.11□□□□□ -1.91
HLA-DPA1P20036 AP1S2P1-201ENST00000457344 379 ntBASIC3.11□□□□□ -1.91
HLA-DPA1P20036 AC135721.1-201ENST00000497954 479 ntBASIC3.11□□□□□ -1.91
HLA-DPA1P20036 AC119751.4-201ENST00000507498 357 ntBASIC3.11□□□□□ -1.91
HLA-DPA1P20036 CSN1S1-204ENST00000507772 895 ntAPPRIS ALT2 TSL 5 BASIC3.11□□□□□ -1.91
HLA-DPA1P20036 RNU4ATAC15P-201ENST00000516415 126 ntBASIC3.11□□□□□ -1.91
HLA-DPA1P20036 NRON-201ENST00000517270 370 ntBASIC3.11□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 89.1 ms