Protein–RNA interactions for Protein: P09493

TPM1, Tropomyosin alpha-1 chain, humanhuman

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1P09493 ZFAND6P1-201ENST00000434138 605 ntBASIC2.57□□□□□ -2
TPM1P09493 NFIA-AS1-201ENST00000442027 384 ntTSL 2 BASIC2.57□□□□□ -2
TPM1P09493 LINC00529-201ENST00000443854 241 ntTSL 2 BASIC2.57□□□□□ -2
TPM1P09493 BMI1P1-201ENST00000445879 941 ntBASIC2.57□□□□□ -2
TPM1P09493 LINC01828-202ENST00000450294 955 ntTSL 5 BASIC2.57□□□□□ -2
TPM1P09493 AC092757.1-201ENST00000467293 467 ntBASIC2.57□□□□□ -2
TPM1P09493 AC078857.1-201ENST00000469870 667 ntBASIC2.57□□□□□ -2
TPM1P09493 Z84488.1-201ENST00000476099 530 ntTSL 2 BASIC2.57□□□□□ -2
TPM1P09493 AC025181.1-201ENST00000477507 416 ntBASIC2.57□□□□□ -2
TPM1P09493 MRPL42P6-201ENST00000486397 371 ntBASIC2.57□□□□□ -2
TPM1P09493 AC090255.1-201ENST00000495779 349 ntBASIC2.57□□□□□ -2
TPM1P09493 AC080014.1-201ENST00000496877 1201 ntBASIC2.57□□□□□ -2
TPM1P09493 LINC02469-201ENST00000506460 741 ntTSL 3 BASIC2.57□□□□□ -2
TPM1P09493 AC012625.1-201ENST00000515153 625 ntTSL 5 BASIC2.57□□□□□ -2
TPM1P09493 RNA5SP24-201ENST00000516478 95 ntBASIC2.57□□□□□ -2
TPM1P09493 AC022390.1-201ENST00000517854 434 ntTSL 3 BASIC2.57□□□□□ -2
TPM1P09493 AC025524.1-201ENST00000518489 606 ntTSL 4 BASIC2.57□□□□□ -2
TPM1P09493 AC022784.5-201ENST00000522241 437 ntBASIC2.57□□□□□ -2
TPM1P09493 MTCYBP27-201ENST00000555160 670 ntBASIC2.57□□□□□ -2
TPM1P09493 LARP7P2-201ENST00000575306 125 ntBASIC2.57□□□□□ -2
TPM1P09493 MYL12B-204ENST00000584539 1064 ntAPPRIS P1 TSL 3 BASIC2.57□□□□□ -2
TPM1P09493 RN7SL622P-201ENST00000585292 275 ntBASIC2.57□□□□□ -2
TPM1P09493 ATP1B3P1-201ENST00000605365 821 ntBASIC2.57□□□□□ -2
TPM1P09493 LINC01440-205ENST00000608080 737 ntTSL 3 BASIC2.57□□□□□ -2
TPM1P09493 MIR6840-201ENST00000611937 71 ntBASIC2.57□□□□□ -2
TPM1P09493 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC2.57□□□□□ -2
TPM1P09493 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC2.57□□□□□ -2
TPM1P09493 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
TPM1P09493 AC108750.1-201ENST00000637986 2706 ntAPPRIS P1 TSL 4 BASIC2.56□□□□□ -2
TPM1P09493 AC069528.2-201ENST00000624849 1991 ntBASIC2.56□□□□□ -2
TPM1P09493 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
TPM1P09493 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC2.56□□□□□ -2
TPM1P09493 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
TPM1P09493 AL365356.1-201ENST00000411512 736 ntTSL 3 BASIC2.56□□□□□ -2
TPM1P09493 AC092634.6-201ENST00000418558 192 ntBASIC2.56□□□□□ -2
TPM1P09493 SFR1P2-201ENST00000421841 730 ntBASIC2.56□□□□□ -2
TPM1P09493 LINC01799-202ENST00000426260 625 ntTSL 3 BASIC2.56□□□□□ -2
TPM1P09493 AC091390.3-201ENST00000426478 338 ntBASIC2.56□□□□□ -2
TPM1P09493 AP001599.1-201ENST00000426771 361 ntTSL 3 BASIC2.56□□□□□ -2
TPM1P09493 AL022396.1-201ENST00000427011 386 ntTSL 3 BASIC2.56□□□□□ -2
TPM1P09493 AL096678.1-201ENST00000438877 472 ntTSL 3 BASIC2.56□□□□□ -2
TPM1P09493 AL451164.2-201ENST00000445932 597 ntTSL 2 BASIC2.56□□□□□ -2
TPM1P09493 AL096803.2-201ENST00000450032 677 ntBASIC2.56□□□□□ -2
TPM1P09493 SNRPG-206ENST00000454893 527 ntTSL 3 BASIC2.56□□□□□ -2
TPM1P09493 AGBL4-IT1-201ENST00000457061 514 ntTSL 3 BASIC2.56□□□□□ -2
TPM1P09493 HSPE1P6-201ENST00000479457 291 ntBASIC2.56□□□□□ -2
TPM1P09493 AC020703.1-201ENST00000505051 521 ntTSL 3 BASIC2.56□□□□□ -2
TPM1P09493 AP000889.2-201ENST00000532684 490 ntBASIC2.56□□□□□ -2
TPM1P09493 AC090502.2-201ENST00000549267 280 ntBASIC2.56□□□□□ -2
TPM1P09493 AP005059.2-201ENST00000577527 578 ntTSL 3 BASIC2.56□□□□□ -2
TPM1P09493 AC116003.2-201ENST00000579278 748 ntTSL 2 BASIC2.56□□□□□ -2
TPM1P09493 AL451007.1-201ENST00000595491 289 ntBASIC2.56□□□□□ -2
TPM1P09493 AC080188.3-201ENST00000624842 748 ntBASIC2.56□□□□□ -2
TPM1P09493 CU459211.1-201ENST00000635667 749 ntBASIC2.56□□□□□ -2
TPM1P09493 AC009975.2-201ENST00000635306 1429 ntTSL 5 BASIC2.56□□□□□ -2
TPM1P09493 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
TPM1P09493 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC2.55□□□□□ -2
TPM1P09493 CCT4P2-201ENST00000233836 1548 ntBASIC2.55□□□□□ -2
TPM1P09493 RNU6-657P-201ENST00000383904 107 ntBASIC2.55□□□□□ -2
TPM1P09493 MIR34A-201ENST00000385130 110 ntBASIC2.55□□□□□ -2
TPM1P09493 AL133264.1-201ENST00000407157 562 ntBASIC2.55□□□□□ -2
TPM1P09493 AL158050.1-201ENST00000416077 457 ntBASIC2.55□□□□□ -2
TPM1P09493 AC019097.1-201ENST00000424783 735 ntBASIC2.55□□□□□ -2
TPM1P09493 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC2.55□□□□□ -2
TPM1P09493 AC000041.1-201ENST00000439655 175 ntBASIC2.55□□□□□ -2
TPM1P09493 AL592182.1-201ENST00000440897 250 ntTSL 5 BASIC2.55□□□□□ -2
TPM1P09493 MYCBP2-AS1-202ENST00000448470 333 ntTSL 3 BASIC2.55□□□□□ -2
TPM1P09493 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC2.55□□□□□ -2
TPM1P09493 USP9YP34-201ENST00000453983 808 ntBASIC2.55□□□□□ -2
TPM1P09493 RNU7-140P-201ENST00000459546 60 ntBASIC2.55□□□□□ -2
TPM1P09493 IGSF11-AS1-201ENST00000477009 1604 ntTSL 2 BASIC2.55□□□□□ -2
TPM1P09493 AC079804.2-201ENST00000490376 200 ntBASIC2.55□□□□□ -2
TPM1P09493 SUMO2P6-201ENST00000505273 288 ntBASIC2.55□□□□□ -2
TPM1P09493 LINC02465-201ENST00000507099 532 ntTSL 4 BASIC2.55□□□□□ -2
TPM1P09493 AC026436.1-201ENST00000510537 270 ntBASIC2.55□□□□□ -2
TPM1P09493 KLRF1-203ENST00000537723 598 ntTSL 1 (best) BASIC2.55□□□□□ -2
TPM1P09493 AKIRIN1P1-201ENST00000547384 544 ntBASIC2.55□□□□□ -2
TPM1P09493 AC007906.1-201ENST00000568648 510 ntTSL 5 BASIC2.55□□□□□ -2
TPM1P09493 AC022336.2-201ENST00000568966 2538 ntBASIC2.55□□□□□ -2
TPM1P09493 AC135507.1-201ENST00000607214 561 ntBASIC2.55□□□□□ -2
TPM1P09493 DUXAP10-204ENST00000612052 616 ntBASIC2.55□□□□□ -2
TPM1P09493 AL442067.2-201ENST00000614033 363 ntBASIC2.55□□□□□ -2
TPM1P09493 AC245884.12-201ENST00000615364 59 ntBASIC2.55□□□□□ -2
TPM1P09493 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
TPM1P09493 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC2.55□□□□□ -2
TPM1P09493 AC016717.2-201ENST00000609089 5141 ntBASIC2.54□□□□□ -2
TPM1P09493 EVI2B-202ENST00000577894 1597 ntAPPRIS P1 TSL 2 BASIC2.54□□□□□ -2
TPM1P09493 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
TPM1P09493 RNU6-76P-201ENST00000384060 104 ntBASIC2.54□□□□□ -2
TPM1P09493 MIR524-201ENST00000385242 87 ntBASIC2.54□□□□□ -2
TPM1P09493 RNU2-28P-201ENST00000410457 189 ntBASIC2.54□□□□□ -2
TPM1P09493 RNU2-52P-201ENST00000410680 190 ntBASIC2.54□□□□□ -2
TPM1P09493 RNU4-27P-201ENST00000410889 139 ntBASIC2.54□□□□□ -2
TPM1P09493 RPS7P9-201ENST00000414704 586 ntBASIC2.54□□□□□ -2
TPM1P09493 AL451127.1-201ENST00000422909 624 ntTSL 3 BASIC2.54□□□□□ -2
TPM1P09493 AC063976.3-201ENST00000426849 329 ntBASIC2.54□□□□□ -2
TPM1P09493 AC092017.2-201ENST00000427600 362 ntBASIC2.54□□□□□ -2
TPM1P09493 LINC00113-203ENST00000442550 572 ntTSL 3 BASIC2.54□□□□□ -2
TPM1P09493 DDX3P2-201ENST00000446138 111 ntBASIC2.54□□□□□ -2
TPM1P09493 IFNA11P-201ENST00000446352 526 ntBASIC2.54□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 102.3 ms