Protein–RNA interactions for Protein: P09016

HOXD4, Homeobox protein Hox-D4, humanhuman

Predicted RBP Predictions only

Length 255 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD4P09016 AL831737.1-201ENST00000441288 271 ntBASIC3.05□□□□□ -1.92
HOXD4P09016 MTND5P14-201ENST00000441481 1267 ntBASIC3.05□□□□□ -1.92
HOXD4P09016 AL121957.1-201ENST00000441532 338 ntTSL 2 BASIC3.05□□□□□ -1.92
HOXD4P09016 AC018359.1-201ENST00000442567 574 ntTSL 4 BASIC3.05□□□□□ -1.92
HOXD4P09016 COX6CP2-201ENST00000444980 225 ntBASIC3.05□□□□□ -1.92
HOXD4P09016 AL357552.1-201ENST00000445254 415 ntBASIC3.05□□□□□ -1.92
HOXD4P09016 GAPDHP27-201ENST00000447427 1020 ntBASIC3.05□□□□□ -1.92
HOXD4P09016 MTCO1P27-201ENST00000448269 226 ntBASIC3.05□□□□□ -1.92
HOXD4P09016 ARPC3P5-201ENST00000448802 534 ntBASIC3.05□□□□□ -1.92
HOXD4P09016 AL163192.1-201ENST00000448858 708 ntTSL 5 BASIC3.05□□□□□ -1.92
HOXD4P09016 RPL31P50-201ENST00000471002 296 ntBASIC3.05□□□□□ -1.92
HOXD4P09016 AC116337.2-201ENST00000477662 156 ntBASIC3.05□□□□□ -1.92
HOXD4P09016 RPS4XP13-201ENST00000483219 789 ntBASIC3.05□□□□□ -1.92
HOXD4P09016 AC006483.1-201ENST00000487308 313 ntBASIC3.05□□□□□ -1.92
HOXD4P09016 RPL23AP55-201ENST00000498163 452 ntBASIC3.05□□□□□ -1.92
HOXD4P09016 AC093767.1-201ENST00000504523 156 ntBASIC3.05□□□□□ -1.92
HOXD4P09016 AC093297.2-205ENST00000508123 572 ntTSL 3 BASIC3.05□□□□□ -1.92
HOXD4P09016 AC093809.1-201ENST00000509155 340 ntBASIC3.05□□□□□ -1.92
HOXD4P09016 LINC02113-201ENST00000510302 336 ntTSL 3 BASIC3.05□□□□□ -1.92
HOXD4P09016 AC093766.1-202ENST00000513400 718 ntTSL 3 BASIC3.05□□□□□ -1.92
HOXD4P09016 RN7SKP244-201ENST00000516513 307 ntBASIC3.05□□□□□ -1.92
HOXD4P09016 SNORA70.19-201ENST00000516717 90 ntBASIC3.05□□□□□ -1.92
HOXD4P09016 AC090136.1-201ENST00000520009 240 ntBASIC3.05□□□□□ -1.92
HOXD4P09016 HSPA8P13-201ENST00000523715 472 ntBASIC3.05□□□□□ -1.92
HOXD4P09016 KLRF1-203ENST00000537723 598 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
HOXD4P09016 AP002993.1-201ENST00000538624 210 ntTSL 5 BASIC3.05□□□□□ -1.92
HOXD4P09016 AL135746.1-201ENST00000554205 547 ntTSL 3 BASIC3.05□□□□□ -1.92
HOXD4P09016 PCMTD1P2-201ENST00000565017 355 ntBASIC3.05□□□□□ -1.92
HOXD4P09016 MIR5680-201ENST00000577577 84 ntBASIC3.05□□□□□ -1.92
HOXD4P09016 MIR4276-201ENST00000584832 70 ntBASIC3.05□□□□□ -1.92
HOXD4P09016 AC024563.1-202ENST00000597533 419 ntTSL 3 BASIC3.05□□□□□ -1.92
HOXD4P09016 CKS1BP3-201ENST00000600888 237 ntBASIC3.05□□□□□ -1.92
HOXD4P09016 AL606834.2-201ENST00000602954 668 ntBASIC3.05□□□□□ -1.92
HOXD4P09016 AC073657.2-201ENST00000605661 303 ntBASIC3.05□□□□□ -1.92
HOXD4P09016 AC239868.4-201ENST00000608318 671 ntBASIC3.05□□□□□ -1.92
HOXD4P09016 AC103710.4-201ENST00000609301 899 ntBASIC3.05□□□□□ -1.92
HOXD4P09016 ATXN3L-202ENST00000622204 837 ntTSL 5 BASIC3.05□□□□□ -1.92
HOXD4P09016 AC090582.1-201ENST00000636321 199 ntBASIC3.05□□□□□ -1.92
HOXD4P09016 ASPN-201ENST00000375543 2237 ntTSL 2 BASIC3.05□□□□□ -1.92
HOXD4P09016 LRRC39-204ENST00000620882 1951 ntTSL 5 BASIC3.05□□□□□ -1.92
HOXD4P09016 SERPINA7-201ENST00000327674 2642 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
HOXD4P09016 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC3.04□□□□□ -1.92
HOXD4P09016 LMNTD1-204ENST00000458174 1677 ntAPPRIS ALT2 TSL 2 BASIC3.04□□□□□ -1.92
HOXD4P09016 ANKRD62P1-201ENST00000434304 1623 ntBASIC3.04□□□□□ -1.92
HOXD4P09016 AC007656.2-201ENST00000624902 4547 ntBASIC3.04□□□□□ -1.92
HOXD4P09016 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
HOXD4P09016 AC092104.1-201ENST00000497346 1441 ntBASIC3.04□□□□□ -1.92
HOXD4P09016 GDI2P1-201ENST00000429312 1336 ntBASIC3.04□□□□□ -1.92
HOXD4P09016 ATF2-221ENST00000538946 1325 ntTSL 5 BASIC3.04□□□□□ -1.92
HOXD4P09016 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
HOXD4P09016 SNORD56.3-201ENST00000363507 71 ntBASIC3.04□□□□□ -1.92
HOXD4P09016 RNU6-263P-201ENST00000363811 107 ntBASIC3.04□□□□□ -1.92
HOXD4P09016 Y_RNA.553-201ENST00000384670 102 ntBASIC3.04□□□□□ -1.92
HOXD4P09016 RNU6-821P-201ENST00000390995 107 ntBASIC3.04□□□□□ -1.92
HOXD4P09016 UBA52P6-201ENST00000399822 382 ntBASIC3.04□□□□□ -1.92
HOXD4P09016 AL122016.1-201ENST00000403365 367 ntBASIC3.04□□□□□ -1.92
HOXD4P09016 AC013286.1-201ENST00000412137 381 ntTSL 5 BASIC3.04□□□□□ -1.92
HOXD4P09016 BX323014.1-201ENST00000412876 237 ntBASIC3.04□□□□□ -1.92
HOXD4P09016 AC004870.3-202ENST00000412996 432 ntTSL 3 BASIC3.04□□□□□ -1.92
HOXD4P09016 FGF12-AS1-201ENST00000414920 580 ntTSL 4 BASIC3.04□□□□□ -1.92
HOXD4P09016 AC104777.3-201ENST00000416350 545 ntTSL 3 BASIC3.04□□□□□ -1.92
HOXD4P09016 AL023581.1-201ENST00000423500 455 ntTSL 2 BASIC3.04□□□□□ -1.92
HOXD4P09016 AC003084.1-201ENST00000427030 435 ntTSL 5 BASIC3.04□□□□□ -1.92
HOXD4P09016 LINC00392-201ENST00000430033 557 ntTSL 3 BASIC3.04□□□□□ -1.92
HOXD4P09016 OFD1P13Y-201ENST00000431179 1232 ntBASIC3.04□□□□□ -1.92
HOXD4P09016 AC091862.1-201ENST00000438016 1100 ntBASIC3.04□□□□□ -1.92
HOXD4P09016 SNRPEP7-201ENST00000438350 220 ntBASIC3.04□□□□□ -1.92
HOXD4P09016 LSM1P1-201ENST00000438629 273 ntBASIC3.04□□□□□ -1.92
HOXD4P09016 AL359636.3-201ENST00000439471 301 ntTSL 2 BASIC3.04□□□□□ -1.92
HOXD4P09016 LINC01317-202ENST00000442026 677 ntTSL 3 BASIC3.04□□□□□ -1.92
HOXD4P09016 MTCO1P19-201ENST00000443487 500 ntBASIC3.04□□□□□ -1.92
HOXD4P09016 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC3.04□□□□□ -1.92
HOXD4P09016 AC099342.1-201ENST00000446399 1124 ntTSL 3 BASIC3.04□□□□□ -1.92
HOXD4P09016 AC074327.1-201ENST00000448017 540 ntTSL 2 BASIC3.04□□□□□ -1.92
HOXD4P09016 LINC01474-202ENST00000449235 628 ntTSL 3 BASIC3.04□□□□□ -1.92
HOXD4P09016 AC005297.2-201ENST00000450430 606 ntBASIC3.04□□□□□ -1.92
HOXD4P09016 BX322784.1-201ENST00000455793 1077 ntBASIC3.04□□□□□ -1.92
HOXD4P09016 SNRPGP9-201ENST00000456025 225 ntBASIC3.04□□□□□ -1.92
HOXD4P09016 AL133351.1-201ENST00000456189 417 ntTSL 2 BASIC3.04□□□□□ -1.92
HOXD4P09016 RPL21P13-201ENST00000488305 481 ntBASIC3.04□□□□□ -1.92
HOXD4P09016 MTND4P2-201ENST00000507767 1203 ntBASIC3.04□□□□□ -1.92
HOXD4P09016 MTCO3P7-201ENST00000510008 774 ntBASIC3.04□□□□□ -1.92
HOXD4P09016 MTND5P4-201ENST00000514978 288 ntBASIC3.04□□□□□ -1.92
HOXD4P09016 AC022447.1-201ENST00000515358 464 ntBASIC3.04□□□□□ -1.92
HOXD4P09016 RNU6-1073P-201ENST00000517182 106 ntBASIC3.04□□□□□ -1.92
HOXD4P09016 AC013828.2-201ENST00000532487 235 ntBASIC3.04□□□□□ -1.92
HOXD4P09016 AC026333.2-201ENST00000542164 106 ntBASIC3.04□□□□□ -1.92
HOXD4P09016 AC090049.1-201ENST00000551075 1011 ntTSL 3 BASIC3.04□□□□□ -1.92
HOXD4P09016 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC3.04□□□□□ -1.92
HOXD4P09016 AC023510.1-201ENST00000555862 490 ntTSL 2 BASIC3.04□□□□□ -1.92
HOXD4P09016 AF001550.1-201ENST00000572747 573 ntTSL 4 BASIC3.04□□□□□ -1.92
HOXD4P09016 GALNT1-205ENST00000591081 1120 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
HOXD4P09016 AL157786.1-204ENST00000594870 506 ntTSL 3 BASIC3.04□□□□□ -1.92
HOXD4P09016 AC012360.2-201ENST00000609349 391 ntBASIC3.04□□□□□ -1.92
HOXD4P09016 RDM1-219ENST00000615378 542 ntTSL 3 BASIC3.04□□□□□ -1.92
HOXD4P09016 AL356321.1-201ENST00000621360 228 ntBASIC3.04□□□□□ -1.92
HOXD4P09016 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC3.04□□□□□ -1.92
HOXD4P09016 C1D-201ENST00000355848 2233 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
HOXD4P09016 AC017071.1-201ENST00000564407 2204 ntBASIC3.04□□□□□ -1.92
HOXD4P09016 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC3.04□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 119.1 ms