Protein–RNA interactions for Protein: P06340

HLA-DOA, HLA class II histocompatibility antigen, DO alpha chain, humanhuman

Predictions only

Length 250 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOAP06340 PDCL2P1-201ENST00000419302 352 ntBASIC4.38□□□□□ -1.71
HLA-DOAP06340 DIAPH3-AS1-201ENST00000422052 428 ntTSL 3 BASIC4.38□□□□□ -1.71
HLA-DOAP06340 AL590378.1-201ENST00000426818 303 ntTSL 3 BASIC4.38□□□□□ -1.71
HLA-DOAP06340 BNIP3P2-201ENST00000441221 577 ntBASIC4.38□□□□□ -1.71
HLA-DOAP06340 AC007677.1-201ENST00000445757 515 ntBASIC4.38□□□□□ -1.71
HLA-DOAP06340 AC022795.1-201ENST00000473808 480 ntBASIC4.38□□□□□ -1.71
HLA-DOAP06340 HMGN1P10-201ENST00000474557 553 ntBASIC4.38□□□□□ -1.71
HLA-DOAP06340 AC104563.1-201ENST00000476147 376 ntBASIC4.38□□□□□ -1.71
HLA-DOAP06340 Y_RNA.675-201ENST00000516389 149 ntBASIC4.38□□□□□ -1.71
HLA-DOAP06340 AC022616.3-201ENST00000523940 148 ntBASIC4.38□□□□□ -1.71
HLA-DOAP06340 AC093027.1-201ENST00000546698 429 ntBASIC4.38□□□□□ -1.71
HLA-DOAP06340 AC009292.2-201ENST00000558889 291 ntTSL 5 BASIC4.38□□□□□ -1.71
HLA-DOAP06340 CERS6-AS1-209ENST00000609766 642 ntTSL 5 BASIC4.38□□□□□ -1.71
HLA-DOAP06340 AC006504.8-201ENST00000621046 635 ntBASIC4.38□□□□□ -1.71
HLA-DOAP06340 AL596275.2-204ENST00000641628 552 ntBASIC4.38□□□□□ -1.71
HLA-DOAP06340 AL596275.2-206ENST00000641957 626 ntBASIC4.38□□□□□ -1.71
HLA-DOAP06340 TBC1D31-210ENST00000521676 3256 ntTSL 5 BASIC4.38□□□□□ -1.71
HLA-DOAP06340 C9orf153-204ENST00000613665 1738 ntAPPRIS P2 TSL 2 BASIC4.38□□□□□ -1.71
HLA-DOAP06340 ETV1-203ENST00000403527 3363 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
HLA-DOAP06340 MTCO1P12-201ENST00000414273 1543 ntBASIC4.37□□□□□ -1.71
HLA-DOAP06340 TDRD1-202ENST00000369280 4062 ntAPPRIS ALT2 TSL 5 BASIC4.37□□□□□ -1.71
HLA-DOAP06340 TATDN1-201ENST00000276692 1018 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
HLA-DOAP06340 PLET1-201ENST00000338832 1215 ntAPPRIS P1 TSL 5 BASIC4.37□□□□□ -1.71
HLA-DOAP06340 RNU6-169P-201ENST00000365336 107 ntBASIC4.37□□□□□ -1.71
HLA-DOAP06340 SNORA20.2-201ENST00000383922 131 ntBASIC4.37□□□□□ -1.71
HLA-DOAP06340 RNU6-116P-201ENST00000384042 109 ntBASIC4.37□□□□□ -1.71
HLA-DOAP06340 RNU6-1158P-201ENST00000391167 107 ntBASIC4.37□□□□□ -1.71
HLA-DOAP06340 AL356421.1-201ENST00000403255 413 ntBASIC4.37□□□□□ -1.71
HLA-DOAP06340 AC004987.3-201ENST00000413879 771 ntBASIC4.37□□□□□ -1.71
HLA-DOAP06340 GRM7-AS1-201ENST00000420230 430 ntTSL 3 BASIC4.37□□□□□ -1.71
HLA-DOAP06340 AC004870.4-201ENST00000424359 360 ntTSL 2 BASIC4.37□□□□□ -1.71
HLA-DOAP06340 AL513185.2-201ENST00000425543 193 ntBASIC4.37□□□□□ -1.71
HLA-DOAP06340 LANCL1-AS1-203ENST00000433296 864 ntTSL 2 BASIC4.37□□□□□ -1.71
HLA-DOAP06340 AC127537.2-201ENST00000439258 465 ntBASIC4.37□□□□□ -1.71
HLA-DOAP06340 AC007953.1-201ENST00000450500 560 ntTSL 4 BASIC4.37□□□□□ -1.71
HLA-DOAP06340 HMGB1P15-201ENST00000453854 435 ntBASIC4.37□□□□□ -1.71
HLA-DOAP06340 AC010683.1-201ENST00000473673 378 ntBASIC4.37□□□□□ -1.71
HLA-DOAP06340 AC034222.1-201ENST00000494052 532 ntBASIC4.37□□□□□ -1.71
HLA-DOAP06340 TNFAIP8-205ENST00000504642 711 ntTSL 3 BASIC4.37□□□□□ -1.71
HLA-DOAP06340 AC112198.3-201ENST00000505950 441 ntTSL 3 BASIC4.37□□□□□ -1.71
HLA-DOAP06340 SCARNA15.1-201ENST00000516384 125 ntBASIC4.37□□□□□ -1.71
HLA-DOAP06340 AC084768.1-201ENST00000518926 923 ntTSL 3 BASIC4.37□□□□□ -1.71
HLA-DOAP06340 AC104232.2-201ENST00000519680 769 ntTSL 5 BASIC4.37□□□□□ -1.71
HLA-DOAP06340 RANP9-201ENST00000519957 271 ntBASIC4.37□□□□□ -1.71
HLA-DOAP06340 LYRM2-203ENST00000520318 677 ntTSL 2 BASIC4.37□□□□□ -1.71
HLA-DOAP06340 SUMO2P20-201ENST00000520803 283 ntBASIC4.37□□□□□ -1.71
HLA-DOAP06340 AC079098.1-202ENST00000523150 573 ntTSL 5 BASIC4.37□□□□□ -1.71
HLA-DOAP06340 DEUP1-203ENST00000527307 767 ntTSL 3 BASIC4.37□□□□□ -1.71
HLA-DOAP06340 AC107918.3-201ENST00000533272 382 ntBASIC4.37□□□□□ -1.71
HLA-DOAP06340 HOMER1-205ENST00000535690 642 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
HLA-DOAP06340 LINC00944-201ENST00000536517 421 ntTSL 2 BASIC4.37□□□□□ -1.71
HLA-DOAP06340 AC084819.1-201ENST00000537293 424 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
HLA-DOAP06340 LINC02305-201ENST00000554142 476 ntTSL 3 BASIC4.37□□□□□ -1.71
HLA-DOAP06340 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC4.37□□□□□ -1.71
HLA-DOAP06340 MIR3922-201ENST00000585192 84 ntBASIC4.37□□□□□ -1.71
HLA-DOAP06340 NRBF2P5-201ENST00000603087 788 ntBASIC4.37□□□□□ -1.71
HLA-DOAP06340 AL445584.2-201ENST00000614030 616 ntTSL 5 BASIC4.37□□□□□ -1.71
HLA-DOAP06340 AC009233.1-201ENST00000616477 371 ntBASIC4.37□□□□□ -1.71
HLA-DOAP06340 CT45A5-202ENST00000617203 726 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
HLA-DOAP06340 AC243312.2-201ENST00000623340 601 ntBASIC4.37□□□□□ -1.71
HLA-DOAP06340 OR5T1-201ENST00000641368 1118 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
HLA-DOAP06340 CCNH-206ENST00000508855 2391 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
HLA-DOAP06340 STON1-GTF2A1L-201ENST00000394751 3534 ntTSL 2 BASIC4.37□□□□□ -1.71
HLA-DOAP06340 LTN1-207ENST00000614971 7756 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
HLA-DOAP06340 SEMA3D-201ENST00000284136 6265 ntAPPRIS P1 TSL 5 BASIC4.37□□□□□ -1.71
HLA-DOAP06340 DYNC2H1-201ENST00000334267 2984 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
HLA-DOAP06340 CNGA1-201ENST00000358519 2627 ntAPPRIS P3 TSL 1 (best) BASIC4.36□□□□□ -1.71
HLA-DOAP06340 AC011155.1-201ENST00000316512 456 ntBASIC4.36□□□□□ -1.71
HLA-DOAP06340 RNA5SP387-201ENST00000364226 106 ntBASIC4.36□□□□□ -1.71
HLA-DOAP06340 RNU6-1322P-201ENST00000364309 107 ntBASIC4.36□□□□□ -1.71
HLA-DOAP06340 FGFR1OP2P1-201ENST00000395943 500 ntBASIC4.36□□□□□ -1.71
HLA-DOAP06340 TANK-204ENST00000403609 555 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
HLA-DOAP06340 AL591416.1-201ENST00000404015 867 ntBASIC4.36□□□□□ -1.71
HLA-DOAP06340 AC009505.1-201ENST00000413151 424 ntTSL 2 BASIC4.36□□□□□ -1.71
HLA-DOAP06340 AC023051.1-201ENST00000414098 876 ntTSL 5 BASIC4.36□□□□□ -1.71
HLA-DOAP06340 AC006548.1-201ENST00000427470 102 ntBASIC4.36□□□□□ -1.71
HLA-DOAP06340 AL512658.1-202ENST00000433486 400 ntTSL 3 BASIC4.36□□□□□ -1.71
HLA-DOAP06340 TAAR7P-201ENST00000436141 242 ntBASIC4.36□□□□□ -1.71
HLA-DOAP06340 CYCSP43-201ENST00000438233 310 ntBASIC4.36□□□□□ -1.71
HLA-DOAP06340 AL138799.3-201ENST00000438968 350 ntBASIC4.36□□□□□ -1.71
HLA-DOAP06340 AL049734.2-201ENST00000441066 616 ntBASIC4.36□□□□□ -1.71
HLA-DOAP06340 RPL21P23-201ENST00000446654 460 ntBASIC4.36□□□□□ -1.71
HLA-DOAP06340 MYCBP2-AS1-203ENST00000450627 349 ntTSL 3 BASIC4.36□□□□□ -1.71
HLA-DOAP06340 SNRPGP6-201ENST00000451124 220 ntBASIC4.36□□□□□ -1.71
HLA-DOAP06340 AC087385.1-201ENST00000475062 312 ntBASIC4.36□□□□□ -1.71
HLA-DOAP06340 RN7SL293P-201ENST00000481765 281 ntBASIC4.36□□□□□ -1.71
HLA-DOAP06340 AC139783.2-201ENST00000504847 1145 ntBASIC4.36□□□□□ -1.71
HLA-DOAP06340 RNA5SP401-201ENST00000515920 127 ntBASIC4.36□□□□□ -1.71
HLA-DOAP06340 RNA5SP154-201ENST00000516193 111 ntBASIC4.36□□□□□ -1.71
HLA-DOAP06340 HMGB1P19-201ENST00000517578 577 ntBASIC4.36□□□□□ -1.71
HLA-DOAP06340 AC113192.5-201ENST00000528779 486 ntTSL 2 BASIC4.36□□□□□ -1.71
HLA-DOAP06340 OR5B19P-201ENST00000531766 928 ntBASIC4.36□□□□□ -1.71
HLA-DOAP06340 OR5B10P-201ENST00000532869 642 ntBASIC4.36□□□□□ -1.71
HLA-DOAP06340 IGKV2OR2-8-201ENST00000558710 300 ntBASIC4.36□□□□□ -1.71
HLA-DOAP06340 LINC01290-201ENST00000566787 502 ntTSL 2 BASIC4.36□□□□□ -1.71
HLA-DOAP06340 AL356432.3-201ENST00000568952 465 ntBASIC4.36□□□□□ -1.71
HLA-DOAP06340 AP005380.1-201ENST00000584896 547 ntTSL 4 BASIC4.36□□□□□ -1.71
HLA-DOAP06340 UBE2L4-201ENST00000587688 464 ntBASIC4.36□□□□□ -1.71
HLA-DOAP06340 SRGNP1-201ENST00000603392 451 ntBASIC4.36□□□□□ -1.71
HLA-DOAP06340 AC011468.4-201ENST00000603942 409 ntBASIC4.36□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 103.6 ms