Protein–RNA interactions for Protein: P02458

COL2A1, Collagen alpha-1(II) chain, humanhuman

Predicted RBP Predictions only

Length 1,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1P02458 AP001636.3-202ENST00000525714 894 ntTSL 3 BASIC3.31□□□□□ -1.88
COL2A1P02458 AC093025.1-201ENST00000547795 569 ntTSL 2 BASIC3.31□□□□□ -1.88
COL2A1P02458 AC123905.1-201ENST00000552098 541 ntTSL 4 BASIC3.31□□□□□ -1.88
COL2A1P02458 AC009063.1-201ENST00000563342 702 ntBASIC3.31□□□□□ -1.88
COL2A1P02458 AC068276.1-201ENST00000605793 379 ntBASIC3.31□□□□□ -1.88
COL2A1P02458 NEAT1-205ENST00000616315 483 ntTSL 2 BASIC3.31□□□□□ -1.88
COL2A1P02458 AC007742.2-201ENST00000618226 398 ntBASIC3.31□□□□□ -1.88
COL2A1P02458 AC092794.2-201ENST00000620933 563 ntBASIC3.31□□□□□ -1.88
COL2A1P02458 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
COL2A1P02458 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC3.31□□□□□ -1.88
COL2A1P02458 HMGN5-201ENST00000358130 2126 ntAPPRIS P2 TSL 2 BASIC3.3□□□□□ -1.88
COL2A1P02458 RNU6-707P-201ENST00000364647 95 ntBASIC3.3□□□□□ -1.88
COL2A1P02458 PARD3-204ENST00000374768 799 ntTSL 3 BASIC3.3□□□□□ -1.88
COL2A1P02458 AKR1C1-201ENST00000380859 858 ntTSL 3 BASIC3.3□□□□□ -1.88
COL2A1P02458 KRTAP27-1-201ENST00000382835 682 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
COL2A1P02458 RNU6-259P-201ENST00000383999 107 ntBASIC3.3□□□□□ -1.88
COL2A1P02458 RNU6-348P-201ENST00000384386 107 ntBASIC3.3□□□□□ -1.88
COL2A1P02458 TANK-204ENST00000403609 555 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
COL2A1P02458 MTCYBP36-201ENST00000404146 440 ntBASIC3.3□□□□□ -1.88
COL2A1P02458 AL512430.2-201ENST00000406786 339 ntBASIC3.3□□□□□ -1.88
COL2A1P02458 AL583834.1-201ENST00000406943 343 ntBASIC3.3□□□□□ -1.88
COL2A1P02458 RNU6-575P-201ENST00000411326 105 ntBASIC3.3□□□□□ -1.88
COL2A1P02458 MTATP6P27-201ENST00000416987 621 ntBASIC3.3□□□□□ -1.88
COL2A1P02458 AC100848.1-201ENST00000417298 637 ntTSL 3 BASIC3.3□□□□□ -1.88
COL2A1P02458 AL590385.1-201ENST00000419446 462 ntTSL 3 BASIC3.3□□□□□ -1.88
COL2A1P02458 LINC02541-201ENST00000427157 327 ntTSL 3 BASIC3.3□□□□□ -1.88
COL2A1P02458 AC119800.1-201ENST00000429871 423 ntTSL 2 BASIC3.3□□□□□ -1.88
COL2A1P02458 RAB6C-AS1-202ENST00000433431 123 ntBASIC3.3□□□□□ -1.88
COL2A1P02458 AC104653.2-201ENST00000435407 416 ntTSL 3 BASIC3.3□□□□□ -1.88
COL2A1P02458 AL513043.1-201ENST00000439124 535 ntBASIC3.3□□□□□ -1.88
COL2A1P02458 MTND6P18-201ENST00000439477 513 ntBASIC3.3□□□□□ -1.88
COL2A1P02458 AL357793.2-201ENST00000447056 850 ntTSL 3 BASIC3.3□□□□□ -1.88
COL2A1P02458 NFU1P2-201ENST00000448700 469 ntBASIC3.3□□□□□ -1.88
COL2A1P02458 AC093895.1-203ENST00000506814 591 ntTSL 5 BASIC3.3□□□□□ -1.88
COL2A1P02458 TET2-AS1-201ENST00000515414 537 ntTSL 5 BASIC3.3□□□□□ -1.88
COL2A1P02458 SNHG6-202ENST00000520619 479 ntTSL 3 BASIC3.3□□□□□ -1.88
COL2A1P02458 AC013509.1-201ENST00000524269 339 ntTSL 3 BASIC3.3□□□□□ -1.88
COL2A1P02458 AC107918.3-201ENST00000533272 382 ntBASIC3.3□□□□□ -1.88
COL2A1P02458 AL035078.2-201ENST00000533832 326 ntTSL 3 BASIC3.3□□□□□ -1.88
COL2A1P02458 CENPUP2-201ENST00000555897 1186 ntBASIC3.3□□□□□ -1.88
COL2A1P02458 PWRN1-209ENST00000568019 359 ntTSL 3 BASIC3.3□□□□□ -1.88
COL2A1P02458 AC044840.1-201ENST00000577641 472 ntTSL 3 BASIC3.3□□□□□ -1.88
COL2A1P02458 AC090912.2-203ENST00000581177 477 ntTSL 3 BASIC3.3□□□□□ -1.88
COL2A1P02458 MIR4719-201ENST00000585233 84 ntBASIC3.3□□□□□ -1.88
COL2A1P02458 NDUFA8P1-201ENST00000605525 367 ntBASIC3.3□□□□□ -1.88
COL2A1P02458 AC090517.2-201ENST00000614966 680 ntBASIC3.3□□□□□ -1.88
COL2A1P02458 Y_RNA.804-201ENST00000615262 101 ntBASIC3.3□□□□□ -1.88
COL2A1P02458 AC064859.1-201ENST00000624741 174 ntBASIC3.3□□□□□ -1.88
COL2A1P02458 BCLAF1-202ENST00000392348 2610 ntTSL 5 BASIC3.3□□□□□ -1.88
COL2A1P02458 AC073055.1-201ENST00000456901 1621 ntBASIC3.3□□□□□ -1.88
COL2A1P02458 AC005539.1-201ENST00000443768 1479 ntBASIC3.3□□□□□ -1.88
COL2A1P02458 TAS2R9-201ENST00000240691 1075 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
COL2A1P02458 RNU6-374P-201ENST00000364146 108 ntBASIC3.29□□□□□ -1.88
COL2A1P02458 RNU1-112P-201ENST00000364401 164 ntBASIC3.29□□□□□ -1.88
COL2A1P02458 Y_RNA.813-201ENST00000364639 102 ntBASIC3.29□□□□□ -1.88
COL2A1P02458 MIR137-201ENST00000385223 102 ntBASIC3.29□□□□□ -1.88
COL2A1P02458 CXADR-203ENST00000400165 603 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
COL2A1P02458 RNA5SP247-201ENST00000411181 105 ntBASIC3.29□□□□□ -1.88
COL2A1P02458 AL035604.1-201ENST00000416481 531 ntTSL 3 BASIC3.29□□□□□ -1.88
COL2A1P02458 LINC01347-201ENST00000417964 355 ntBASIC3.29□□□□□ -1.88
COL2A1P02458 AL645937.4-201ENST00000419702 389 ntTSL 2 BASIC3.29□□□□□ -1.88
COL2A1P02458 MRPS36P1-201ENST00000421291 307 ntBASIC3.29□□□□□ -1.88
COL2A1P02458 AC116035.1-201ENST00000431057 517 ntTSL 3 BASIC3.29□□□□□ -1.88
COL2A1P02458 AC068533.3-201ENST00000435524 404 ntTSL 5 BASIC3.29□□□□□ -1.88
COL2A1P02458 AC097499.1-201ENST00000444277 208 ntBASIC3.29□□□□□ -1.88
COL2A1P02458 ARL5AP2-201ENST00000444698 533 ntBASIC3.29□□□□□ -1.88
COL2A1P02458 WASF1P1-201ENST00000447560 1131 ntBASIC3.29□□□□□ -1.88
COL2A1P02458 VPS13A-211ENST00000484581 1155 ntTSL 2 BASIC3.29□□□□□ -1.88
COL2A1P02458 AC109486.1-201ENST00000486833 374 ntBASIC3.29□□□□□ -1.88
COL2A1P02458 AC025465.2-201ENST00000502809 608 ntTSL 2 BASIC3.29□□□□□ -1.88
COL2A1P02458 PRDX4P1-201ENST00000507189 574 ntBASIC3.29□□□□□ -1.88
COL2A1P02458 AC107463.1-202ENST00000514526 689 ntTSL 2 BASIC3.29□□□□□ -1.88
COL2A1P02458 AC245166.1-201ENST00000521012 253 ntBASIC3.29□□□□□ -1.88
COL2A1P02458 FAM60DP-201ENST00000524174 632 ntBASIC3.29□□□□□ -1.88
COL2A1P02458 AL450442.1-201ENST00000554042 854 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
COL2A1P02458 AL133371.2-201ENST00000556624 294 ntTSL 3 BASIC3.29□□□□□ -1.88
COL2A1P02458 MIR4528-201ENST00000577763 90 ntBASIC3.29□□□□□ -1.88
COL2A1P02458 AC063943.3-201ENST00000615562 356 ntBASIC3.29□□□□□ -1.88
COL2A1P02458 CYLC1-202ENST00000621735 379 ntAPPRIS ALT2 TSL 3 BASIC3.29□□□□□ -1.88
COL2A1P02458 AC025048.6-202ENST00000627667 438 ntBASIC3.29□□□□□ -1.88
COL2A1P02458 AC087821.2-201ENST00000637086 450 ntBASIC3.29□□□□□ -1.88
COL2A1P02458 ZNF382-210ENST00000639288 834 ntTSL 5 BASIC3.29□□□□□ -1.88
COL2A1P02458 PABPC1P9-201ENST00000426076 1612 ntBASIC3.29□□□□□ -1.88
COL2A1P02458 AL606537.1-201ENST00000607258 2011 ntBASIC3.29□□□□□ -1.88
COL2A1P02458 AC093775.1-201ENST00000624154 1868 ntBASIC3.29□□□□□ -1.88
COL2A1P02458 DICER1-203ENST00000526495 10331 ntAPPRIS P1 TSL 5 BASIC3.29□□□□□ -1.88
COL2A1P02458 RNU4-12P-201ENST00000365233 139 ntBASIC3.28□□□□□ -1.88
COL2A1P02458 MIR512-1-201ENST00000384913 84 ntBASIC3.28□□□□□ -1.88
COL2A1P02458 TRAV26-1-201ENST00000390455 537 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
COL2A1P02458 RNU2-42P-201ENST00000410697 113 ntBASIC3.28□□□□□ -1.88
COL2A1P02458 RPL21P32-201ENST00000419877 477 ntBASIC3.28□□□□□ -1.88
COL2A1P02458 AC068599.1-201ENST00000422558 567 ntTSL 4 BASIC3.28□□□□□ -1.88
COL2A1P02458 MLIP-IT1-201ENST00000441845 643 ntTSL 2 BASIC3.28□□□□□ -1.88
COL2A1P02458 LINC01698-201ENST00000443636 727 ntTSL 3 BASIC3.28□□□□□ -1.88
COL2A1P02458 COX6CP18-201ENST00000448769 222 ntBASIC3.28□□□□□ -1.88
COL2A1P02458 ARPC3P2-201ENST00000457786 533 ntBASIC3.28□□□□□ -1.88
COL2A1P02458 RPL31P13-201ENST00000484151 370 ntBASIC3.28□□□□□ -1.88
COL2A1P02458 FAM92A1P2-202ENST00000504766 877 ntBASIC3.28□□□□□ -1.88
COL2A1P02458 SCOC-206ENST00000506322 687 ntAPPRIS ALT1 TSL 5 BASIC3.28□□□□□ -1.88
COL2A1P02458 ARL2BPP4-201ENST00000506854 471 ntBASIC3.28□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 83.4 ms