Protein–RNA interactions for Protein: P00395

MT-CO1, Cytochrome c oxidase subunit 1, humanhuman

Predictions only

Length 513 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-CO1P00395 AL359273.1-201ENST00000510918 627 ntBASIC4.3□□□□□ -1.72
MT-CO1P00395 LINC02014-201ENST00000514010 713 ntTSL 3 BASIC4.3□□□□□ -1.72
MT-CO1P00395 MTCO1P35-201ENST00000515270 228 ntBASIC4.3□□□□□ -1.72
MT-CO1P00395 SNORA31.3-201ENST00000516029 96 ntBASIC4.3□□□□□ -1.72
MT-CO1P00395 RNA5SP315-201ENST00000516340 116 ntBASIC4.3□□□□□ -1.72
MT-CO1P00395 RN7SKP21-201ENST00000516503 220 ntBASIC4.3□□□□□ -1.72
MT-CO1P00395 RNA5SP312-201ENST00000517068 116 ntBASIC4.3□□□□□ -1.72
MT-CO1P00395 IGKV2D-23-201ENST00000518179 286 ntBASIC4.3□□□□□ -1.72
MT-CO1P00395 AP006587.4-201ENST00000526053 529 ntBASIC4.3□□□□□ -1.72
MT-CO1P00395 AC068205.1-204ENST00000532989 481 ntTSL 3 BASIC4.3□□□□□ -1.72
MT-CO1P00395 PRB1-204ENST00000546254 1170 ntAPPRIS ALT2 TSL 5 BASIC4.3□□□□□ -1.72
MT-CO1P00395 CBX3P5-201ENST00000552017 521 ntBASIC4.3□□□□□ -1.72
MT-CO1P00395 AF123462.1-201ENST00000554307 446 ntTSL 3 BASIC4.3□□□□□ -1.72
MT-CO1P00395 AL359232.1-201ENST00000556361 442 ntTSL 3 BASIC4.3□□□□□ -1.72
MT-CO1P00395 PCLAF-207ENST00000559519 749 ntTSL 2 BASIC4.3□□□□□ -1.72
MT-CO1P00395 AC034105.3-201ENST00000565294 442 ntBASIC4.3□□□□□ -1.72
MT-CO1P00395 AC076968.1-201ENST00000566418 429 ntTSL 5 BASIC4.3□□□□□ -1.72
MT-CO1P00395 AC005951.2-201ENST00000576282 495 ntBASIC4.3□□□□□ -1.72
MT-CO1P00395 AC105094.1-201ENST00000588245 316 ntTSL 3 BASIC4.3□□□□□ -1.72
MT-CO1P00395 AC067852.3-201ENST00000589177 561 ntBASIC4.3□□□□□ -1.72
MT-CO1P00395 AC098617.1-203ENST00000609865 277 ntTSL 5 BASIC4.3□□□□□ -1.72
MT-CO1P00395 AC006023.2-201ENST00000609916 167 ntBASIC4.3□□□□□ -1.72
MT-CO1P00395 C8orf59-212ENST00000615697 483 ntAPPRIS P1 TSL 2 BASIC4.3□□□□□ -1.72
MT-CO1P00395 KCNJ16-211ENST00000615244 4190 ntAPPRIS P1 TSL 4 BASIC4.3□□□□□ -1.72
MT-CO1P00395 FOXP2-207ENST00000393494 2664 ntAPPRIS P2 TSL 5 BASIC4.3□□□□□ -1.72
MT-CO1P00395 IFI44L-201ENST00000370751 5874 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
MT-CO1P00395 AL133243.3-201ENST00000617415 3004 ntBASIC4.3□□□□□ -1.72
MT-CO1P00395 AMY2B-208ENST00000610648 1736 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
MT-CO1P00395 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC4.29□□□□□ -1.72
MT-CO1P00395 R3HCC1L-205ENST00000612478 3337 ntTSL 5 BASIC4.29□□□□□ -1.72
MT-CO1P00395 RNU1-15P-201ENST00000353977 144 ntBASIC4.29□□□□□ -1.72
MT-CO1P00395 Y_RNA.88-201ENST00000363029 99 ntBASIC4.29□□□□□ -1.72
MT-CO1P00395 RNA5SP515-201ENST00000364570 118 ntBASIC4.29□□□□□ -1.72
MT-CO1P00395 RNU6-996P-201ENST00000365438 107 ntBASIC4.29□□□□□ -1.72
MT-CO1P00395 RNU6-946P-201ENST00000383878 107 ntBASIC4.29□□□□□ -1.72
MT-CO1P00395 RNU6-817P-201ENST00000391083 104 ntBASIC4.29□□□□□ -1.72
MT-CO1P00395 RPS26P8-201ENST00000393490 348 ntBASIC4.29□□□□□ -1.72
MT-CO1P00395 RNA5SP118-201ENST00000410385 109 ntBASIC4.29□□□□□ -1.72
MT-CO1P00395 RNU2-71P-201ENST00000411395 189 ntBASIC4.29□□□□□ -1.72
MT-CO1P00395 MAP1LC3BP1-201ENST00000417653 379 ntBASIC4.29□□□□□ -1.72
MT-CO1P00395 AL451054.2-201ENST00000420896 202 ntBASIC4.29□□□□□ -1.72
MT-CO1P00395 AC018630.2-202ENST00000422992 927 ntBASIC4.29□□□□□ -1.72
MT-CO1P00395 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC4.29□□□□□ -1.72
MT-CO1P00395 LINC00375-201ENST00000433074 601 ntTSL 5 BASIC4.29□□□□□ -1.72
MT-CO1P00395 VDAC1P3-201ENST00000434069 851 ntBASIC4.29□□□□□ -1.72
MT-CO1P00395 AC024908.1-202ENST00000441907 764 ntTSL 2 BASIC4.29□□□□□ -1.72
MT-CO1P00395 NFU1P2-201ENST00000448700 469 ntBASIC4.29□□□□□ -1.72
MT-CO1P00395 AC034195.1-202ENST00000451031 610 ntTSL 3 BASIC4.29□□□□□ -1.72
MT-CO1P00395 AL024497.2-201ENST00000457081 317 ntTSL 3 BASIC4.29□□□□□ -1.72
MT-CO1P00395 AL034349.1-201ENST00000458367 549 ntTSL 5 BASIC4.29□□□□□ -1.72
MT-CO1P00395 RPS20P20-201ENST00000460498 340 ntBASIC4.29□□□□□ -1.72
MT-CO1P00395 RPS29P19-201ENST00000479709 171 ntBASIC4.29□□□□□ -1.72
MT-CO1P00395 AL163973.1-201ENST00000484753 577 ntBASIC4.29□□□□□ -1.72
MT-CO1P00395 AF213884.1-201ENST00000488102 463 ntBASIC4.29□□□□□ -1.72
MT-CO1P00395 SCARNA15.2-201ENST00000516409 127 ntBASIC4.29□□□□□ -1.72
MT-CO1P00395 NRON-201ENST00000517270 370 ntBASIC4.29□□□□□ -1.72
MT-CO1P00395 AC099554.1-201ENST00000520032 572 ntTSL 3 BASIC4.29□□□□□ -1.72
MT-CO1P00395 OR5D17P-201ENST00000531492 978 ntBASIC4.29□□□□□ -1.72
MT-CO1P00395 LINC00519-201ENST00000557518 682 ntTSL 2 BASIC4.29□□□□□ -1.72
MT-CO1P00395 AC007224.1-201ENST00000564410 144 ntBASIC4.29□□□□□ -1.72
MT-CO1P00395 AC025272.1-201ENST00000569661 483 ntTSL 2 BASIC4.29□□□□□ -1.72
MT-CO1P00395 RPL23AP87-202ENST00000573039 466 ntBASIC4.29□□□□□ -1.72
MT-CO1P00395 AC008752.3-201ENST00000588113 712 ntBASIC4.29□□□□□ -1.72
MT-CO1P00395 AP002826.1-201ENST00000608835 315 ntBASIC4.29□□□□□ -1.72
MT-CO1P00395 AC023043.4-201ENST00000612081 449 ntBASIC4.29□□□□□ -1.72
MT-CO1P00395 AC244093.3-201ENST00000615419 411 ntTSL 3 BASIC4.29□□□□□ -1.72
MT-CO1P00395 SMCR2_2.1-201ENST00000619783 161 ntBASIC4.29□□□□□ -1.72
MT-CO1P00395 AC025034.2-201ENST00000623264 286 ntBASIC4.29□□□□□ -1.72
MT-CO1P00395 MIR492-201ENST00000638676 116 ntBASIC4.29□□□□□ -1.72
MT-CO1P00395 ATM-228ENST00000639240 498 ntTSL 5 BASIC4.29□□□□□ -1.72
MT-CO1P00395 ATM-230ENST00000640388 578 ntTSL 5 BASIC4.29□□□□□ -1.72
MT-CO1P00395 C1orf112-203ENST00000413811 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.29□□□□□ -1.72
MT-CO1P00395 LINC01902-202ENST00000636983 4607 ntTSL 5 BASIC4.29□□□□□ -1.72
MT-CO1P00395 AC103710.2-202ENST00000641454 2853 ntBASIC4.29□□□□□ -1.72
MT-CO1P00395 IMPG2-201ENST00000193391 8337 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
MT-CO1P00395 TMEM71-201ENST00000356838 1993 ntAPPRIS P3 TSL 1 (best) BASIC4.29□□□□□ -1.72
MT-CO1P00395 PLCB1-233ENST00000637919 5074 ntTSL 5 BASIC4.29□□□□□ -1.72
MT-CO1P00395 PRKACB-208ENST00000394839 4200 ntTSL 2 BASIC4.29□□□□□ -1.72
MT-CO1P00395 GALNT3-202ENST00000409882 2107 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
MT-CO1P00395 ACSM3-201ENST00000289416 2845 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
MT-CO1P00395 AL353746.1-201ENST00000566293 6881 ntBASIC4.28□□□□□ -1.72
MT-CO1P00395 PIGW-206ENST00000620233 2264 ntAPPRIS P1 TSL 2 BASIC4.28□□□□□ -1.72
MT-CO1P00395 RNU6-600P-201ENST00000362524 99 ntBASIC4.28□□□□□ -1.72
MT-CO1P00395 RNU6-451P-201ENST00000362921 107 ntBASIC4.28□□□□□ -1.72
MT-CO1P00395 RNA5SP28-201ENST00000363841 119 ntBASIC4.28□□□□□ -1.72
MT-CO1P00395 SNORA62.1-201ENST00000364287 154 ntBASIC4.28□□□□□ -1.72
MT-CO1P00395 RNU6-61P-201ENST00000365528 109 ntBASIC4.28□□□□□ -1.72
MT-CO1P00395 RNU6-701P-201ENST00000384059 107 ntBASIC4.28□□□□□ -1.72
MT-CO1P00395 SNORA24.1-201ENST00000384401 135 ntBASIC4.28□□□□□ -1.72
MT-CO1P00395 MIR514A1-201ENST00000385133 98 ntBASIC4.28□□□□□ -1.72
MT-CO1P00395 AL513331.1-201ENST00000411908 397 ntBASIC4.28□□□□□ -1.72
MT-CO1P00395 AF241725.1-201ENST00000416182 480 ntTSL 3 BASIC4.28□□□□□ -1.72
MT-CO1P00395 AL161631.1-201ENST00000417933 486 ntBASIC4.28□□□□□ -1.72
MT-CO1P00395 AC133106.1-201ENST00000419029 397 ntTSL 3 BASIC4.28□□□□□ -1.72
MT-CO1P00395 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC4.28□□□□□ -1.72
MT-CO1P00395 AL590783.1-201ENST00000424138 456 ntTSL 2 BASIC4.28□□□□□ -1.72
MT-CO1P00395 AL157378.1-201ENST00000424506 265 ntTSL 5 BASIC4.28□□□□□ -1.72
MT-CO1P00395 HMGB1P31-201ENST00000437242 427 ntBASIC4.28□□□□□ -1.72
MT-CO1P00395 HLA-N-201ENST00000437516 135 ntBASIC4.28□□□□□ -1.72
MT-CO1P00395 PRR16-203ENST00000446965 1152 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 81.4 ms