Protein–RNA interactions for Protein: O95197

RTN3, Reticulon-3, humanhuman

Predicted RBP Predictions only

Length 1,032 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3O95197 SNORA63.1-201ENST00000362493 131 ntBASIC3.73□□□□□ -1.81
RTN3O95197 RNA5SP50-201ENST00000363731 107 ntBASIC3.73□□□□□ -1.81
RTN3O95197 MIR183-201ENST00000384958 110 ntBASIC3.73□□□□□ -1.81
RTN3O95197 MTCYBP36-201ENST00000404146 440 ntBASIC3.73□□□□□ -1.81
RTN3O95197 CCNG1P1-201ENST00000406783 885 ntBASIC3.73□□□□□ -1.81
RTN3O95197 U3.39-201ENST00000408569 239 ntBASIC3.73□□□□□ -1.81
RTN3O95197 RNA5SP293-201ENST00000410527 113 ntBASIC3.73□□□□□ -1.81
RTN3O95197 MAGI2-AS2-201ENST00000411616 476 ntTSL 2 BASIC3.73□□□□□ -1.81
RTN3O95197 AC018630.2-202ENST00000422992 927 ntBASIC3.73□□□□□ -1.81
RTN3O95197 AC008850.1-201ENST00000427546 362 ntBASIC3.73□□□□□ -1.81
RTN3O95197 RPL7L1P10-201ENST00000427790 463 ntBASIC3.73□□□□□ -1.81
RTN3O95197 AL356867.1-201ENST00000429623 299 ntBASIC3.73□□□□□ -1.81
RTN3O95197 INTS6-AS1-201ENST00000434512 466 ntTSL 3 BASIC3.73□□□□□ -1.81
RTN3O95197 SETP5-201ENST00000437270 562 ntBASIC3.73□□□□□ -1.81
RTN3O95197 AL049734.2-201ENST00000441066 616 ntBASIC3.73□□□□□ -1.81
RTN3O95197 AC118469.1-201ENST00000442943 488 ntBASIC3.73□□□□□ -1.81
RTN3O95197 EPS15P1-201ENST00000448836 336 ntBASIC3.73□□□□□ -1.81
RTN3O95197 CYCSP35-201ENST00000451978 304 ntBASIC3.73□□□□□ -1.81
RTN3O95197 RNU7-59P-201ENST00000459101 61 ntBASIC3.73□□□□□ -1.81
RTN3O95197 MTND3P7-201ENST00000474435 343 ntBASIC3.73□□□□□ -1.81
RTN3O95197 AC008629.1-202ENST00000504820 525 ntTSL 4 BASIC3.73□□□□□ -1.81
RTN3O95197 CSN1S1-202ENST00000505782 871 ntAPPRIS ALT2 TSL 5 BASIC3.73□□□□□ -1.81
RTN3O95197 CSN1S1-204ENST00000507772 895 ntAPPRIS ALT2 TSL 5 BASIC3.73□□□□□ -1.81
RTN3O95197 GMPSP1-201ENST00000514075 579 ntBASIC3.73□□□□□ -1.81
RTN3O95197 SCARNA13-201ENST00000516672 275 ntBASIC3.73□□□□□ -1.81
RTN3O95197 SNORA70.18-201ENST00000516696 98 ntBASIC3.73□□□□□ -1.81
RTN3O95197 SNHG6-202ENST00000520619 479 ntTSL 3 BASIC3.73□□□□□ -1.81
RTN3O95197 NDUFB9P3-201ENST00000521269 501 ntBASIC3.73□□□□□ -1.81
RTN3O95197 RGS5-206ENST00000527988 373 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
RTN3O95197 LINC01493-203ENST00000534756 509 ntTSL 3 BASIC3.73□□□□□ -1.81
RTN3O95197 AC068993.2-201ENST00000546563 395 ntTSL 5 BASIC3.73□□□□□ -1.81
RTN3O95197 TIMM9-208ENST00000556007 746 ntTSL 3 BASIC3.73□□□□□ -1.81
RTN3O95197 AL133153.1-201ENST00000557756 303 ntBASIC3.73□□□□□ -1.81
RTN3O95197 AC008507.1-201ENST00000587506 734 ntBASIC3.73□□□□□ -1.81
RTN3O95197 AC083760.1-201ENST00000589621 670 ntBASIC3.73□□□□□ -1.81
RTN3O95197 AC121247.2-201ENST00000604776 136 ntBASIC3.73□□□□□ -1.81
RTN3O95197 MTCO1P12-201ENST00000414273 1543 ntBASIC3.73□□□□□ -1.81
RTN3O95197 ZNF117-203ENST00000610793 1374 ntTSL 2 BASIC3.73□□□□□ -1.81
RTN3O95197 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC3.73□□□□□ -1.81
RTN3O95197 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC3.73□□□□□ -1.81
RTN3O95197 USP33-201ENST00000357428 4155 ntTSL 5 BASIC3.73□□□□□ -1.81
RTN3O95197 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC3.72□□□□□ -1.81
RTN3O95197 MFSD8-233ENST00000641482 4860 ntBASIC3.72□□□□□ -1.81
RTN3O95197 OR10A7-201ENST00000326258 951 ntAPPRIS P1 BASIC3.72□□□□□ -1.81
RTN3O95197 RPS20P2-201ENST00000402520 389 ntBASIC3.72□□□□□ -1.81
RTN3O95197 RPL7P25-201ENST00000404151 721 ntBASIC3.72□□□□□ -1.81
RTN3O95197 AC078974.1-201ENST00000411597 223 ntBASIC3.72□□□□□ -1.81
RTN3O95197 RPL17P12-201ENST00000413391 526 ntBASIC3.72□□□□□ -1.81
RTN3O95197 RPS7P13-201ENST00000413955 498 ntBASIC3.72□□□□□ -1.81
RTN3O95197 UBE2FP1-201ENST00000416536 447 ntBASIC3.72□□□□□ -1.81
RTN3O95197 BX842559.1-201ENST00000419615 532 ntBASIC3.72□□□□□ -1.81
RTN3O95197 AC006989.1-201ENST00000427212 131 ntBASIC3.72□□□□□ -1.81
RTN3O95197 LINC02095-201ENST00000430908 346 ntTSL 2 BASIC3.72□□□□□ -1.81
RTN3O95197 RPL22P17-201ENST00000438729 315 ntBASIC3.72□□□□□ -1.81
RTN3O95197 PRDX3P3-201ENST00000447765 522 ntBASIC3.72□□□□□ -1.81
RTN3O95197 PRSS3P4-201ENST00000453323 162 ntBASIC3.72□□□□□ -1.81
RTN3O95197 BCL2L15-204ENST00000471267 267 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
RTN3O95197 RPS27AP1-201ENST00000475545 471 ntBASIC3.72□□□□□ -1.81
RTN3O95197 AP000797.1-201ENST00000478870 387 ntBASIC3.72□□□□□ -1.81
RTN3O95197 ANKRD36B-207ENST00000497329 649 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
RTN3O95197 AC112204.1-201ENST00000502591 103 ntBASIC3.72□□□□□ -1.81
RTN3O95197 UBA6-AS1-204ENST00000502758 547 ntTSL 4 BASIC3.72□□□□□ -1.81
RTN3O95197 DSTNP2-201ENST00000504533 515 ntBASIC3.72□□□□□ -1.81
RTN3O95197 AC092673.1-201ENST00000510203 428 ntTSL 3 BASIC3.72□□□□□ -1.81
RTN3O95197 RNU6-201P-201ENST00000517100 61 ntBASIC3.72□□□□□ -1.81
RTN3O95197 RNA5SP380-201ENST00000517190 98 ntBASIC3.72□□□□□ -1.81
RTN3O95197 AC103952.1-201ENST00000521872 590 ntTSL 3 BASIC3.72□□□□□ -1.81
RTN3O95197 AC022690.1-201ENST00000526681 550 ntBASIC3.72□□□□□ -1.81
RTN3O95197 PPFIA2-AS1-205ENST00000550938 790 ntTSL 3 BASIC3.72□□□□□ -1.81
RTN3O95197 AL035425.2-201ENST00000563887 563 ntAPPRIS P1 TSL 4 BASIC3.72□□□□□ -1.81
RTN3O95197 RPL23AP84-201ENST00000571193 464 ntBASIC3.72□□□□□ -1.81
RTN3O95197 AC069114.1-201ENST00000580927 287 ntTSL 2 BASIC3.72□□□□□ -1.81
RTN3O95197 AC027514.2-201ENST00000591014 637 ntTSL 3 BASIC3.72□□□□□ -1.81
RTN3O95197 AF131215.7-201ENST00000602443 707 ntBASIC3.72□□□□□ -1.81
RTN3O95197 AP001172.2-201ENST00000602454 467 ntTSL 5 BASIC3.72□□□□□ -1.81
RTN3O95197 STARD13-AS-221ENST00000608197 604 ntTSL 5 BASIC3.72□□□□□ -1.81
RTN3O95197 ZRANB2-AS2-218ENST00000608360 722 ntTSL 5 BASIC3.72□□□□□ -1.81
RTN3O95197 AL355472.4-201ENST00000610233 626 ntBASIC3.72□□□□□ -1.81
RTN3O95197 ANKRD36C-207ENST00000612359 650 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
RTN3O95197 AC068506.1-202ENST00000613388 545 ntTSL 3 BASIC3.72□□□□□ -1.81
RTN3O95197 AC091953.5-201ENST00000622919 233 ntBASIC3.72□□□□□ -1.81
RTN3O95197 U6.105-201ENST00000637379 88 ntBASIC3.72□□□□□ -1.81
RTN3O95197 EVI5-201ENST00000370331 7403 ntAPPRIS P3 TSL 1 (best) BASIC3.72□□□□□ -1.81
RTN3O95197 CUL1P1-201ENST00000509510 2425 ntBASIC3.72□□□□□ -1.81
RTN3O95197 MBNL1-206ENST00000357472 5256 ntTSL 5 BASIC3.72□□□□□ -1.81
RTN3O95197 MBNL1-223ENST00000498502 5258 ntTSL 5 BASIC3.72□□□□□ -1.81
RTN3O95197 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC3.71□□□□□ -1.81
RTN3O95197 ANKRD20A17P-201ENST00000511745 1330 ntBASIC3.71□□□□□ -1.81
RTN3O95197 RNF17-201ENST00000255324 5119 ntAPPRIS P1 TSL 2 BASIC3.71□□□□□ -1.81
RTN3O95197 RNA5SP72-201ENST00000364442 117 ntBASIC3.71□□□□□ -1.82
RTN3O95197 RNU6-805P-201ENST00000365643 106 ntBASIC3.71□□□□□ -1.82
RTN3O95197 RNU6-533P-201ENST00000384144 107 ntBASIC3.71□□□□□ -1.82
RTN3O95197 MIR514A1-201ENST00000385133 98 ntBASIC3.71□□□□□ -1.82
RTN3O95197 EIF4EBP2P3-201ENST00000403144 334 ntBASIC3.71□□□□□ -1.82
RTN3O95197 EDNRB-AS1-201ENST00000422405 601 ntTSL 5 BASIC3.71□□□□□ -1.82
RTN3O95197 AL023581.1-201ENST00000423500 455 ntTSL 2 BASIC3.71□□□□□ -1.82
RTN3O95197 AL355303.1-201ENST00000428920 680 ntTSL 3 BASIC3.71□□□□□ -1.82
RTN3O95197 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC3.71□□□□□ -1.82
RTN3O95197 AL731563.2-201ENST00000431293 291 ntTSL 5 BASIC3.71□□□□□ -1.82
RTN3O95197 ATP5JP1-201ENST00000431631 322 ntBASIC3.71□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 79 ms