Protein–RNA interactions for Protein: O95096

NKX2-2, Homeobox protein Nkx-2.2, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-2O95096 FAM230B-202ENST00000415704 396 ntTSL 3 BASIC3.41□□□□□ -1.86
NKX2-2O95096 NBDY-202ENST00000423617 543 ntAPPRIS P1 TSL 2 BASIC3.41□□□□□ -1.86
NKX2-2O95096 LINC01037-201ENST00000427337 424 ntTSL 5 BASIC3.41□□□□□ -1.86
NKX2-2O95096 AC137499.1-201ENST00000427602 88 ntBASIC3.41□□□□□ -1.86
NKX2-2O95096 AL138775.1-201ENST00000429539 575 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
NKX2-2O95096 AL390961.1-201ENST00000446557 319 ntTSL 2 BASIC3.41□□□□□ -1.86
NKX2-2O95096 AC092422.1-201ENST00000455576 584 ntTSL 4 BASIC3.41□□□□□ -1.86
NKX2-2O95096 CEACAMP4-201ENST00000457676 421 ntBASIC3.41□□□□□ -1.86
NKX2-2O95096 FSBP-201ENST00000481490 1158 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
NKX2-2O95096 LINC01957-201ENST00000506392 751 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
NKX2-2O95096 AC026402.1-201ENST00000513642 170 ntBASIC3.41□□□□□ -1.86
NKX2-2O95096 EGFLAM-AS2-202ENST00000514377 539 ntTSL 3 BASIC3.41□□□□□ -1.86
NKX2-2O95096 Y_RNA.655-201ENST00000515919 96 ntBASIC3.41□□□□□ -1.86
NKX2-2O95096 RN7SKP13-201ENST00000515933 244 ntBASIC3.41□□□□□ -1.86
NKX2-2O95096 RNU6-405P-201ENST00000516637 110 ntBASIC3.41□□□□□ -1.86
NKX2-2O95096 AC100782.1-201ENST00000520778 590 ntTSL 3 BASIC3.41□□□□□ -1.86
NKX2-2O95096 AC011979.2-201ENST00000527568 352 ntBASIC3.41□□□□□ -1.86
NKX2-2O95096 AP000442.2-202ENST00000531311 601 ntTSL 3 BASIC3.41□□□□□ -1.86
NKX2-2O95096 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC3.41□□□□□ -1.86
NKX2-2O95096 SLC12A1-210ENST00000561031 735 ntTSL 2 BASIC3.41□□□□□ -1.86
NKX2-2O95096 AGGF1P4-201ENST00000568249 801 ntBASIC3.41□□□□□ -1.86
NKX2-2O95096 RPL23AP84-201ENST00000571193 464 ntBASIC3.41□□□□□ -1.86
NKX2-2O95096 AC012213.3-201ENST00000577199 777 ntBASIC3.41□□□□□ -1.86
NKX2-2O95096 AP005120.1-201ENST00000579321 352 ntTSL 3 BASIC3.41□□□□□ -1.86
NKX2-2O95096 AC079089.3-201ENST00000603094 673 ntBASIC3.41□□□□□ -1.86
NKX2-2O95096 AC104073.3-201ENST00000610942 955 ntBASIC3.41□□□□□ -1.86
NKX2-2O95096 AL445584.2-201ENST00000614030 616 ntTSL 5 BASIC3.41□□□□□ -1.86
NKX2-2O95096 LINC01232-201ENST00000625254 836 ntTSL 5 BASIC3.41□□□□□ -1.86
NKX2-2O95096 MME-201ENST00000360490 2360 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
NKX2-2O95096 LTN1-207ENST00000614971 7756 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
NKX2-2O95096 AC090740.1-201ENST00000623193 2262 ntBASIC3.41□□□□□ -1.86
NKX2-2O95096 CD36-221ENST00000534394 1741 ntTSL 2 BASIC3.41□□□□□ -1.86
NKX2-2O95096 AF127577.6-201ENST00000623352 2191 ntBASIC3.41□□□□□ -1.86
NKX2-2O95096 AC008568.2-201ENST00000623862 2313 ntBASIC3.41□□□□□ -1.86
NKX2-2O95096 NAIP-205ENST00000508426 4153 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
NKX2-2O95096 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC3.4□□□□□ -1.86
NKX2-2O95096 EIF2AK2-204ENST00000405334 1533 ntTSL 1 (best) BASIC3.4□□□□□ -1.86
NKX2-2O95096 CEP170P1-201ENST00000502249 4587 ntBASIC3.4□□□□□ -1.86
NKX2-2O95096 PLSCR5-201ENST00000443512 1969 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.86
NKX2-2O95096 D21S2088E-201ENST00000262354 1725 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
NKX2-2O95096 AC002456.1-201ENST00000415965 317 ntTSL 5 BASIC3.4□□□□□ -1.87
NKX2-2O95096 AC104777.3-201ENST00000416350 545 ntTSL 3 BASIC3.4□□□□□ -1.87
NKX2-2O95096 MTND3P17-201ENST00000416968 344 ntBASIC3.4□□□□□ -1.87
NKX2-2O95096 UBE2D3P2-201ENST00000424409 445 ntBASIC3.4□□□□□ -1.87
NKX2-2O95096 TTC3-AS1-201ENST00000424733 1097 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
NKX2-2O95096 RPL7L1P10-201ENST00000427790 463 ntBASIC3.4□□□□□ -1.87
NKX2-2O95096 LINC01724-201ENST00000430519 621 ntTSL 3 BASIC3.4□□□□□ -1.87
NKX2-2O95096 AC104850.1-201ENST00000435940 476 ntBASIC3.4□□□□□ -1.87
NKX2-2O95096 AL136380.1-201ENST00000447970 162 ntBASIC3.4□□□□□ -1.87
NKX2-2O95096 LINC01758-201ENST00000448001 458 ntTSL 3 BASIC3.4□□□□□ -1.87
NKX2-2O95096 AL049714.1-201ENST00000466686 347 ntBASIC3.4□□□□□ -1.87
NKX2-2O95096 AL049874.1-201ENST00000489560 388 ntBASIC3.4□□□□□ -1.87
NKX2-2O95096 AC092666.1-202ENST00000493400 442 ntTSL 2 BASIC3.4□□□□□ -1.87
NKX2-2O95096 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC3.4□□□□□ -1.87
NKX2-2O95096 NDUFB4P9-201ENST00000511646 388 ntBASIC3.4□□□□□ -1.87
NKX2-2O95096 AC114797.1-201ENST00000514003 728 ntBASIC3.4□□□□□ -1.87
NKX2-2O95096 RN7SKP298-201ENST00000515950 94 ntBASIC3.4□□□□□ -1.87
NKX2-2O95096 Vault.3-201ENST00000516676 95 ntBASIC3.4□□□□□ -1.87
NKX2-2O95096 NRON-201ENST00000517270 370 ntBASIC3.4□□□□□ -1.87
NKX2-2O95096 MTCO2P4-201ENST00000517968 247 ntBASIC3.4□□□□□ -1.87
NKX2-2O95096 AF117829.1-203ENST00000520306 421 ntTSL 5 BASIC3.4□□□□□ -1.87
NKX2-2O95096 AC007991.1-201ENST00000522680 631 ntBASIC3.4□□□□□ -1.87
NKX2-2O95096 ZNF84-205ENST00000535439 647 ntTSL 5 BASIC3.4□□□□□ -1.87
NKX2-2O95096 AC073530.1-201ENST00000535917 775 ntTSL 5 BASIC3.4□□□□□ -1.87
NKX2-2O95096 AC093012.1-202ENST00000549403 582 ntBASIC3.4□□□□□ -1.87
NKX2-2O95096 AL355836.1-201ENST00000555951 870 ntBASIC3.4□□□□□ -1.87
NKX2-2O95096 AC006504.1-201ENST00000562493 3666 ntBASIC3.4□□□□□ -1.87
NKX2-2O95096 MIR3913-1-201ENST00000577744 102 ntBASIC3.4□□□□□ -1.87
NKX2-2O95096 AP005671.1-201ENST00000581798 463 ntTSL 3 BASIC3.4□□□□□ -1.87
NKX2-2O95096 AC090132.2-201ENST00000615881 347 ntBASIC3.4□□□□□ -1.87
NKX2-2O95096 MUCL1-205ENST00000619042 243 ntAPPRIS ALT2 TSL 5 BASIC3.4□□□□□ -1.87
NKX2-2O95096 AL732618.1-201ENST00000623251 301 ntBASIC3.4□□□□□ -1.87
NKX2-2O95096 SATB1-AS1-269ENST00000630766 591 ntTSL 5 BASIC3.4□□□□□ -1.87
NKX2-2O95096 AL732372.2-225ENST00000642124 456 ntBASIC3.4□□□□□ -1.87
NKX2-2O95096 MGAT4A-204ENST00000414521 3709 ntTSL 2 BASIC3.4□□□□□ -1.87
NKX2-2O95096 RTKN2-201ENST00000315289 2383 ntTSL 2 BASIC3.4□□□□□ -1.87
NKX2-2O95096 CASC1-203ENST00000395987 2363 ntAPPRIS P3 TSL 1 (best) BASIC3.4□□□□□ -1.87
NKX2-2O95096 AKAP6-201ENST00000280979 15006 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
NKX2-2O95096 CFHR4-204ENST00000608469 1601 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
NKX2-2O95096 LRRC39-203ENST00000370138 1466 ntTSL 5 BASIC3.4□□□□□ -1.87
NKX2-2O95096 ZNF439-201ENST00000304030 2622 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
NKX2-2O95096 MLIP-AS1-201ENST00000434196 1534 ntTSL 2 BASIC3.39□□□□□ -1.87
NKX2-2O95096 BIRC3-201ENST00000263464 5197 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
NKX2-2O95096 RNA5SP479-201ENST00000364858 117 ntBASIC3.39□□□□□ -1.87
NKX2-2O95096 CGA-201ENST00000369582 729 ntTSL 5 BASIC3.39□□□□□ -1.87
NKX2-2O95096 U8.11-201ENST00000384699 133 ntBASIC3.39□□□□□ -1.87
NKX2-2O95096 U8.12-201ENST00000384701 133 ntBASIC3.39□□□□□ -1.87
NKX2-2O95096 RPS3AP36-201ENST00000398190 775 ntBASIC3.39□□□□□ -1.87
NKX2-2O95096 AL391417.1-201ENST00000404100 426 ntBASIC3.39□□□□□ -1.87
NKX2-2O95096 AP000567.1-201ENST00000406413 156 ntBASIC3.39□□□□□ -1.87
NKX2-2O95096 MIR1193-201ENST00000408109 78 ntBASIC3.39□□□□□ -1.87
NKX2-2O95096 AC004870.3-202ENST00000412996 432 ntTSL 3 BASIC3.39□□□□□ -1.87
NKX2-2O95096 ISCA1P6-201ENST00000427740 390 ntBASIC3.39□□□□□ -1.87
NKX2-2O95096 AL356867.1-201ENST00000429623 299 ntBASIC3.39□□□□□ -1.87
NKX2-2O95096 DLGAP5P1-201ENST00000430307 464 ntBASIC3.39□□□□□ -1.87
NKX2-2O95096 AL139289.1-201ENST00000436713 731 ntTSL 3 BASIC3.39□□□□□ -1.87
NKX2-2O95096 AC020550.1-201ENST00000447385 163 ntBASIC3.39□□□□□ -1.87
NKX2-2O95096 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC3.39□□□□□ -1.87
NKX2-2O95096 AC005538.1-201ENST00000455991 594 ntTSL 3 BASIC3.39□□□□□ -1.87
NKX2-2O95096 AL359385.1-201ENST00000456509 365 ntBASIC3.39□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 149.4 ms