Protein–RNA interactions for Protein: O60858

TRIM13, E3 ubiquitin-protein ligase TRIM13, humanhuman

Predictions only

Length 407 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13O60858 AL022396.1-201ENST00000427011 386 ntTSL 3 BASIC4.55□□□□□ -1.68
TRIM13O60858 AC097347.1-201ENST00000438499 517 ntTSL 3 BASIC4.55□□□□□ -1.68
TRIM13O60858 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC4.55□□□□□ -1.68
TRIM13O60858 DYNLT3P2-201ENST00000442517 295 ntBASIC4.55□□□□□ -1.68
TRIM13O60858 OSTCP8-201ENST00000445117 448 ntBASIC4.55□□□□□ -1.68
TRIM13O60858 AL590664.1-201ENST00000448065 339 ntBASIC4.55□□□□□ -1.68
TRIM13O60858 LINC01510-203ENST00000458082 626 ntTSL 3 BASIC4.55□□□□□ -1.68
TRIM13O60858 TIPARP-AS1-202ENST00000478005 554 ntTSL 4 BASIC4.55□□□□□ -1.68
TRIM13O60858 AC116562.3-201ENST00000506136 177 ntBASIC4.55□□□□□ -1.68
TRIM13O60858 AC008526.1-201ENST00000509149 338 ntBASIC4.55□□□□□ -1.68
TRIM13O60858 RNU6-138P-201ENST00000515952 107 ntBASIC4.55□□□□□ -1.68
TRIM13O60858 RNU6-470P-201ENST00000515954 104 ntBASIC4.55□□□□□ -1.68
TRIM13O60858 AC021242.2-201ENST00000522765 454 ntTSL 3 BASIC4.55□□□□□ -1.68
TRIM13O60858 AC068587.5-201ENST00000528506 175 ntBASIC4.55□□□□□ -1.68
TRIM13O60858 AC100770.1-201ENST00000532310 322 ntBASIC4.55□□□□□ -1.68
TRIM13O60858 DAZAP2-209ENST00000549732 601 ntTSL 2 BASIC4.55□□□□□ -1.68
TRIM13O60858 LINC01580-201ENST00000555255 561 ntTSL 4 BASIC4.55□□□□□ -1.68
TRIM13O60858 LINC01905-206ENST00000593180 524 ntTSL 2 BASIC4.55□□□□□ -1.68
TRIM13O60858 AC068790.3-201ENST00000602988 553 ntBASIC4.55□□□□□ -1.68
TRIM13O60858 AL713866.2-201ENST00000603579 219 ntBASIC4.55□□□□□ -1.68
TRIM13O60858 AL359313.1-202ENST00000635073 544 ntTSL 4 BASIC4.55□□□□□ -1.68
TRIM13O60858 DLD-204ENST00000437604 1859 ntTSL 2 BASIC4.55□□□□□ -1.68
TRIM13O60858 MS4A1-202ENST00000389939 3372 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
TRIM13O60858 N4BP2L2-201ENST00000267068 9427 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
TRIM13O60858 AC087190.4-201ENST00000574616 8334 ntBASIC4.55□□□□□ -1.68
TRIM13O60858 PGM3-211ENST00000512866 2013 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
TRIM13O60858 SLC17A1-204ENST00000476801 1704 ntAPPRIS P1 TSL 2 BASIC4.55□□□□□ -1.68
TRIM13O60858 DHX40P1-201ENST00000588725 1412 ntBASIC4.55□□□□□ -1.68
TRIM13O60858 AC233263.6-201ENST00000631132 1963 ntBASIC4.54□□□□□ -1.68
TRIM13O60858 C1orf141-203ENST00000371007 2153 ntAPPRIS P3 TSL 5 BASIC4.54□□□□□ -1.68
TRIM13O60858 DEPDC1-202ENST00000456315 5331 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
TRIM13O60858 LUZP2-207ENST00000533227 5016 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
TRIM13O60858 PTPN22-201ENST00000359785 3654 ntAPPRIS P2 TSL 1 (best) BASIC4.54□□□□□ -1.68
TRIM13O60858 TPRG1-201ENST00000345063 5479 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
TRIM13O60858 AC011978.2-201ENST00000569835 2054 ntBASIC4.54□□□□□ -1.68
TRIM13O60858 LZTFL1-216ENST00000539217 4113 ntTSL 2 BASIC4.54□□□□□ -1.68
TRIM13O60858 RNU1-94P-201ENST00000362627 173 ntBASIC4.54□□□□□ -1.68
TRIM13O60858 LZIC-201ENST00000377213 945 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
TRIM13O60858 Y_RNA.461-201ENST00000384263 103 ntBASIC4.54□□□□□ -1.68
TRIM13O60858 RNU6-713P-201ENST00000384761 107 ntBASIC4.54□□□□□ -1.68
TRIM13O60858 DEFB115-201ENST00000400552 267 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
TRIM13O60858 AL356421.1-201ENST00000403255 413 ntBASIC4.54□□□□□ -1.68
TRIM13O60858 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC4.54□□□□□ -1.68
TRIM13O60858 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC4.54□□□□□ -1.68
TRIM13O60858 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC4.54□□□□□ -1.68
TRIM13O60858 MYCBP2-AS1-201ENST00000422231 519 ntTSL 3 BASIC4.54□□□□□ -1.68
TRIM13O60858 AC139712.2-201ENST00000424302 339 ntBASIC4.54□□□□□ -1.68
TRIM13O60858 AL512658.1-202ENST00000433486 400 ntTSL 3 BASIC4.54□□□□□ -1.68
TRIM13O60858 AC078993.1-203ENST00000435789 1037 ntTSL 5 BASIC4.54□□□□□ -1.68
TRIM13O60858 TIMM9P1-201ENST00000436122 256 ntBASIC4.54□□□□□ -1.68
TRIM13O60858 LINC00415-201ENST00000439079 435 ntTSL 3 BASIC4.54□□□□□ -1.68
TRIM13O60858 AC114495.1-201ENST00000441274 436 ntBASIC4.54□□□□□ -1.68
TRIM13O60858 AC112498.1-201ENST00000444401 332 ntBASIC4.54□□□□□ -1.68
TRIM13O60858 H2AFZP5-201ENST00000446960 382 ntBASIC4.54□□□□□ -1.68
TRIM13O60858 AL078587.1-201ENST00000448580 542 ntTSL 5 BASIC4.54□□□□□ -1.68
TRIM13O60858 AC010733.1-201ENST00000451515 401 ntBASIC4.54□□□□□ -1.68
TRIM13O60858 AC004801.2-202ENST00000463559 283 ntBASIC4.54□□□□□ -1.68
TRIM13O60858 PPIAP21-201ENST00000464473 501 ntBASIC4.54□□□□□ -1.68
TRIM13O60858 MRPL36-203ENST00000505818 595 ntAPPRIS P1 TSL 3 BASIC4.54□□□□□ -1.68
TRIM13O60858 AC126768.1-201ENST00000511698 490 ntTSL 3 BASIC4.54□□□□□ -1.68
TRIM13O60858 SNORD116.3-201ENST00000517176 78 ntBASIC4.54□□□□□ -1.68
TRIM13O60858 AC131281.1-201ENST00000522984 164 ntBASIC4.54□□□□□ -1.68
TRIM13O60858 AC044810.3-201ENST00000527565 589 ntTSL 3 BASIC4.54□□□□□ -1.68
TRIM13O60858 AC092746.1-201ENST00000542819 562 ntTSL 4 BASIC4.54□□□□□ -1.68
TRIM13O60858 AL359237.1-202ENST00000556168 487 ntTSL 5 BASIC4.54□□□□□ -1.68
TRIM13O60858 IGHV4OR15-8-201ENST00000557788 353 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
TRIM13O60858 SLC14A2-AS1-201ENST00000585759 494 ntTSL 3 BASIC4.54□□□□□ -1.68
TRIM13O60858 DAB1-AS1-208ENST00000586465 748 ntTSL 5 BASIC4.54□□□□□ -1.68
TRIM13O60858 AC078899.3-201ENST00000599065 212 ntBASIC4.54□□□□□ -1.68
TRIM13O60858 AL391358.1-201ENST00000605342 190 ntBASIC4.54□□□□□ -1.68
TRIM13O60858 AC009229.3-201ENST00000608056 282 ntBASIC4.54□□□□□ -1.68
TRIM13O60858 NAA60-237ENST00000615865 326 ntTSL 5 BASIC4.54□□□□□ -1.68
TRIM13O60858 AL355365.1-201ENST00000616480 294 ntBASIC4.54□□□□□ -1.68
TRIM13O60858 PISRT1.1-201ENST00000616930 107 ntBASIC4.54□□□□□ -1.68
TRIM13O60858 AC135068.2-201ENST00000622410 353 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
TRIM13O60858 AC091905.2-201ENST00000623143 306 ntBASIC4.54□□□□□ -1.68
TRIM13O60858 AC091903.1-201ENST00000624322 454 ntBASIC4.54□□□□□ -1.68
TRIM13O60858 CYP3A51P-201ENST00000633513 256 ntBASIC4.54□□□□□ -1.68
TRIM13O60858 OR4C15-202ENST00000642128 951 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
TRIM13O60858 ZNF645-201ENST00000323684 1519 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
TRIM13O60858 AC010615.1-201ENST00000594254 1764 ntBASIC4.54□□□□□ -1.68
TRIM13O60858 PICALM-209ENST00000528398 2049 ntTSL 2 BASIC4.54□□□□□ -1.68
TRIM13O60858 ARHGEF38-202ENST00000420470 5454 ntAPPRIS P1 TSL 5 BASIC4.54□□□□□ -1.68
TRIM13O60858 FCHO2-207ENST00000512348 2700 ntTSL 2 BASIC4.54□□□□□ -1.68
TRIM13O60858 C12orf45-204ENST00000552951 23529 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
TRIM13O60858 AC091812.1-201ENST00000432235 1948 ntBASIC4.54□□□□□ -1.68
TRIM13O60858 APC-207ENST00000508376 10619 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
TRIM13O60858 AL391684.1-202ENST00000641293 1636 ntBASIC4.54□□□□□ -1.68
TRIM13O60858 TLR3-201ENST00000296795 6015 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
TRIM13O60858 AC130650.2-201ENST00000618736 2403 ntBASIC4.53□□□□□ -1.68
TRIM13O60858 MAPK10-206ENST00000395161 4186 ntTSL 5 BASIC4.53□□□□□ -1.68
TRIM13O60858 ABI3BP-206ENST00000471714 6783 ntAPPRIS ALT2 TSL 5 BASIC4.53□□□□□ -1.68
TRIM13O60858 WDR17-204ENST00000507824 4119 ntTSL 5 BASIC4.53□□□□□ -1.68
TRIM13O60858 KLRD1-204ENST00000381908 15549 ntAPPRIS P4 TSL 1 (best) BASIC4.53□□□□□ -1.68
TRIM13O60858 MTRR-202ENST00000440940 3215 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
TRIM13O60858 RNU1-108P-201ENST00000362556 161 ntBASIC4.53□□□□□ -1.68
TRIM13O60858 Y_RNA.152-201ENST00000363578 100 ntBASIC4.53□□□□□ -1.68
TRIM13O60858 Y_RNA.210-201ENST00000364161 110 ntBASIC4.53□□□□□ -1.68
TRIM13O60858 RNU6-200P-201ENST00000364743 107 ntBASIC4.53□□□□□ -1.68
TRIM13O60858 BANF2-202ENST00000377805 444 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 96.3 ms