Protein–RNA interactions for Protein: O60563

CCNT1, Cyclin-T1, humanhuman

Known RBP Predictions only

Length 726 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNT1O60563 AC244098.2-201ENST00000422068 99 ntBASIC3.87□□□□□ -1.79
CCNT1O60563 AC090952.1-201ENST00000424242 446 ntTSL 3 BASIC3.87□□□□□ -1.79
CCNT1O60563 AC093843.1-201ENST00000424395 512 ntTSL 2 BASIC3.87□□□□□ -1.79
CCNT1O60563 AL353777.1-201ENST00000425552 326 ntBASIC3.87□□□□□ -1.79
CCNT1O60563 AC010975.2-201ENST00000427781 588 ntBASIC3.87□□□□□ -1.79
CCNT1O60563 HMGN2P21-201ENST00000447764 270 ntBASIC3.87□□□□□ -1.79
CCNT1O60563 NANOGNBP1-201ENST00000448444 480 ntBASIC3.87□□□□□ -1.79
CCNT1O60563 GAPDHP17-201ENST00000449858 1001 ntBASIC3.87□□□□□ -1.79
CCNT1O60563 CYCSP35-201ENST00000451978 304 ntBASIC3.87□□□□□ -1.79
CCNT1O60563 AL136097.1-201ENST00000456945 913 ntBASIC3.87□□□□□ -1.79
CCNT1O60563 AL390730.1-201ENST00000457106 692 ntTSL 2 BASIC3.87□□□□□ -1.79
CCNT1O60563 snoU109.1-201ENST00000459339 135 ntBASIC3.87□□□□□ -1.79
CCNT1O60563 SIDT1-AS1-201ENST00000462180 465 ntTSL 3 BASIC3.87□□□□□ -1.79
CCNT1O60563 TIPARP-AS1-202ENST00000478005 554 ntTSL 4 BASIC3.87□□□□□ -1.79
CCNT1O60563 ZBTB20-AS2-201ENST00000478301 372 ntTSL 2 BASIC3.87□□□□□ -1.79
CCNT1O60563 AL049830.2-201ENST00000480072 201 ntBASIC3.87□□□□□ -1.79
CCNT1O60563 APOA2-210ENST00000491350 263 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
CCNT1O60563 AC138853.1-201ENST00000503549 823 ntBASIC3.87□□□□□ -1.79
CCNT1O60563 LINC02198-202ENST00000505371 526 ntTSL 5 BASIC3.87□□□□□ -1.79
CCNT1O60563 MDM4-213ENST00000507825 481 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
CCNT1O60563 PCBP2P3-201ENST00000509726 843 ntBASIC3.87□□□□□ -1.79
CCNT1O60563 FCF1P8-201ENST00000510322 597 ntBASIC3.87□□□□□ -1.79
CCNT1O60563 AC021146.1-201ENST00000511202 716 ntBASIC3.87□□□□□ -1.79
CCNT1O60563 IL7R-208ENST00000511982 612 ntTSL 2 BASIC3.87□□□□□ -1.79
CCNT1O60563 RNU2-46P-201ENST00000517038 113 ntBASIC3.87□□□□□ -1.79
CCNT1O60563 AP002768.1-201ENST00000526741 320 ntTSL 3 BASIC3.87□□□□□ -1.79
CCNT1O60563 AC025917.1-202ENST00000566344 635 ntTSL 5 BASIC3.87□□□□□ -1.79
CCNT1O60563 AC093515.1-201ENST00000567103 445 ntTSL 5 BASIC3.87□□□□□ -1.79
CCNT1O60563 AL356432.3-201ENST00000568952 465 ntBASIC3.87□□□□□ -1.79
CCNT1O60563 ZNF415P1-201ENST00000582279 1166 ntBASIC3.87□□□□□ -1.79
CCNT1O60563 TCF4-AS2-201ENST00000586467 445 ntTSL 2 BASIC3.87□□□□□ -1.79
CCNT1O60563 DEFB131E-202ENST00000602581 683 ntBASIC3.87□□□□□ -1.79
CCNT1O60563 AC090578.1-201ENST00000604955 591 ntBASIC3.87□□□□□ -1.79
CCNT1O60563 NDUFA8P1-201ENST00000605525 367 ntBASIC3.87□□□□□ -1.79
CCNT1O60563 AL159972.1-201ENST00000625150 448 ntBASIC3.87□□□□□ -1.79
CCNT1O60563 AC010149.2-201ENST00000637608 315 ntBASIC3.87□□□□□ -1.79
CCNT1O60563 TMEM71-202ENST00000377901 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC3.87□□□□□ -1.79
CCNT1O60563 AC009902.3-201ENST00000606235 2172 ntBASIC3.87□□□□□ -1.79
CCNT1O60563 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
CCNT1O60563 NUDT12-201ENST00000230792 3492 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
CCNT1O60563 USP8P1-201ENST00000494673 3183 ntBASIC3.87□□□□□ -1.79
CCNT1O60563 MTND4P5-201ENST00000435821 1374 ntBASIC3.87□□□□□ -1.79
CCNT1O60563 RBM39-201ENST00000253363 2488 ntAPPRIS P4 TSL 1 (best) BASIC3.86□□□□□ -1.79
CCNT1O60563 MME-211ENST00000492661 2854 ntAPPRIS P1 TSL 2 BASIC3.86□□□□□ -1.79
CCNT1O60563 SAMD3-214ENST00000532763 3690 ntTSL 5 BASIC3.86□□□□□ -1.79
CCNT1O60563 AC092447.7-201ENST00000422212 1621 ntBASIC3.86□□□□□ -1.79
CCNT1O60563 OR5B3-201ENST00000309403 945 ntAPPRIS P1 BASIC3.86□□□□□ -1.79
CCNT1O60563 Y_RNA.3-201ENST00000362331 103 ntBASIC3.86□□□□□ -1.79
CCNT1O60563 MIR135A2-201ENST00000384854 100 ntBASIC3.86□□□□□ -1.79
CCNT1O60563 TRAJ32-201ENST00000390505 66 ntAPPRIS P1 BASIC3.86□□□□□ -1.79
CCNT1O60563 PTMAP5-201ENST00000393073 333 ntBASIC3.86□□□□□ -1.79
CCNT1O60563 RPA3-203ENST00000401447 414 ntTSL 3 BASIC3.86□□□□□ -1.79
CCNT1O60563 ERMN-204ENST00000409925 556 ntTSL 4 BASIC3.86□□□□□ -1.79
CCNT1O60563 RN7SKP111-201ENST00000410349 271 ntBASIC3.86□□□□□ -1.79
CCNT1O60563 LINC01312-201ENST00000412745 775 ntTSL 3 BASIC3.86□□□□□ -1.79
CCNT1O60563 BX323014.1-201ENST00000412876 237 ntBASIC3.86□□□□□ -1.79
CCNT1O60563 AL162254.1-202ENST00000419604 497 ntTSL 5 BASIC3.86□□□□□ -1.79
CCNT1O60563 USP9YP36-201ENST00000424581 829 ntBASIC3.86□□□□□ -1.79
CCNT1O60563 ISCA1P6-201ENST00000427740 390 ntBASIC3.86□□□□□ -1.79
CCNT1O60563 AP000907.1-201ENST00000428428 510 ntBASIC3.86□□□□□ -1.79
CCNT1O60563 RAC1P7-201ENST00000445367 377 ntBASIC3.86□□□□□ -1.79
CCNT1O60563 UTAT33-202ENST00000449177 565 ntTSL 2 BASIC3.86□□□□□ -1.79
CCNT1O60563 DNM3-IT1-201ENST00000450800 396 ntTSL 3 BASIC3.86□□□□□ -1.79
CCNT1O60563 LINC01445-202ENST00000458615 679 ntTSL 2 BASIC3.86□□□□□ -1.79
CCNT1O60563 RPL23AP67-201ENST00000465341 474 ntBASIC3.86□□□□□ -1.79
CCNT1O60563 AC026784.1-201ENST00000507986 352 ntBASIC3.86□□□□□ -1.79
CCNT1O60563 AC079160.1-201ENST00000513489 739 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
CCNT1O60563 RNU6-1095P-201ENST00000516148 108 ntBASIC3.86□□□□□ -1.79
CCNT1O60563 DUXAP2-201ENST00000519198 589 ntBASIC3.86□□□□□ -1.79
CCNT1O60563 AC107934.1-201ENST00000522215 217 ntBASIC3.86□□□□□ -1.79
CCNT1O60563 ZNF84-205ENST00000535439 647 ntTSL 5 BASIC3.86□□□□□ -1.79
CCNT1O60563 AL133271.1-201ENST00000538229 291 ntBASIC3.86□□□□□ -1.79
CCNT1O60563 AC007513.1-201ENST00000548740 379 ntTSL 3 BASIC3.86□□□□□ -1.79
CCNT1O60563 CCNG2P1-201ENST00000549521 1000 ntBASIC3.86□□□□□ -1.79
CCNT1O60563 TGIF1P1-201ENST00000558095 802 ntBASIC3.86□□□□□ -1.79
CCNT1O60563 AC012378.1-201ENST00000561155 364 ntTSL 3 BASIC3.86□□□□□ -1.79
CCNT1O60563 AC087481.2-201ENST00000565492 330 ntBASIC3.86□□□□□ -1.79
CCNT1O60563 SNRPGP15-201ENST00000600149 222 ntBASIC3.86□□□□□ -1.79
CCNT1O60563 CKS1BP3-201ENST00000600888 237 ntBASIC3.86□□□□□ -1.79
CCNT1O60563 AC008739.3-201ENST00000603262 127 ntBASIC3.86□□□□□ -1.79
CCNT1O60563 AL136363.2-201ENST00000604173 851 ntBASIC3.86□□□□□ -1.79
CCNT1O60563 AC011451.2-201ENST00000604303 598 ntBASIC3.86□□□□□ -1.79
CCNT1O60563 AC091304.9-201ENST00000612091 226 ntBASIC3.86□□□□□ -1.79
CCNT1O60563 AC108479.2-201ENST00000617314 601 ntBASIC3.86□□□□□ -1.79
CCNT1O60563 AC091953.2-201ENST00000623979 160 ntBASIC3.86□□□□□ -1.79
CCNT1O60563 PCBP1-AS1-348ENST00000629506 667 ntTSL 5 BASIC3.86□□□□□ -1.79
CCNT1O60563 OR5B3-202ENST00000641865 1046 ntAPPRIS P1 BASIC3.86□□□□□ -1.79
CCNT1O60563 MCF2-210ENST00000536274 3461 ntAPPRIS ALT2 TSL 2 BASIC3.86□□□□□ -1.79
CCNT1O60563 FKTN-209ENST00000602661 2576 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
CCNT1O60563 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC3.86□□□□□ -1.79
CCNT1O60563 MTND5P29-201ENST00000458676 1807 ntBASIC3.86□□□□□ -1.79
CCNT1O60563 ZNF85-201ENST00000300540 1531 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
CCNT1O60563 MTCO1P12-201ENST00000414273 1543 ntBASIC3.85□□□□□ -1.79
CCNT1O60563 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
CCNT1O60563 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC3.85□□□□□ -1.79
CCNT1O60563 SEMA3D-201ENST00000284136 6265 ntAPPRIS P1 TSL 5 BASIC3.85□□□□□ -1.79
CCNT1O60563 GNG5P1-201ENST00000255500 204 ntBASIC3.85□□□□□ -1.79
CCNT1O60563 MDM2-207ENST00000360430 891 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
CCNT1O60563 RNY4P16-201ENST00000364768 94 ntBASIC3.85□□□□□ -1.79
CCNT1O60563 MIR23B-201ENST00000384832 97 ntBASIC3.85□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 10.9 ms