Protein–RNA interactions for Protein: O43490

PROM1, Prominin-1, humanhuman

Predictions only

Length 865 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1O43490 SNORA32.2-201ENST00000384049 122 ntBASIC4.07□□□□□ -1.76
PROM1O43490 RNU6-74P-201ENST00000384235 107 ntBASIC4.07□□□□□ -1.76
PROM1O43490 RNU6-39P-201ENST00000384344 107 ntBASIC4.07□□□□□ -1.76
PROM1O43490 MIR19A-201ENST00000384878 82 ntBASIC4.07□□□□□ -1.76
PROM1O43490 RNU6-278P-201ENST00000390945 109 ntBASIC4.07□□□□□ -1.76
PROM1O43490 AL162578.1-201ENST00000406202 378 ntBASIC4.07□□□□□ -1.76
PROM1O43490 HMGN1P24-201ENST00000412282 298 ntBASIC4.07□□□□□ -1.76
PROM1O43490 RPS20P15-201ENST00000412792 311 ntBASIC4.07□□□□□ -1.76
PROM1O43490 AL133343.3-201ENST00000413983 469 ntTSL 2 BASIC4.07□□□□□ -1.76
PROM1O43490 RAC1P3-201ENST00000416129 580 ntBASIC4.07□□□□□ -1.76
PROM1O43490 LINC00368-201ENST00000422994 650 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
PROM1O43490 RPL35AP12-201ENST00000425362 338 ntBASIC4.07□□□□□ -1.76
PROM1O43490 AL157831.1-201ENST00000426134 473 ntBASIC4.07□□□□□ -1.76
PROM1O43490 AL590378.1-201ENST00000426818 303 ntTSL 3 BASIC4.07□□□□□ -1.76
PROM1O43490 AL353612.1-201ENST00000428769 465 ntTSL 3 BASIC4.07□□□□□ -1.76
PROM1O43490 RPS20P5-201ENST00000434808 360 ntBASIC4.07□□□□□ -1.76
PROM1O43490 AC023669.2-201ENST00000436266 239 ntTSL 3 BASIC4.07□□□□□ -1.76
PROM1O43490 AC007953.1-201ENST00000450500 560 ntTSL 4 BASIC4.07□□□□□ -1.76
PROM1O43490 AL353691.1-201ENST00000451332 387 ntBASIC4.07□□□□□ -1.76
PROM1O43490 LINC00395-202ENST00000451570 415 ntTSL 3 BASIC4.07□□□□□ -1.76
PROM1O43490 SNAP25-AS1-205ENST00000453544 368 ntTSL 5 BASIC4.07□□□□□ -1.76
PROM1O43490 RPL23AP81-201ENST00000455252 467 ntBASIC4.07□□□□□ -1.76
PROM1O43490 AC108059.3-201ENST00000456388 214 ntBASIC4.07□□□□□ -1.76
PROM1O43490 EIF4EP3-201ENST00000498782 656 ntBASIC4.07□□□□□ -1.76
PROM1O43490 AC020593.1-201ENST00000507399 299 ntBASIC4.07□□□□□ -1.76
PROM1O43490 LINC01333-201ENST00000508083 724 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
PROM1O43490 MTCO3P44-201ENST00000510977 541 ntBASIC4.07□□□□□ -1.76
PROM1O43490 RNU6-27P-201ENST00000516146 107 ntBASIC4.07□□□□□ -1.76
PROM1O43490 RNU6-798P-201ENST00000516912 103 ntBASIC4.07□□□□□ -1.76
PROM1O43490 AC084768.1-201ENST00000518926 923 ntTSL 3 BASIC4.07□□□□□ -1.76
PROM1O43490 OR5B19P-201ENST00000531766 928 ntBASIC4.07□□□□□ -1.76
PROM1O43490 TMEM106C-220ENST00000552561 810 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
PROM1O43490 AC125603.1-201ENST00000552718 366 ntTSL 3 BASIC4.07□□□□□ -1.76
PROM1O43490 LINC00519-201ENST00000557518 682 ntTSL 2 BASIC4.07□□□□□ -1.76
PROM1O43490 AC023034.1-201ENST00000558141 518 ntTSL 3 BASIC4.07□□□□□ -1.76
PROM1O43490 AC037471.2-201ENST00000564941 598 ntBASIC4.07□□□□□ -1.76
PROM1O43490 AC106785.1-201ENST00000565935 262 ntBASIC4.07□□□□□ -1.76
PROM1O43490 MIR3138-201ENST00000585238 82 ntBASIC4.07□□□□□ -1.76
PROM1O43490 GLUD1P4-201ENST00000590914 418 ntBASIC4.07□□□□□ -1.76
PROM1O43490 AC243960.4-201ENST00000600532 288 ntBASIC4.07□□□□□ -1.76
PROM1O43490 LINC00993-204ENST00000606476 500 ntTSL 5 BASIC4.07□□□□□ -1.76
PROM1O43490 AC023043.4-201ENST00000612081 449 ntBASIC4.07□□□□□ -1.76
PROM1O43490 AC093913.1-201ENST00000614178 329 ntBASIC4.07□□□□□ -1.76
PROM1O43490 uc_338.32-201ENST00000615087 172 ntBASIC4.07□□□□□ -1.76
PROM1O43490 AC005858.4-201ENST00000623191 700 ntBASIC4.07□□□□□ -1.76
PROM1O43490 LINC01002-227ENST00000633363 541 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
PROM1O43490 ASAH2-201ENST00000329428 2184 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
PROM1O43490 MARK2P15-201ENST00000432204 2186 ntBASIC4.07□□□□□ -1.76
PROM1O43490 CEP152-203ENST00000399334 5097 ntAPPRIS P3 TSL 1 (best) BASIC4.07□□□□□ -1.76
PROM1O43490 FMN2-207ENST00000545751 1913 ntTSL 5 BASIC4.07□□□□□ -1.76
PROM1O43490 AC006020.1-201ENST00000420179 1854 ntBASIC4.07□□□□□ -1.76
PROM1O43490 ZNF85-203ENST00000345030 1689 ntAPPRIS ALT2 TSL 5 BASIC4.06□□□□□ -1.76
PROM1O43490 ENPP2-202ENST00000259486 3233 ntAPPRIS P3 TSL 1 (best) BASIC4.06□□□□□ -1.76
PROM1O43490 LINC01239-202ENST00000436786 2347 ntTSL 2 BASIC4.06□□□□□ -1.76
PROM1O43490 ZNF734P-201ENST00000419494 1534 ntBASIC4.06□□□□□ -1.76
PROM1O43490 XCL1-201ENST00000367818 1367 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
PROM1O43490 SEC31A-203ENST00000348405 4012 ntAPPRIS ALT2 TSL 1 (best) BASIC4.06□□□□□ -1.76
PROM1O43490 RPL7P26-201ENST00000333817 754 ntBASIC4.06□□□□□ -1.76
PROM1O43490 MT-ND4L-201ENST00000361335 297 ntAPPRIS P1 BASIC4.06□□□□□ -1.76
PROM1O43490 SNORA31-201ENST00000362607 130 ntBASIC4.06□□□□□ -1.76
PROM1O43490 Y_RNA.255-201ENST00000364581 97 ntBASIC4.06□□□□□ -1.76
PROM1O43490 RNA5SP189-201ENST00000364920 115 ntBASIC4.06□□□□□ -1.76
PROM1O43490 MIR3074-201ENST00000384885 81 ntBASIC4.06□□□□□ -1.76
PROM1O43490 snosnR66.1-201ENST00000391095 99 ntBASIC4.06□□□□□ -1.76
PROM1O43490 CD3D-202ENST00000392884 476 ntTSL 2 BASIC4.06□□□□□ -1.76
PROM1O43490 AL583835.1-201ENST00000399570 407 ntBASIC4.06□□□□□ -1.76
PROM1O43490 AL356057.2-201ENST00000403318 432 ntBASIC4.06□□□□□ -1.76
PROM1O43490 PDCL2P1-201ENST00000419302 352 ntBASIC4.06□□□□□ -1.76
PROM1O43490 AL365400.1-201ENST00000431854 640 ntBASIC4.06□□□□□ -1.76
PROM1O43490 RPL36AP53-201ENST00000432891 316 ntBASIC4.06□□□□□ -1.76
PROM1O43490 LANCL1-AS1-203ENST00000433296 864 ntTSL 2 BASIC4.06□□□□□ -1.76
PROM1O43490 TTTY20-201ENST00000434487 259 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
PROM1O43490 TAAR7P-201ENST00000436141 242 ntBASIC4.06□□□□□ -1.76
PROM1O43490 DDX3P2-201ENST00000446138 111 ntBASIC4.06□□□□□ -1.76
PROM1O43490 AL359073.1-201ENST00000448036 403 ntBASIC4.06□□□□□ -1.76
PROM1O43490 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC4.06□□□□□ -1.76
PROM1O43490 AC093278.1-201ENST00000494700 600 ntBASIC4.06□□□□□ -1.76
PROM1O43490 AC092440.1-201ENST00000512563 571 ntTSL 4 BASIC4.06□□□□□ -1.76
PROM1O43490 AC016598.2-201ENST00000514942 525 ntTSL 5 BASIC4.06□□□□□ -1.76
PROM1O43490 RNA5SP73-201ENST00000516744 108 ntBASIC4.06□□□□□ -1.76
PROM1O43490 LINC02545-201ENST00000525381 306 ntTSL 3 BASIC4.06□□□□□ -1.76
PROM1O43490 AC011979.2-201ENST00000527568 352 ntBASIC4.06□□□□□ -1.76
PROM1O43490 AP003498.1-201ENST00000532530 347 ntTSL 3 BASIC4.06□□□□□ -1.76
PROM1O43490 AC103798.1-201ENST00000532562 376 ntTSL 2 BASIC4.06□□□□□ -1.76
PROM1O43490 TRAV8-5-201ENST00000537369 341 ntBASIC4.06□□□□□ -1.76
PROM1O43490 AC006064.5-201ENST00000541782 248 ntBASIC4.06□□□□□ -1.76
PROM1O43490 AL121821.1-201ENST00000557067 530 ntTSL 3 BASIC4.06□□□□□ -1.76
PROM1O43490 LINC02328-203ENST00000557195 682 ntTSL 3 BASIC4.06□□□□□ -1.76
PROM1O43490 AC068397.1-201ENST00000560337 531 ntTSL 2 BASIC4.06□□□□□ -1.76
PROM1O43490 FOPNL-205ENST00000573429 646 ntTSL 3 BASIC4.06□□□□□ -1.76
PROM1O43490 AC105224.1-201ENST00000587055 421 ntBASIC4.06□□□□□ -1.76
PROM1O43490 AP001429.1-201ENST00000602568 530 ntBASIC4.06□□□□□ -1.76
PROM1O43490 AL031666.3-201ENST00000609320 1006 ntBASIC4.06□□□□□ -1.76
PROM1O43490 KCNJ13-201ENST00000233826 2950 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
PROM1O43490 ZNF510-201ENST00000223428 5154 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
PROM1O43490 DTWD1-201ENST00000251250 13776 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
PROM1O43490 THEMIS-205ENST00000626040 3179 ntAPPRIS ALT2 TSL 2 BASIC4.06□□□□□ -1.76
PROM1O43490 MTUS1-216ENST00000519263 4089 ntTSL 2 BASIC4.05□□□□□ -1.76
PROM1O43490 R3HDM1-220ENST00000628915 4325 ntTSL 5 BASIC4.05□□□□□ -1.76
PROM1O43490 AC009975.2-201ENST00000635306 1429 ntTSL 5 BASIC4.05□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 83.9 ms