Protein–RNA interactions for Protein: O43395

PRPF3, U4/U6 small nuclear ribonucleoprotein Prp3, humanhuman

Known RBP Predictions only

Length 683 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF3O43395 AC136475.10-201ENST00000620253 385 ntBASIC4.37□□□□□ -1.71
PRPF3O43395 LINC01002-206ENST00000631772 539 ntTSL 4 BASIC4.37□□□□□ -1.71
PRPF3O43395 CCNYL2-203ENST00000638057 730 ntTSL 3 BASIC4.37□□□□□ -1.71
PRPF3O43395 ERBB4-203ENST00000402597 11699 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
PRPF3O43395 AC104662.3-202ENST00000507794 4055 ntTSL 2 BASIC4.37□□□□□ -1.71
PRPF3O43395 AC091534.1-201ENST00000548779 1751 ntTSL 2 BASIC4.37□□□□□ -1.71
PRPF3O43395 ETV1-203ENST00000403527 3363 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
PRPF3O43395 AC090740.1-201ENST00000623193 2262 ntBASIC4.37□□□□□ -1.71
PRPF3O43395 OR10J1-203ENST00000642080 3503 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
PRPF3O43395 MFN1-201ENST00000263969 2754 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
PRPF3O43395 LINC01094-203ENST00000504675 1985 ntTSL 2 BASIC4.36□□□□□ -1.71
PRPF3O43395 CCDC178-205ENST00000406524 3039 ntAPPRIS ALT2 TSL 5 BASIC4.36□□□□□ -1.71
PRPF3O43395 ARAP2-210ENST00000618163 2592 ntTSL 5 BASIC4.36□□□□□ -1.71
PRPF3O43395 CUL4B-202ENST00000371322 4902 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
PRPF3O43395 PTPN22-202ENST00000420377 2726 ntAPPRIS ALT2 TSL 1 (best) BASIC4.36□□□□□ -1.71
PRPF3O43395 SLC2A2-201ENST00000314251 3210 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
PRPF3O43395 LATS1-201ENST00000253339 4256 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
PRPF3O43395 RNU6-1097P-201ENST00000363586 107 ntBASIC4.36□□□□□ -1.71
PRPF3O43395 STAP1-202ENST00000396225 1146 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
PRPF3O43395 RNA5SP129-201ENST00000410276 118 ntBASIC4.36□□□□□ -1.71
PRPF3O43395 LINC00279-201ENST00000413486 473 ntTSL 3 BASIC4.36□□□□□ -1.71
PRPF3O43395 LINC01780-201ENST00000420059 442 ntTSL 2 BASIC4.36□□□□□ -1.71
PRPF3O43395 AL591419.1-201ENST00000427423 339 ntBASIC4.36□□□□□ -1.71
PRPF3O43395 ISCA1P6-201ENST00000427740 390 ntBASIC4.36□□□□□ -1.71
PRPF3O43395 AC133104.1-201ENST00000429100 218 ntBASIC4.36□□□□□ -1.71
PRPF3O43395 IGKV1OR9-2-201ENST00000431378 277 ntBASIC4.36□□□□□ -1.71
PRPF3O43395 RPL36AP6-201ENST00000435770 321 ntBASIC4.36□□□□□ -1.71
PRPF3O43395 CYCSP43-201ENST00000438233 310 ntBASIC4.36□□□□□ -1.71
PRPF3O43395 AF228730.2-201ENST00000438784 848 ntBASIC4.36□□□□□ -1.71
PRPF3O43395 AC079781.2-201ENST00000446424 169 ntBASIC4.36□□□□□ -1.71
PRPF3O43395 AC006480.1-201ENST00000449887 378 ntBASIC4.36□□□□□ -1.71
PRPF3O43395 NANOGP10-201ENST00000453325 895 ntBASIC4.36□□□□□ -1.71
PRPF3O43395 AC022364.2-201ENST00000457963 554 ntBASIC4.36□□□□□ -1.71
PRPF3O43395 RPS3AP17-201ENST00000472594 777 ntBASIC4.36□□□□□ -1.71
PRPF3O43395 AC106872.2-201ENST00000494303 480 ntBASIC4.36□□□□□ -1.71
PRPF3O43395 NIPA2P2-201ENST00000496376 1083 ntBASIC4.36□□□□□ -1.71
PRPF3O43395 AL358832.1-201ENST00000497800 389 ntBASIC4.36□□□□□ -1.71
PRPF3O43395 HMGB1P29-201ENST00000505659 499 ntBASIC4.36□□□□□ -1.71
PRPF3O43395 MTND2P33-201ENST00000506452 1031 ntBASIC4.36□□□□□ -1.71
PRPF3O43395 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC4.36□□□□□ -1.71
PRPF3O43395 AC097460.1-201ENST00000514624 590 ntTSL 3 BASIC4.36□□□□□ -1.71
PRPF3O43395 MIR2114-201ENST00000516645 80 ntBASIC4.36□□□□□ -1.71
PRPF3O43395 RNA5SP309-201ENST00000516670 106 ntBASIC4.36□□□□□ -1.71
PRPF3O43395 CCNG2P1-201ENST00000549521 1000 ntBASIC4.36□□□□□ -1.71
PRPF3O43395 AC007424.1-203ENST00000554613 687 ntBASIC4.36□□□□□ -1.71
PRPF3O43395 AC004147.3-201ENST00000577709 375 ntTSL 3 BASIC4.36□□□□□ -1.71
PRPF3O43395 BNIP3P22-201ENST00000593399 556 ntBASIC4.36□□□□□ -1.71
PRPF3O43395 AL049634.3-201ENST00000604968 457 ntBASIC4.36□□□□□ -1.71
PRPF3O43395 BRDTP1-201ENST00000605735 677 ntBASIC4.36□□□□□ -1.71
PRPF3O43395 AC005344.1-201ENST00000613391 459 ntBASIC4.36□□□□□ -1.71
PRPF3O43395 SDR42E1P2-201ENST00000614861 481 ntBASIC4.36□□□□□ -1.71
PRPF3O43395 AC004825.2-201ENST00000616634 455 ntBASIC4.36□□□□□ -1.71
PRPF3O43395 LINC02033-202ENST00000623312 492 ntTSL 3 BASIC4.36□□□□□ -1.71
PRPF3O43395 RMDN2-AS1-204ENST00000626669 448 ntTSL 5 BASIC4.36□□□□□ -1.71
PRPF3O43395 TEX41-265ENST00000627785 704 ntTSL 5 BASIC4.36□□□□□ -1.71
PRPF3O43395 SPTY2D1-AS1-205ENST00000635674 450 ntAPPRIS ALT2 TSL 2 BASIC4.36□□□□□ -1.71
PRPF3O43395 MARCH6-215ENST00000640713 231 ntTSL 5 BASIC4.36□□□□□ -1.71
PRPF3O43395 TAX1BP1-213ENST00000543117 3365 ntAPPRIS ALT2 TSL 2 BASIC4.36□□□□□ -1.71
PRPF3O43395 RTKN2-201ENST00000315289 2383 ntTSL 2 BASIC4.36□□□□□ -1.71
PRPF3O43395 AC002546.1-201ENST00000588041 2504 ntBASIC4.36□□□□□ -1.71
PRPF3O43395 XIRP2-204ENST00000409273 12269 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
PRPF3O43395 PHF20L1-210ENST00000395390 5900 ntTSL 5 BASIC4.35□□□□□ -1.71
PRPF3O43395 AC008505.1-204ENST00000637363 2714 ntTSL 5 BASIC4.35□□□□□ -1.71
PRPF3O43395 UBE3A-202ENST00000397954 2873 ntTSL 5 BASIC4.35□□□□□ -1.71
PRPF3O43395 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC4.35□□□□□ -1.71
PRPF3O43395 Y_RNA.3-201ENST00000362331 103 ntBASIC4.35□□□□□ -1.71
PRPF3O43395 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
PRPF3O43395 HMGN2P8-201ENST00000391458 268 ntBASIC4.35□□□□□ -1.71
PRPF3O43395 LGALS16-201ENST00000392051 624 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
PRPF3O43395 RN7SKP156-201ENST00000410308 342 ntBASIC4.35□□□□□ -1.71
PRPF3O43395 AL158839.1-201ENST00000413943 575 ntTSL 2 BASIC4.35□□□□□ -1.71
PRPF3O43395 AL139247.1-201ENST00000422768 325 ntBASIC4.35□□□□□ -1.71
PRPF3O43395 AC008850.1-201ENST00000427546 362 ntBASIC4.35□□□□□ -1.71
PRPF3O43395 RPL7P2-201ENST00000427639 268 ntBASIC4.35□□□□□ -1.71
PRPF3O43395 TIMM9P3-201ENST00000428659 274 ntBASIC4.35□□□□□ -1.71
PRPF3O43395 MTND1P1-201ENST00000445453 368 ntBASIC4.35□□□□□ -1.71
PRPF3O43395 AP000477.2-201ENST00000447405 778 ntTSL 3 BASIC4.35□□□□□ -1.71
PRPF3O43395 AC140076.1-201ENST00000449897 361 ntBASIC4.35□□□□□ -1.71
PRPF3O43395 AC107401.1-201ENST00000503426 685 ntBASIC4.35□□□□□ -1.71
PRPF3O43395 AC082650.1-201ENST00000503542 575 ntTSL 4 BASIC4.35□□□□□ -1.71
PRPF3O43395 RN7SKP244-201ENST00000516513 307 ntBASIC4.35□□□□□ -1.71
PRPF3O43395 RNU7-51P-201ENST00000516560 62 ntBASIC4.35□□□□□ -1.71
PRPF3O43395 AC104233.2-201ENST00000518922 414 ntTSL 3 BASIC4.35□□□□□ -1.71
PRPF3O43395 AC087672.2-201ENST00000522498 429 ntTSL 2 BASIC4.35□□□□□ -1.71
PRPF3O43395 AC123904.3-201ENST00000547218 814 ntBASIC4.35□□□□□ -1.71
PRPF3O43395 IGKV2OR2-8-201ENST00000558710 300 ntBASIC4.35□□□□□ -1.71
PRPF3O43395 RPL21P12-201ENST00000559810 515 ntBASIC4.35□□□□□ -1.71
PRPF3O43395 AC006960.3-201ENST00000561845 705 ntBASIC4.35□□□□□ -1.71
PRPF3O43395 AC009063.1-201ENST00000563342 702 ntBASIC4.35□□□□□ -1.71
PRPF3O43395 AC055876.1-202ENST00000567053 138 ntBASIC4.35□□□□□ -1.71
PRPF3O43395 AC009145.3-201ENST00000567386 476 ntTSL 3 BASIC4.35□□□□□ -1.71
PRPF3O43395 AC025272.1-201ENST00000569661 483 ntTSL 2 BASIC4.35□□□□□ -1.71
PRPF3O43395 AC103987.2-201ENST00000583436 417 ntTSL 2 BASIC4.35□□□□□ -1.71
PRPF3O43395 AC093227.2-201ENST00000589357 285 ntBASIC4.35□□□□□ -1.71
PRPF3O43395 AP001172.2-201ENST00000602454 467 ntTSL 5 BASIC4.35□□□□□ -1.71
PRPF3O43395 AL592295.2-201ENST00000612578 206 ntBASIC4.35□□□□□ -1.71
PRPF3O43395 AC026585.1-201ENST00000619582 524 ntBASIC4.35□□□□□ -1.71
PRPF3O43395 AC091905.1-201ENST00000624400 311 ntBASIC4.35□□□□□ -1.71
PRPF3O43395 C6orf10-209ENST00000612031 2179 ntAPPRIS ALT2 TSL 5 BASIC4.35□□□□□ -1.71
PRPF3O43395 CDH10-201ENST00000264463 3438 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 99.4 ms