Protein–RNA interactions for Protein: O43364

HOXA2, Homeobox protein Hox-A2, humanhuman

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA2O43364 LINC01206-204ENST00000482787 9580 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
HOXA2O43364 FLG2-201ENST00000388718 9124 ntAPPRIS P1 TSL 5 BASIC5.98□□□□□ -1.45
HOXA2O43364 RRP15-201ENST00000366932 7771 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
HOXA2O43364 AC016705.1-201ENST00000548231 1891 ntTSL 5 BASIC5.98□□□□□ -1.45
HOXA2O43364 NXT2-201ENST00000218004 2692 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
HOXA2O43364 ADH4-207ENST00000505590 1400 ntTSL 5 BASIC5.98□□□□□ -1.45
HOXA2O43364 FILIP1-203ENST00000393004 7807 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
HOXA2O43364 ZEB1-219ENST00000560721 3368 ntAPPRIS ALT2 TSL 2 BASIC5.98□□□□□ -1.45
HOXA2O43364 NELL2-201ENST00000333837 2943 ntTSL 2 BASIC5.98□□□□□ -1.45
HOXA2O43364 RPGRIP1L-212ENST00000621565 6038 ntAPPRIS ALT1 TSL 1 (best) BASIC5.98□□□□□ -1.45
HOXA2O43364 VCAN-203ENST00000343200 9455 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
HOXA2O43364 SAGE2P-201ENST00000420011 2126 ntBASIC5.98□□□□□ -1.45
HOXA2O43364 AL672167.1-205ENST00000641112 3080 ntBASIC5.97□□□□□ -1.45
HOXA2O43364 ZNF334-203ENST00000593880 2635 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
HOXA2O43364 CUL2-201ENST00000374746 3903 ntTSL 5 BASIC5.97□□□□□ -1.45
HOXA2O43364 SLC1A2-203ENST00000395753 11689 ntAPPRIS ALT1 TSL 2 BASIC5.97□□□□□ -1.45
HOXA2O43364 SRPK2-201ENST00000357311 3700 ntAPPRIS P3 TSL 1 (best) BASIC5.97□□□□□ -1.45
HOXA2O43364 TMEM68-209ENST00000521229 2400 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
HOXA2O43364 PSD3-204ENST00000440756 11690 ntAPPRIS ALT2 TSL 5 BASIC5.97□□□□□ -1.45
HOXA2O43364 TDRD5-202ENST00000367614 3632 ntAPPRIS P3 TSL 2 BASIC5.97□□□□□ -1.45
HOXA2O43364 BRCA1-203ENST00000357654 7094 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
HOXA2O43364 TYW3-201ENST00000370867 3430 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
HOXA2O43364 NOL4-202ENST00000535384 1853 ntTSL 2 BASIC5.97□□□□□ -1.45
HOXA2O43364 ZNF33A-202ENST00000374618 6122 ntTSL 4 BASIC5.97□□□□□ -1.45
HOXA2O43364 Y_RNA.143-201ENST00000363520 106 ntBASIC5.97□□□□□ -1.45
HOXA2O43364 DEFB136-201ENST00000382209 237 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
HOXA2O43364 MIR765-201ENST00000390226 114 ntBASIC5.97□□□□□ -1.45
HOXA2O43364 TRAV21-201ENST00000390449 343 ntAPPRIS P1 BASIC5.97□□□□□ -1.45
HOXA2O43364 RPL21P75-201ENST00000396599 483 ntBASIC5.97□□□□□ -1.45
HOXA2O43364 RPL21P28-201ENST00000401418 483 ntBASIC5.97□□□□□ -1.45
HOXA2O43364 RNU4-78P-201ENST00000410940 126 ntBASIC5.97□□□□□ -1.45
HOXA2O43364 AL451074.5-201ENST00000415894 435 ntBASIC5.97□□□□□ -1.45
HOXA2O43364 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC5.97□□□□□ -1.45
HOXA2O43364 AL590556.1-201ENST00000423231 483 ntBASIC5.97□□□□□ -1.45
HOXA2O43364 AL451062.2-201ENST00000427515 271 ntBASIC5.97□□□□□ -1.45
HOXA2O43364 RPL21P11-201ENST00000461458 483 ntBASIC5.97□□□□□ -1.45
HOXA2O43364 RPL21P39-201ENST00000463605 483 ntBASIC5.97□□□□□ -1.45
HOXA2O43364 AC026316.2-201ENST00000473110 263 ntTSL 3 BASIC5.97□□□□□ -1.45
HOXA2O43364 RN7SL826P-201ENST00000479724 288 ntBASIC5.97□□□□□ -1.45
HOXA2O43364 AC093270.2-201ENST00000486157 792 ntBASIC5.97□□□□□ -1.45
HOXA2O43364 AC132942.1-201ENST00000486753 483 ntBASIC5.97□□□□□ -1.45
HOXA2O43364 AC093591.1-201ENST00000491435 481 ntBASIC5.97□□□□□ -1.45
HOXA2O43364 RPL21P16-201ENST00000495531 483 ntBASIC5.97□□□□□ -1.45
HOXA2O43364 AC008953.1-201ENST00000497334 318 ntBASIC5.97□□□□□ -1.45
HOXA2O43364 RNU6-143P-201ENST00000516942 93 ntBASIC5.97□□□□□ -1.45
HOXA2O43364 AC010186.2-204ENST00000537668 439 ntBASIC5.97□□□□□ -1.45
HOXA2O43364 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC5.97□□□□□ -1.45
HOXA2O43364 AC006272.2-201ENST00000594725 163 ntBASIC5.97□□□□□ -1.45
HOXA2O43364 AC009318.2-201ENST00000610917 651 ntBASIC5.97□□□□□ -1.45
HOXA2O43364 AC034102.8-201ENST00000615146 484 ntBASIC5.97□□□□□ -1.45
HOXA2O43364 SNHG5-214ENST00000623001 598 ntTSL 2 BASIC5.97□□□□□ -1.45
HOXA2O43364 PCDH15-207ENST00000395430 7002 ntTSL 5 BASIC5.97□□□□□ -1.45
HOXA2O43364 CPNE8-202ENST00000360449 1757 ntAPPRIS ALT2 TSL 2 BASIC5.97□□□□□ -1.45
HOXA2O43364 AC007159.1-201ENST00000566529 4706 ntBASIC5.97□□□□□ -1.45
HOXA2O43364 RAB30-212ENST00000533486 9929 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
HOXA2O43364 MUC7-201ENST00000304887 2443 ntAPPRIS P2 TSL 1 (best) BASIC5.97□□□□□ -1.45
HOXA2O43364 ALKBH8-205ENST00000428149 4079 ntAPPRIS P3 TSL 1 (best) BASIC5.97□□□□□ -1.45
HOXA2O43364 ZNF883-201ENST00000619044 2051 ntAPPRIS P1 TSL 5 BASIC5.97□□□□□ -1.45
HOXA2O43364 PTPRD-214ENST00000540109 6210 ntAPPRIS P1 TSL 5 BASIC5.97□□□□□ -1.45
HOXA2O43364 CYP3A43-204ENST00000354829 1709 ntAPPRIS ALT1 TSL 1 (best) BASIC5.96□□□□□ -1.45
HOXA2O43364 CAPRIN2-203ENST00000417045 3535 ntTSL 1 (best) BASIC5.96□□□□□ -1.45
HOXA2O43364 GALNT11-203ENST00000422997 2371 ntTSL 5 BASIC5.96□□□□□ -1.45
HOXA2O43364 CAB39L-206ENST00000410043 1627 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.45
HOXA2O43364 OR5A2-203ENST00000641673 9444 ntAPPRIS P1 BASIC5.96□□□□□ -1.45
HOXA2O43364 RNA5SP52-201ENST00000362448 134 ntBASIC5.96□□□□□ -1.46
HOXA2O43364 RNU6-682P-201ENST00000363843 106 ntBASIC5.96□□□□□ -1.46
HOXA2O43364 RNY3P4-201ENST00000384428 101 ntBASIC5.96□□□□□ -1.46
HOXA2O43364 MIR190B-201ENST00000401119 79 ntBASIC5.96□□□□□ -1.46
HOXA2O43364 RNU4-64P-201ENST00000410795 131 ntBASIC5.96□□□□□ -1.46
HOXA2O43364 SRGAP3-AS1-201ENST00000414633 428 ntTSL 2 BASIC5.96□□□□□ -1.46
HOXA2O43364 COX6CP10-201ENST00000416832 224 ntBASIC5.96□□□□□ -1.46
HOXA2O43364 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC5.96□□□□□ -1.46
HOXA2O43364 TMEM167AP1-201ENST00000423409 219 ntBASIC5.96□□□□□ -1.46
HOXA2O43364 AC093655.2-201ENST00000425735 631 ntBASIC5.96□□□□□ -1.46
HOXA2O43364 AL592045.1-201ENST00000429867 352 ntBASIC5.96□□□□□ -1.46
HOXA2O43364 RPL7AP6-201ENST00000477943 801 ntBASIC5.96□□□□□ -1.46
HOXA2O43364 COX6B1P2-201ENST00000489624 230 ntBASIC5.96□□□□□ -1.46
HOXA2O43364 AC016651.1-201ENST00000502680 822 ntTSL 3 BASIC5.96□□□□□ -1.46
HOXA2O43364 SUMO2P6-201ENST00000505273 288 ntBASIC5.96□□□□□ -1.46
HOXA2O43364 SEPT14P8-201ENST00000508026 178 ntBASIC5.96□□□□□ -1.46
HOXA2O43364 RNU6-1315P-201ENST00000517187 99 ntBASIC5.96□□□□□ -1.46
HOXA2O43364 TRAPPC2P2-201ENST00000517589 409 ntBASIC5.96□□□□□ -1.46
HOXA2O43364 AP006245.2-201ENST00000522004 300 ntBASIC5.96□□□□□ -1.46
HOXA2O43364 AP002833.1-201ENST00000530572 566 ntTSL 3 BASIC5.96□□□□□ -1.46
HOXA2O43364 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC5.96□□□□□ -1.46
HOXA2O43364 AC004024.1-201ENST00000549244 247 ntBASIC5.96□□□□□ -1.46
HOXA2O43364 AC039056.1-201ENST00000552704 467 ntTSL 3 BASIC5.96□□□□□ -1.46
HOXA2O43364 MIR4512-201ENST00000583257 77 ntBASIC5.96□□□□□ -1.46
HOXA2O43364 AC004832.4-201ENST00000608952 331 ntBASIC5.96□□□□□ -1.46
HOXA2O43364 PACRG-210ENST00000611387 279 ntTSL 5 BASIC5.96□□□□□ -1.46
HOXA2O43364 LINC01232-201ENST00000625254 836 ntTSL 5 BASIC5.96□□□□□ -1.46
HOXA2O43364 LINC00906-206ENST00000589921 3444 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
HOXA2O43364 ARPP19-208ENST00000566423 5362 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
HOXA2O43364 FBXO3-208ENST00000530401 7410 ntTSL 2 BASIC5.96□□□□□ -1.46
HOXA2O43364 FAM91A3P-201ENST00000456826 2544 ntBASIC5.96□□□□□ -1.46
HOXA2O43364 RNMT-201ENST00000262173 6051 ntAPPRIS P1 TSL 2 BASIC5.96□□□□□ -1.46
HOXA2O43364 VCAM1-201ENST00000294728 3083 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
HOXA2O43364 CASC1-202ENST00000354189 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC5.96□□□□□ -1.46
HOXA2O43364 CFH-201ENST00000359637 1454 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
HOXA2O43364 SGIP1-203ENST00000371037 7768 ntAPPRIS P3 TSL 1 (best) BASIC5.95□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 101.9 ms