Protein–RNA interactions for Protein: O00479

HMGN4, High mobility group nucleosome-binding domain-containing protein 4, humanhuman

Predictions only

Length 90 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN4O00479 AC008780.2-201ENST00000509844 820 ntTSL 2 BASIC1.43□□□□□ -2.18
HMGN4O00479 COMMD10-206ENST00000515539 869 ntTSL 3 BASIC1.43□□□□□ -2.18
HMGN4O00479 RNU6-1308P-201ENST00000516817 103 ntBASIC1.43□□□□□ -2.18
HMGN4O00479 AC103957.1-201ENST00000517681 503 ntTSL 3 BASIC1.43□□□□□ -2.18
HMGN4O00479 HMGB1P46-201ENST00000520062 610 ntBASIC1.43□□□□□ -2.18
HMGN4O00479 AC087272.1-201ENST00000523624 533 ntBASIC1.43□□□□□ -2.18
HMGN4O00479 AC073591.1-201ENST00000552736 597 ntTSL 3 BASIC1.43□□□□□ -2.18
HMGN4O00479 TRAV28-201ENST00000557548 323 ntBASIC1.43□□□□□ -2.18
HMGN4O00479 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC1.43□□□□□ -2.18
HMGN4O00479 MIR3945-201ENST00000581853 98 ntBASIC1.43□□□□□ -2.18
HMGN4O00479 AC135178.6-201ENST00000605314 398 ntBASIC1.43□□□□□ -2.18
HMGN4O00479 BNIP3P7-201ENST00000605641 516 ntBASIC1.43□□□□□ -2.18
HMGN4O00479 BX248123.2-201ENST00000606318 124 ntBASIC1.43□□□□□ -2.18
HMGN4O00479 HMGB1P24-202ENST00000615653 685 ntBASIC1.43□□□□□ -2.18
HMGN4O00479 AC012640.5-201ENST00000623897 319 ntBASIC1.43□□□□□ -2.18
HMGN4O00479 LINC02246-204ENST00000625278 740 ntTSL 5 BASIC1.43□□□□□ -2.18
HMGN4O00479 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC1.43□□□□□ -2.18
HMGN4O00479 AC008669.1-201ENST00000565823 2178 ntBASIC1.42□□□□□ -2.18
HMGN4O00479 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC1.42□□□□□ -2.18
HMGN4O00479 SPAM1-205ENST00000439500 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC1.42□□□□□ -2.18
HMGN4O00479 RNU6-185P-201ENST00000384421 107 ntBASIC1.42□□□□□ -2.18
HMGN4O00479 MIR23A-201ENST00000385245 73 ntBASIC1.42□□□□□ -2.18
HMGN4O00479 AL513475.1-201ENST00000406602 315 ntBASIC1.42□□□□□ -2.18
HMGN4O00479 AL445183.3-201ENST00000414168 502 ntBASIC1.42□□□□□ -2.18
HMGN4O00479 AC133106.1-201ENST00000419029 397 ntTSL 3 BASIC1.42□□□□□ -2.18
HMGN4O00479 OR4K11P-201ENST00000431829 904 ntBASIC1.42□□□□□ -2.18
HMGN4O00479 AC007557.1-201ENST00000451711 541 ntTSL 2 BASIC1.42□□□□□ -2.18
HMGN4O00479 RPL23AP42-201ENST00000471152 471 ntBASIC1.42□□□□□ -2.18
HMGN4O00479 RPL7P18-201ENST00000478965 734 ntBASIC1.42□□□□□ -2.18
HMGN4O00479 MIR514B-201ENST00000516774 80 ntBASIC1.42□□□□□ -2.18
HMGN4O00479 SMILR-201ENST00000533992 553 ntTSL 4 BASIC1.42□□□□□ -2.18
HMGN4O00479 AC016382.1-201ENST00000583580 387 ntTSL 3 BASIC1.42□□□□□ -2.18
HMGN4O00479 LINC01515-204ENST00000595269 402 ntTSL 5 BASIC1.42□□□□□ -2.18
HMGN4O00479 ZNF788-206ENST00000596883 692 ntTSL 3 BASIC1.42□□□□□ -2.18
HMGN4O00479 HSPE1P7-201ENST00000604681 321 ntBASIC1.42□□□□□ -2.18
HMGN4O00479 AL031601.2-202ENST00000622650 282 ntBASIC1.42□□□□□ -2.18
HMGN4O00479 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC1.42□□□□□ -2.18
HMGN4O00479 ANKRD20A9P-201ENST00000457997 2978 ntBASIC1.42□□□□□ -2.18
HMGN4O00479 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC1.42□□□□□ -2.18
HMGN4O00479 EVI2A-201ENST00000247270 1860 ntAPPRIS P3 TSL 2 BASIC1.41□□□□□ -2.18
HMGN4O00479 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC1.41□□□□□ -2.18
HMGN4O00479 CFHR4-204ENST00000608469 1601 ntTSL 1 (best) BASIC1.41□□□□□ -2.18
HMGN4O00479 TRIQK-212ENST00000520686 1808 ntAPPRIS P1 TSL 1 (best) BASIC1.41□□□□□ -2.18
HMGN4O00479 HMGB1P5-201ENST00000255320 642 ntBASIC1.41□□□□□ -2.18
HMGN4O00479 LINC01967-201ENST00000356047 755 ntTSL 5 BASIC1.41□□□□□ -2.18
HMGN4O00479 MIR1323-201ENST00000408090 73 ntBASIC1.41□□□□□ -2.18
HMGN4O00479 MIR1304-201ENST00000408243 91 ntBASIC1.41□□□□□ -2.18
HMGN4O00479 MIR1289-2-201ENST00000408360 111 ntBASIC1.41□□□□□ -2.18
HMGN4O00479 AL356379.1-201ENST00000414105 126 ntBASIC1.41□□□□□ -2.18
HMGN4O00479 MTCO3P12-201ENST00000416718 547 ntBASIC1.41□□□□□ -2.18
HMGN4O00479 LANCL1-AS1-203ENST00000433296 864 ntTSL 2 BASIC1.41□□□□□ -2.18
HMGN4O00479 UBE2FP3-201ENST00000436366 524 ntBASIC1.41□□□□□ -2.18
HMGN4O00479 IFNA20P-201ENST00000436840 528 ntBASIC1.41□□□□□ -2.18
HMGN4O00479 AL645638.1-201ENST00000440519 361 ntBASIC1.41□□□□□ -2.18
HMGN4O00479 RPL7P12-201ENST00000446719 750 ntBASIC1.41□□□□□ -2.18
HMGN4O00479 AL513124.1-201ENST00000450410 614 ntBASIC1.41□□□□□ -2.18
HMGN4O00479 SNRPGP6-201ENST00000451124 220 ntBASIC1.41□□□□□ -2.18
HMGN4O00479 HMGB1P26-201ENST00000452520 628 ntBASIC1.41□□□□□ -2.18
HMGN4O00479 KLRA1P-201ENST00000503499 986 ntBASIC1.41□□□□□ -2.18
HMGN4O00479 LINC02118-201ENST00000505899 407 ntTSL 3 BASIC1.41□□□□□ -2.18
HMGN4O00479 AC133963.2-201ENST00000513686 578 ntBASIC1.41□□□□□ -2.18
HMGN4O00479 LIAS-206ENST00000513731 826 ntTSL 5 BASIC1.41□□□□□ -2.18
HMGN4O00479 SNORA31.8-201ENST00000516327 108 ntBASIC1.41□□□□□ -2.18
HMGN4O00479 SNORA31.23-201ENST00000517219 133 ntBASIC1.41□□□□□ -2.18
HMGN4O00479 AP003469.3-201ENST00000518090 473 ntTSL 3 BASIC1.41□□□□□ -2.18
HMGN4O00479 AP000873.5-201ENST00000533906 236 ntBASIC1.41□□□□□ -2.18
HMGN4O00479 RRAS2-210ENST00000534746 993 ntTSL 2 BASIC1.41□□□□□ -2.18
HMGN4O00479 AC018630.1-201ENST00000541376 925 ntBASIC1.41□□□□□ -2.18
HMGN4O00479 LINC02460-201ENST00000543558 536 ntTSL 4 BASIC1.41□□□□□ -2.18
HMGN4O00479 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC1.41□□□□□ -2.18
HMGN4O00479 AC010546.1-201ENST00000569391 485 ntBASIC1.41□□□□□ -2.18
HMGN4O00479 AC025811.1-201ENST00000604312 472 ntBASIC1.41□□□□□ -2.18
HMGN4O00479 AL009028.1-201ENST00000604895 802 ntBASIC1.41□□□□□ -2.18
HMGN4O00479 AL355810.1-201ENST00000614629 552 ntBASIC1.41□□□□□ -2.18
HMGN4O00479 PISRT1-201ENST00000626175 531 ntBASIC1.41□□□□□ -2.18
HMGN4O00479 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC1.41□□□□□ -2.18
HMGN4O00479 MTND5P28-201ENST00000438005 1594 ntBASIC1.41□□□□□ -2.18
HMGN4O00479 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC1.41□□□□□ -2.18
HMGN4O00479 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC1.4□□□□□ -2.18
HMGN4O00479 AC103993.1-201ENST00000521500 1584 ntTSL 5 BASIC1.4□□□□□ -2.19
HMGN4O00479 MT-ND4L-201ENST00000361335 297 ntAPPRIS P1 BASIC1.4□□□□□ -2.19
HMGN4O00479 AP002784.2-201ENST00000397300 549 ntBASIC1.4□□□□□ -2.19
HMGN4O00479 SNRPEP2-201ENST00000397592 279 ntBASIC1.4□□□□□ -2.19
HMGN4O00479 SFR1P1-201ENST00000403720 688 ntBASIC1.4□□□□□ -2.19
HMGN4O00479 RPS20P15-201ENST00000412792 311 ntBASIC1.4□□□□□ -2.19
HMGN4O00479 AC233981.1-201ENST00000423224 461 ntBASIC1.4□□□□□ -2.19
HMGN4O00479 OOSP1P1-201ENST00000423265 274 ntBASIC1.4□□□□□ -2.19
HMGN4O00479 AC007566.1-201ENST00000427458 643 ntTSL 5 BASIC1.4□□□□□ -2.19
HMGN4O00479 LINC01078-201ENST00000434832 387 ntTSL 5 BASIC1.4□□□□□ -2.19
HMGN4O00479 LPP-AS1-201ENST00000434996 494 ntTSL 3 BASIC1.4□□□□□ -2.19
HMGN4O00479 UBE2V1P13-201ENST00000436983 439 ntBASIC1.4□□□□□ -2.19
HMGN4O00479 GACAT1-202ENST00000441383 540 ntTSL 4 BASIC1.4□□□□□ -2.19
HMGN4O00479 RNF2P1-201ENST00000442955 1010 ntBASIC1.4□□□□□ -2.19
HMGN4O00479 COX6CP12-201ENST00000446748 202 ntBASIC1.4□□□□□ -2.19
HMGN4O00479 RNU7-26P-201ENST00000458980 63 ntBASIC1.4□□□□□ -2.19
HMGN4O00479 AC023790.1-201ENST00000482174 347 ntBASIC1.4□□□□□ -2.19
HMGN4O00479 AC111000.5-201ENST00000506559 1178 ntBASIC1.4□□□□□ -2.19
HMGN4O00479 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC1.4□□□□□ -2.19
HMGN4O00479 AC090739.1-201ENST00000522190 708 ntTSL 3 BASIC1.4□□□□□ -2.19
HMGN4O00479 ASPH-224ENST00000522603 842 ntTSL 1 (best) BASIC1.4□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 111.8 ms