Protein–RNA interactions for Protein: E9PL57

NEDD8-MDP1, NEDD8-MDP1 readthrough (Fragment), humanhuman

Predictions only

Length 170 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-MDP1E9PL57 MIR6852-201ENST00000621699 66 ntBASIC3.08□□□□□ -1.92
NEDD8-MDP1E9PL57 BIRC6-AS2-201ENST00000623382 589 ntTSL 2 BASIC3.08□□□□□ -1.92
NEDD8-MDP1E9PL57 AP003485.2-201ENST00000623636 610 ntBASIC3.08□□□□□ -1.92
NEDD8-MDP1E9PL57 AC097520.1-201ENST00000624435 385 ntBASIC3.08□□□□□ -1.92
NEDD8-MDP1E9PL57 AC019226.2-201ENST00000625973 424 ntBASIC3.08□□□□□ -1.92
NEDD8-MDP1E9PL57 AL391597.2-201ENST00000635698 479 ntTSL 5 BASIC3.08□□□□□ -1.92
NEDD8-MDP1E9PL57 TIGD2-201ENST00000317005 2083 ntAPPRIS P1 BASIC3.08□□□□□ -1.92
NEDD8-MDP1E9PL57 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC3.08□□□□□ -1.92
NEDD8-MDP1E9PL57 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
NEDD8-MDP1E9PL57 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC3.08□□□□□ -1.92
NEDD8-MDP1E9PL57 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC3.07□□□□□ -1.92
NEDD8-MDP1E9PL57 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
NEDD8-MDP1E9PL57 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
NEDD8-MDP1E9PL57 SNORA5B-201ENST00000363786 132 ntBASIC3.07□□□□□ -1.92
NEDD8-MDP1E9PL57 RNA5SP88-201ENST00000365560 109 ntBASIC3.07□□□□□ -1.92
NEDD8-MDP1E9PL57 RNU6-1181P-201ENST00000384191 106 ntBASIC3.07□□□□□ -1.92
NEDD8-MDP1E9PL57 AC083875.1-201ENST00000419509 405 ntBASIC3.07□□□□□ -1.92
NEDD8-MDP1E9PL57 NBDY-202ENST00000423617 543 ntAPPRIS P1 TSL 2 BASIC3.07□□□□□ -1.92
NEDD8-MDP1E9PL57 DUTP6-201ENST00000425573 462 ntBASIC3.07□□□□□ -1.92
NEDD8-MDP1E9PL57 AL445669.1-201ENST00000426743 755 ntBASIC3.07□□□□□ -1.92
NEDD8-MDP1E9PL57 AC003084.1-201ENST00000427030 435 ntTSL 5 BASIC3.07□□□□□ -1.92
NEDD8-MDP1E9PL57 AL139132.1-201ENST00000431587 344 ntBASIC3.07□□□□□ -1.92
NEDD8-MDP1E9PL57 LSM1P1-201ENST00000438629 273 ntBASIC3.07□□□□□ -1.92
NEDD8-MDP1E9PL57 RPS12P18-201ENST00000442381 270 ntBASIC3.07□□□□□ -1.92
NEDD8-MDP1E9PL57 MYCBP2-AS1-202ENST00000448470 333 ntTSL 3 BASIC3.07□□□□□ -1.92
NEDD8-MDP1E9PL57 FGF14-AS1-202ENST00000451630 321 ntTSL 2 BASIC3.07□□□□□ -1.92
NEDD8-MDP1E9PL57 SLC16A12-AS1-202ENST00000454270 478 ntTSL 2 BASIC3.07□□□□□ -1.92
NEDD8-MDP1E9PL57 ATG12P2-201ENST00000456830 416 ntBASIC3.07□□□□□ -1.92
NEDD8-MDP1E9PL57 RPL30P9-201ENST00000465586 330 ntBASIC3.07□□□□□ -1.92
NEDD8-MDP1E9PL57 LINC00888-204ENST00000487386 421 ntBASIC3.07□□□□□ -1.92
NEDD8-MDP1E9PL57 FAM172BP-201ENST00000487497 1089 ntBASIC3.07□□□□□ -1.92
NEDD8-MDP1E9PL57 AL024509.2-201ENST00000493462 493 ntBASIC3.07□□□□□ -1.92
NEDD8-MDP1E9PL57 KCTD9P5-201ENST00000504141 1170 ntBASIC3.07□□□□□ -1.92
NEDD8-MDP1E9PL57 AC114967.1-201ENST00000504890 259 ntBASIC3.07□□□□□ -1.92
NEDD8-MDP1E9PL57 AC093809.1-201ENST00000509155 340 ntBASIC3.07□□□□□ -1.92
NEDD8-MDP1E9PL57 AC024589.1-201ENST00000512207 263 ntBASIC3.07□□□□□ -1.92
NEDD8-MDP1E9PL57 LINC02484-201ENST00000513843 546 ntTSL 5 BASIC3.07□□□□□ -1.92
NEDD8-MDP1E9PL57 AC106744.2-202ENST00000515123 448 ntTSL 3 BASIC3.07□□□□□ -1.92
NEDD8-MDP1E9PL57 SCGB1D5P-201ENST00000515134 247 ntBASIC3.07□□□□□ -1.92
NEDD8-MDP1E9PL57 RNA5SP216-201ENST00000516111 123 ntBASIC3.07□□□□□ -1.92
NEDD8-MDP1E9PL57 RNU6-714P-201ENST00000516963 103 ntBASIC3.07□□□□□ -1.92
NEDD8-MDP1E9PL57 AC104027.1-201ENST00000521887 300 ntBASIC3.07□□□□□ -1.92
NEDD8-MDP1E9PL57 AC087276.1-201ENST00000529659 480 ntBASIC3.07□□□□□ -1.92
NEDD8-MDP1E9PL57 CCDC179-202ENST00000532798 791 ntAPPRIS P1 TSL 2 BASIC3.07□□□□□ -1.92
NEDD8-MDP1E9PL57 AL163153.1-201ENST00000554223 283 ntBASIC3.07□□□□□ -1.92
NEDD8-MDP1E9PL57 LINC02345-201ENST00000557883 766 ntTSL 3 BASIC3.07□□□□□ -1.92
NEDD8-MDP1E9PL57 AC037487.2-201ENST00000581796 537 ntTSL 3 BASIC3.07□□□□□ -1.92
NEDD8-MDP1E9PL57 DUXAP11-201ENST00000603858 526 ntBASIC3.07□□□□□ -1.92
NEDD8-MDP1E9PL57 AC007671.2-201ENST00000637344 619 ntBASIC3.07□□□□□ -1.92
NEDD8-MDP1E9PL57 ZNF736P9Y-201ENST00000439586 1345 ntBASIC3.07□□□□□ -1.92
NEDD8-MDP1E9PL57 NF1-214ENST00000490416 1329 ntTSL 3 BASIC3.07□□□□□ -1.92
NEDD8-MDP1E9PL57 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
NEDD8-MDP1E9PL57 FAM35CP-201ENST00000554755 2470 ntBASIC3.07□□□□□ -1.92
NEDD8-MDP1E9PL57 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC3.06□□□□□ -1.92
NEDD8-MDP1E9PL57 SNORA51.2-201ENST00000364595 132 ntBASIC3.06□□□□□ -1.92
NEDD8-MDP1E9PL57 RABGGTB-202ENST00000370826 512 ntTSL 2 BASIC3.06□□□□□ -1.92
NEDD8-MDP1E9PL57 RNU6-1074P-201ENST00000383995 104 ntBASIC3.06□□□□□ -1.92
NEDD8-MDP1E9PL57 Y_RNA.510-201ENST00000384511 114 ntBASIC3.06□□□□□ -1.92
NEDD8-MDP1E9PL57 MIR135A2-201ENST00000384854 100 ntBASIC3.06□□□□□ -1.92
NEDD8-MDP1E9PL57 RN7SKP266-201ENST00000410232 287 ntBASIC3.06□□□□□ -1.92
NEDD8-MDP1E9PL57 AL391704.1-203ENST00000414903 462 ntTSL 3 BASIC3.06□□□□□ -1.92
NEDD8-MDP1E9PL57 MTCO3P12-201ENST00000416718 547 ntBASIC3.06□□□□□ -1.92
NEDD8-MDP1E9PL57 AC017074.1-201ENST00000424612 561 ntTSL 3 BASIC3.06□□□□□ -1.92
NEDD8-MDP1E9PL57 MTCO1P39-201ENST00000426148 480 ntBASIC3.06□□□□□ -1.92
NEDD8-MDP1E9PL57 OR2B8P-201ENST00000432841 938 ntBASIC3.06□□□□□ -1.92
NEDD8-MDP1E9PL57 UBE2D3P1-201ENST00000436669 444 ntBASIC3.06□□□□□ -1.92
NEDD8-MDP1E9PL57 AL606534.3-201ENST00000437499 373 ntTSL 5 BASIC3.06□□□□□ -1.92
NEDD8-MDP1E9PL57 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC3.06□□□□□ -1.92
NEDD8-MDP1E9PL57 AC006483.1-201ENST00000487308 313 ntBASIC3.06□□□□□ -1.92
NEDD8-MDP1E9PL57 RN7SL20P-201ENST00000488827 297 ntBASIC3.06□□□□□ -1.92
NEDD8-MDP1E9PL57 KLHL6-AS1-201ENST00000491676 503 ntTSL 2 BASIC3.06□□□□□ -1.92
NEDD8-MDP1E9PL57 POU5F1P7-201ENST00000508759 541 ntBASIC3.06□□□□□ -1.92
NEDD8-MDP1E9PL57 MRPS33P3-201ENST00000513456 322 ntBASIC3.06□□□□□ -1.92
NEDD8-MDP1E9PL57 AHI1-212ENST00000528103 441 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
NEDD8-MDP1E9PL57 DEFB130C-201ENST00000528518 237 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
NEDD8-MDP1E9PL57 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
NEDD8-MDP1E9PL57 AL450442.1-201ENST00000554042 854 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
NEDD8-MDP1E9PL57 LINC02562-201ENST00000561705 785 ntTSL 2 BASIC3.06□□□□□ -1.92
NEDD8-MDP1E9PL57 SMG1P7-203ENST00000573141 619 ntTSL 2 BASIC3.06□□□□□ -1.92
NEDD8-MDP1E9PL57 ZNF28-207ENST00000594602 684 ntTSL 5 BASIC3.06□□□□□ -1.92
NEDD8-MDP1E9PL57 AC024563.1-202ENST00000597533 419 ntTSL 3 BASIC3.06□□□□□ -1.92
NEDD8-MDP1E9PL57 Metazoa_SRP.117-201ENST00000615106 292 ntBASIC3.06□□□□□ -1.92
NEDD8-MDP1E9PL57 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC3.06□□□□□ -1.92
NEDD8-MDP1E9PL57 AC007318.2-201ENST00000620999 243 ntBASIC3.06□□□□□ -1.92
NEDD8-MDP1E9PL57 AP000676.3-201ENST00000623299 569 ntBASIC3.06□□□□□ -1.92
NEDD8-MDP1E9PL57 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC3.06□□□□□ -1.92
NEDD8-MDP1E9PL57 LRRC39-201ENST00000342895 1881 ntAPPRIS P1 TSL 5 BASIC3.05□□□□□ -1.92
NEDD8-MDP1E9PL57 LIPJ-201ENST00000371939 1484 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
NEDD8-MDP1E9PL57 PDCL2-201ENST00000295645 861 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
NEDD8-MDP1E9PL57 AL161781.1-201ENST00000354277 403 ntBASIC3.05□□□□□ -1.92
NEDD8-MDP1E9PL57 RNU6-359P-201ENST00000365466 108 ntBASIC3.05□□□□□ -1.92
NEDD8-MDP1E9PL57 RNU6-744P-201ENST00000365557 107 ntBASIC3.05□□□□□ -1.92
NEDD8-MDP1E9PL57 DYNLT3P1-201ENST00000378574 347 ntBASIC3.05□□□□□ -1.92
NEDD8-MDP1E9PL57 RNU6-1316P-201ENST00000384242 108 ntBASIC3.05□□□□□ -1.92
NEDD8-MDP1E9PL57 TEX41-202ENST00000414256 604 ntTSL 5 BASIC3.05□□□□□ -1.92
NEDD8-MDP1E9PL57 AP000432.1-201ENST00000416641 516 ntTSL 3 BASIC3.05□□□□□ -1.92
NEDD8-MDP1E9PL57 LINC01065-201ENST00000417989 577 ntTSL 3 BASIC3.05□□□□□ -1.92
NEDD8-MDP1E9PL57 BX119904.4-201ENST00000424402 301 ntBASIC3.05□□□□□ -1.92
NEDD8-MDP1E9PL57 RPL21P66-201ENST00000426566 466 ntBASIC3.05□□□□□ -1.92
NEDD8-MDP1E9PL57 RSU1P2-202ENST00000437884 485 ntBASIC3.05□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 96.2 ms