Protein–RNA interactions for Protein: E7ERA6

RNF223, RING finger protein 223, humanhuman

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF223E7ERA6 CASC1-204ENST00000395990 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC5.2□□□□□ -1.58
RNF223E7ERA6 FBXW7-203ENST00000296555 3572 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
RNF223E7ERA6 TTC8-217ENST00000622513 5270 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
RNF223E7ERA6 FBXL13-204ENST00000436908 2577 ntTSL 5 BASIC5.2□□□□□ -1.58
RNF223E7ERA6 FAP-214ENST00000627638 2569 ntAPPRIS ALT1 TSL 5 BASIC5.2□□□□□ -1.58
RNF223E7ERA6 ZNF729-201ENST00000601693 3877 ntAPPRIS P1 TSL 2 BASIC5.2□□□□□ -1.58
RNF223E7ERA6 AC008957.3-201ENST00000624112 2242 ntBASIC5.2□□□□□ -1.58
RNF223E7ERA6 ZNF474-201ENST00000296600 1964 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
RNF223E7ERA6 PCDH18-201ENST00000344876 5906 ntAPPRIS P3 TSL 1 (best) BASIC5.2□□□□□ -1.58
RNF223E7ERA6 PIP5K1B-201ENST00000265382 2654 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
RNF223E7ERA6 SELE-203ENST00000367775 3389 ntTSL 5 BASIC5.19□□□□□ -1.58
RNF223E7ERA6 RASSF9-201ENST00000361228 5682 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
RNF223E7ERA6 PMFBP1-201ENST00000237353 3527 ntAPPRIS P2 TSL 1 (best) BASIC5.19□□□□□ -1.58
RNF223E7ERA6 KIAA2012-205ENST00000541917 3543 ntAPPRIS P2 TSL 5 BASIC5.19□□□□□ -1.58
RNF223E7ERA6 AL136531.3-201ENST00000624378 3658 ntBASIC5.19□□□□□ -1.58
RNF223E7ERA6 LINC01297-204ENST00000621052 4222 ntTSL 5 BASIC5.19□□□□□ -1.58
RNF223E7ERA6 DLC1-209ENST00000511869 2451 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
RNF223E7ERA6 DPYD-202ENST00000370192 4412 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
RNF223E7ERA6 SCYL3-201ENST00000367770 2916 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
RNF223E7ERA6 ZNF337-202ENST00000376436 3613 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
RNF223E7ERA6 GHR-211ENST00000618088 4491 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
RNF223E7ERA6 TBCK-205ENST00000432496 3362 ntAPPRIS P1 TSL 2 BASIC5.19□□□□□ -1.58
RNF223E7ERA6 AC069528.2-201ENST00000624849 1991 ntBASIC5.19□□□□□ -1.58
RNF223E7ERA6 DCX-207ENST00000635795 9163 ntAPPRIS P4 TSL 1 (best) BASIC5.19□□□□□ -1.58
RNF223E7ERA6 PRSS37-201ENST00000350549 1189 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
RNF223E7ERA6 RNU6-873P-201ENST00000363833 107 ntBASIC5.19□□□□□ -1.58
RNF223E7ERA6 RNU6-72P-201ENST00000384285 79 ntBASIC5.19□□□□□ -1.58
RNF223E7ERA6 Y_RNA.558-201ENST00000384685 113 ntBASIC5.19□□□□□ -1.58
RNF223E7ERA6 SNORA26.5-201ENST00000391215 123 ntBASIC5.19□□□□□ -1.58
RNF223E7ERA6 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
RNF223E7ERA6 Y_RNA.630-201ENST00000411370 108 ntBASIC5.19□□□□□ -1.58
RNF223E7ERA6 AL353748.1-201ENST00000440753 474 ntBASIC5.19□□□□□ -1.58
RNF223E7ERA6 AL691497.1-201ENST00000443270 449 ntTSL 2 BASIC5.19□□□□□ -1.58
RNF223E7ERA6 EIF4A1P11-201ENST00000451239 222 ntBASIC5.19□□□□□ -1.58
RNF223E7ERA6 AC245047.8-201ENST00000456455 284 ntBASIC5.19□□□□□ -1.58
RNF223E7ERA6 RN7SL193P-201ENST00000491708 276 ntBASIC5.19□□□□□ -1.58
RNF223E7ERA6 AC095057.1-201ENST00000507583 168 ntBASIC5.19□□□□□ -1.58
RNF223E7ERA6 TOMM22P4-201ENST00000511318 336 ntBASIC5.19□□□□□ -1.58
RNF223E7ERA6 RNU6-762P-201ENST00000517107 102 ntBASIC5.19□□□□□ -1.58
RNF223E7ERA6 WASHC5-AS1-201ENST00000519140 587 ntTSL 4 BASIC5.19□□□□□ -1.58
RNF223E7ERA6 AC027369.5-201ENST00000533838 755 ntBASIC5.19□□□□□ -1.58
RNF223E7ERA6 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC5.19□□□□□ -1.58
RNF223E7ERA6 AL390816.1-201ENST00000553990 322 ntTSL 3 BASIC5.19□□□□□ -1.58
RNF223E7ERA6 FXNP1-201ENST00000555153 337 ntBASIC5.19□□□□□ -1.58
RNF223E7ERA6 AC007225.2-201ENST00000562529 256 ntBASIC5.19□□□□□ -1.58
RNF223E7ERA6 AP005230.1-203ENST00000582086 887 ntTSL 2 BASIC5.19□□□□□ -1.58
RNF223E7ERA6 AL352984.2-201ENST00000611153 546 ntBASIC5.19□□□□□ -1.58
RNF223E7ERA6 AL445567.2-201ENST00000618935 498 ntBASIC5.19□□□□□ -1.58
RNF223E7ERA6 MIR7159-201ENST00000620587 66 ntBASIC5.19□□□□□ -1.58
RNF223E7ERA6 LINC01232-203ENST00000625369 576 ntTSL 4 BASIC5.19□□□□□ -1.58
RNF223E7ERA6 PCBP1-AS1-282ENST00000625783 826 ntTSL 5 BASIC5.19□□□□□ -1.58
RNF223E7ERA6 BTN3A2-201ENST00000356386 3017 ntAPPRIS P3 TSL 5 BASIC5.19□□□□□ -1.58
RNF223E7ERA6 ZNF410-202ENST00000334521 2193 ntTSL 5 BASIC5.19□□□□□ -1.58
RNF223E7ERA6 ZMYM4-201ENST00000314607 6994 ntAPPRIS P1 TSL 2 BASIC5.19□□□□□ -1.58
RNF223E7ERA6 MARCH1-202ENST00000339875 2476 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
RNF223E7ERA6 TOR1AIP2-201ENST00000367612 7905 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
RNF223E7ERA6 TRIQK-223ENST00000537541 3510 ntAPPRIS P1 TSL 3 BASIC5.19□□□□□ -1.58
RNF223E7ERA6 NBPF25P-202ENST00000619932 3827 ntTSL 2 BASIC5.19□□□□□ -1.58
RNF223E7ERA6 FRYL-209ENST00000506685 1940 ntTSL 5 BASIC5.19□□□□□ -1.58
RNF223E7ERA6 ATP1A1-203ENST00000369496 3572 ntTSL 2 BASIC5.19□□□□□ -1.58
RNF223E7ERA6 SORBS1-202ENST00000306402 5858 ntAPPRIS ALT2 TSL 1 (best) BASIC5.18□□□□□ -1.58
RNF223E7ERA6 GCNT2-201ENST00000265012 4214 ntAPPRIS P3 TSL 1 (best) BASIC5.18□□□□□ -1.58
RNF223E7ERA6 ELAVL4-203ENST00000371821 3349 ntTSL 5 BASIC5.18□□□□□ -1.58
RNF223E7ERA6 AC110597.1-201ENST00000562669 3176 ntBASIC5.18□□□□□ -1.58
RNF223E7ERA6 CXCL9-201ENST00000264888 2740 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
RNF223E7ERA6 GPR1-201ENST00000407325 2295 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
RNF223E7ERA6 UBE4A-203ENST00000545354 2149 ntTSL 2 BASIC5.18□□□□□ -1.58
RNF223E7ERA6 ZNF462-201ENST00000277225 10414 ntAPPRIS P2 TSL 1 (best) BASIC5.18□□□□□ -1.58
RNF223E7ERA6 ADAM20-201ENST00000256389 2795 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
RNF223E7ERA6 DTNA-206ENST00000399121 6490 ntAPPRIS ALT2 TSL 1 (best) BASIC5.18□□□□□ -1.58
RNF223E7ERA6 NOX4-211ENST00000528341 1899 ntTSL 2 BASIC5.18□□□□□ -1.58
RNF223E7ERA6 CERS3-203ENST00000538112 1856 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
RNF223E7ERA6 SGK3-201ENST00000345714 4055 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
RNF223E7ERA6 ZBTB8A-202ENST00000373510 7075 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
RNF223E7ERA6 AL596244.1-201ENST00000567068 3779 ntBASIC5.18□□□□□ -1.58
RNF223E7ERA6 RASGEF1B-214ENST00000638048 2386 ntTSL 5 BASIC5.18□□□□□ -1.58
RNF223E7ERA6 RAPGEF4-203ENST00000397087 4120 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
RNF223E7ERA6 TTI1-202ENST00000373448 3958 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
RNF223E7ERA6 ATP8B5P-203ENST00000430846 3962 ntTSL 2 BASIC5.18□□□□□ -1.58
RNF223E7ERA6 WFDC11-202ENST00000356562 642 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
RNF223E7ERA6 RNU1-49P-201ENST00000363468 159 ntBASIC5.18□□□□□ -1.58
RNF223E7ERA6 Y_RNA.287-201ENST00000364853 94 ntBASIC5.18□□□□□ -1.58
RNF223E7ERA6 RNU6-880P-201ENST00000384526 107 ntBASIC5.18□□□□□ -1.58
RNF223E7ERA6 AL591034.1-201ENST00000407447 340 ntBASIC5.18□□□□□ -1.58
RNF223E7ERA6 AC245096.1-201ENST00000413104 546 ntBASIC5.18□□□□□ -1.58
RNF223E7ERA6 AC119751.6-201ENST00000416712 186 ntBASIC5.18□□□□□ -1.58
RNF223E7ERA6 RPL36P18-201ENST00000419316 318 ntBASIC5.18□□□□□ -1.58
RNF223E7ERA6 AC008065.1-201ENST00000428525 348 ntBASIC5.18□□□□□ -1.58
RNF223E7ERA6 AC112220.1-201ENST00000434628 355 ntBASIC5.18□□□□□ -1.58
RNF223E7ERA6 AC064862.4-201ENST00000442180 334 ntBASIC5.18□□□□□ -1.58
RNF223E7ERA6 AL158147.1-201ENST00000443970 75 ntBASIC5.18□□□□□ -1.58
RNF223E7ERA6 IGHV5-78-201ENST00000450948 295 ntBASIC5.18□□□□□ -1.58
RNF223E7ERA6 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC5.18□□□□□ -1.58
RNF223E7ERA6 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC5.18□□□□□ -1.58
RNF223E7ERA6 AC010343.2-201ENST00000510162 224 ntBASIC5.18□□□□□ -1.58
RNF223E7ERA6 AC011389.1-203ENST00000513790 573 ntTSL 4 BASIC5.18□□□□□ -1.58
RNF223E7ERA6 RNU6-572P-201ENST00000516724 80 ntBASIC5.18□□□□□ -1.58
RNF223E7ERA6 IGKV1D-22-201ENST00000518953 324 ntBASIC5.18□□□□□ -1.58
RNF223E7ERA6 AC009623.2-201ENST00000522524 465 ntTSL 3 BASIC5.18□□□□□ -1.58
RNF223E7ERA6 AP002815.1-201ENST00000533740 386 ntTSL 3 BASIC5.18□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 102.7 ms