Protein–RNA interactions for Protein: A6NMZ7

COL6A6, Collagen alpha-6(VI) chain, humanhuman

Predictions only

Length 2,263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A6A6NMZ7 AC104365.3-201ENST00000587011 625 ntTSL 5 BASIC1.57□□□□□ -2.16
COL6A6A6NMZ7 AC013562.2-201ENST00000611632 603 ntBASIC1.57□□□□□ -2.16
COL6A6A6NMZ7 RBMS3-AS3-202ENST00000635847 738 ntTSL 5 BASIC1.57□□□□□ -2.16
COL6A6A6NMZ7 AL163152.1-201ENST00000642001 374 ntBASIC1.57□□□□□ -2.16
COL6A6A6NMZ7 ZNF720P1-201ENST00000562403 1939 ntBASIC1.57□□□□□ -2.16
COL6A6A6NMZ7 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC1.57□□□□□ -2.16
COL6A6A6NMZ7 CXCL11-201ENST00000306621 1606 ntAPPRIS P1 TSL 1 (best) BASIC1.57□□□□□ -2.16
COL6A6A6NMZ7 ZNF876P-202ENST00000398732 1485 ntBASIC1.56□□□□□ -2.16
COL6A6A6NMZ7 Y_RNA.295-201ENST00000364918 102 ntBASIC1.56□□□□□ -2.16
COL6A6A6NMZ7 SPINK9-201ENST00000377906 453 ntAPPRIS P2 TSL 1 (best) BASIC1.56□□□□□ -2.16
COL6A6A6NMZ7 MIR598-201ENST00000384868 97 ntBASIC1.56□□□□□ -2.16
COL6A6A6NMZ7 RNU6ATAC16P-201ENST00000408591 138 ntBASIC1.56□□□□□ -2.16
COL6A6A6NMZ7 PRELID3BP11-201ENST00000414230 479 ntBASIC1.56□□□□□ -2.16
COL6A6A6NMZ7 AL136369.2-201ENST00000420825 537 ntTSL 3 BASIC1.56□□□□□ -2.16
COL6A6A6NMZ7 AL354977.1-201ENST00000438147 679 ntTSL 5 BASIC1.56□□□□□ -2.16
COL6A6A6NMZ7 AC093579.1-201ENST00000439455 352 ntTSL 2 BASIC1.56□□□□□ -2.16
COL6A6A6NMZ7 AP003049.1-201ENST00000529418 457 ntBASIC1.56□□□□□ -2.16
COL6A6A6NMZ7 AC004923.2-201ENST00000529649 369 ntBASIC1.56□□□□□ -2.16
COL6A6A6NMZ7 RPL21P5-201ENST00000554662 472 ntBASIC1.56□□□□□ -2.16
COL6A6A6NMZ7 AC233266.2-201ENST00000567067 528 ntBASIC1.56□□□□□ -2.16
COL6A6A6NMZ7 MIR4512-201ENST00000583257 77 ntBASIC1.56□□□□□ -2.16
COL6A6A6NMZ7 MIR151B-201ENST00000584249 96 ntBASIC1.56□□□□□ -2.16
COL6A6A6NMZ7 AC004542.1-201ENST00000602955 264 ntTSL 3 BASIC1.56□□□□□ -2.16
COL6A6A6NMZ7 OR4H6P-202ENST00000603819 340 ntBASIC1.56□□□□□ -2.16
COL6A6A6NMZ7 AC090525.3-201ENST00000605601 189 ntBASIC1.56□□□□□ -2.16
COL6A6A6NMZ7 AC055764.2-201ENST00000610089 670 ntBASIC1.56□□□□□ -2.16
COL6A6A6NMZ7 SOBP-204ENST00000618129 1550 ntTSL 1 (best) BASIC1.56□□□□□ -2.16
COL6A6A6NMZ7 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC1.56□□□□□ -2.16
COL6A6A6NMZ7 AC096656.1-201ENST00000623826 1364 ntBASIC1.56□□□□□ -2.16
COL6A6A6NMZ7 KLRF1-201ENST00000279545 1091 ntTSL 1 (best) BASIC1.56□□□□□ -2.16
COL6A6A6NMZ7 TAS2R15P-201ENST00000390674 928 ntBASIC1.56□□□□□ -2.16
COL6A6A6NMZ7 TAF9BP2-201ENST00000400856 499 ntBASIC1.56□□□□□ -2.16
COL6A6A6NMZ7 RNU4-27P-201ENST00000410889 139 ntBASIC1.56□□□□□ -2.16
COL6A6A6NMZ7 EIF1AXP1-201ENST00000419267 435 ntBASIC1.56□□□□□ -2.16
COL6A6A6NMZ7 AC023128.2-201ENST00000420880 1223 ntBASIC1.56□□□□□ -2.16
COL6A6A6NMZ7 FABP5P3-201ENST00000437960 408 ntBASIC1.56□□□□□ -2.16
COL6A6A6NMZ7 HSFY3P-201ENST00000444242 1191 ntBASIC1.56□□□□□ -2.16
COL6A6A6NMZ7 PCCA-AS1-203ENST00000455958 356 ntTSL 3 BASIC1.56□□□□□ -2.16
COL6A6A6NMZ7 AMD1P1-201ENST00000457220 922 ntBASIC1.56□□□□□ -2.16
COL6A6A6NMZ7 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.56□□□□□ -2.16
COL6A6A6NMZ7 AC002460.1-201ENST00000504394 370 ntTSL 3 BASIC1.56□□□□□ -2.16
COL6A6A6NMZ7 MTCO1P31-201ENST00000506355 492 ntBASIC1.56□□□□□ -2.16
COL6A6A6NMZ7 TBCAP3-201ENST00000512475 312 ntBASIC1.56□□□□□ -2.16
COL6A6A6NMZ7 AC027031.1-201ENST00000517318 489 ntTSL 3 BASIC1.56□□□□□ -2.16
COL6A6A6NMZ7 OR8K2P-201ENST00000524645 927 ntBASIC1.56□□□□□ -2.16
COL6A6A6NMZ7 COX6CP5-201ENST00000527162 228 ntBASIC1.56□□□□□ -2.16
COL6A6A6NMZ7 AL356022.1-202ENST00000555433 379 ntTSL 2 BASIC1.56□□□□□ -2.16
COL6A6A6NMZ7 MIR4421-201ENST00000578133 69 ntBASIC1.56□□□□□ -2.16
COL6A6A6NMZ7 MIR4448-201ENST00000584360 86 ntBASIC1.56□□□□□ -2.16
COL6A6A6NMZ7 AL121917.1-203ENST00000605534 577 ntBASIC1.56□□□□□ -2.16
COL6A6A6NMZ7 OR5H6-201ENST00000615035 1113 ntAPPRIS P1 BASIC1.56□□□□□ -2.16
COL6A6A6NMZ7 AC003001.2-201ENST00000616294 831 ntBASIC1.56□□□□□ -2.16
COL6A6A6NMZ7 KLRF1-208ENST00000617889 1241 ntAPPRIS P1 TSL 1 (best) BASIC1.56□□□□□ -2.16
COL6A6A6NMZ7 SKP1-209ENST00000522552 1683 ntAPPRIS ALT1 TSL 1 (best) BASIC1.56□□□□□ -2.16
COL6A6A6NMZ7 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC1.56□□□□□ -2.16
COL6A6A6NMZ7 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC1.55□□□□□ -2.16
COL6A6A6NMZ7 AL121972.1-201ENST00000402023 252 ntBASIC1.55□□□□□ -2.16
COL6A6A6NMZ7 RPL31P52-201ENST00000407532 367 ntBASIC1.55□□□□□ -2.16
COL6A6A6NMZ7 TRIM60P5Y-201ENST00000413946 574 ntBASIC1.55□□□□□ -2.16
COL6A6A6NMZ7 AL078590.2-202ENST00000422736 568 ntTSL 3 BASIC1.55□□□□□ -2.16
COL6A6A6NMZ7 RPL39P40-201ENST00000445481 146 ntBASIC1.55□□□□□ -2.16
COL6A6A6NMZ7 Z99714.1-201ENST00000450463 807 ntBASIC1.55□□□□□ -2.16
COL6A6A6NMZ7 MTND2P3-201ENST00000452458 470 ntBASIC1.55□□□□□ -2.16
COL6A6A6NMZ7 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC1.55□□□□□ -2.16
COL6A6A6NMZ7 AP005660.1-201ENST00000522972 293 ntBASIC1.55□□□□□ -2.16
COL6A6A6NMZ7 AL137100.2-201ENST00000555786 315 ntBASIC1.55□□□□□ -2.16
COL6A6A6NMZ7 AL671309.1-201ENST00000603750 544 ntBASIC1.55□□□□□ -2.16
COL6A6A6NMZ7 AC105429.2-201ENST00000610567 517 ntBASIC1.55□□□□□ -2.16
COL6A6A6NMZ7 AC073569.3-201ENST00000619055 682 ntBASIC1.55□□□□□ -2.16
COL6A6A6NMZ7 PVT1_3.1-201ENST00000620853 95 ntBASIC1.55□□□□□ -2.16
COL6A6A6NMZ7 AC068620.4-201ENST00000636730 1182 ntBASIC1.55□□□□□ -2.16
COL6A6A6NMZ7 Z82195.2-201ENST00000612348 18351 ntBASIC1.55□□□□□ -2.16
COL6A6A6NMZ7 CENPK-201ENST00000242872 1576 ntAPPRIS P1 TSL 1 (best) BASIC1.55□□□□□ -2.16
COL6A6A6NMZ7 RNU6-666P-201ENST00000363499 107 ntBASIC1.55□□□□□ -2.16
COL6A6A6NMZ7 RNA5SP189-201ENST00000364920 115 ntBASIC1.55□□□□□ -2.16
COL6A6A6NMZ7 RNA5SP167-201ENST00000365461 116 ntBASIC1.55□□□□□ -2.16
COL6A6A6NMZ7 BCL2L15-203ENST00000393320 276 ntTSL 1 (best) BASIC1.55□□□□□ -2.16
COL6A6A6NMZ7 AC092685.1-201ENST00000447960 1243 ntBASIC1.55□□□□□ -2.16
COL6A6A6NMZ7 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC1.55□□□□□ -2.16
COL6A6A6NMZ7 LINC02472-201ENST00000512268 575 ntTSL 2 BASIC1.55□□□□□ -2.16
COL6A6A6NMZ7 AC124069.1-201ENST00000517454 735 ntTSL 3 BASIC1.55□□□□□ -2.16
COL6A6A6NMZ7 SNRPGP1-201ENST00000553864 222 ntBASIC1.55□□□□□ -2.16
COL6A6A6NMZ7 AC104581.2-201ENST00000572227 430 ntBASIC1.55□□□□□ -2.16
COL6A6A6NMZ7 AC068408.2-201ENST00000584566 439 ntTSL 3 BASIC1.55□□□□□ -2.16
COL6A6A6NMZ7 AL645939.4-201ENST00000604495 135 ntBASIC1.55□□□□□ -2.16
COL6A6A6NMZ7 AC123768.3-201ENST00000613733 523 ntTSL 3 BASIC1.55□□□□□ -2.16
COL6A6A6NMZ7 AL590396.2-201ENST00000636511 1041 ntBASIC1.55□□□□□ -2.16
COL6A6A6NMZ7 ALG6-201ENST00000263440 1895 ntAPPRIS ALT1 TSL 5 BASIC1.54□□□□□ -2.16
COL6A6A6NMZ7 OR51A4-201ENST00000380373 1002 ntAPPRIS P1 BASIC1.54□□□□□ -2.16
COL6A6A6NMZ7 RNU6-603P-201ENST00000411403 107 ntBASIC1.54□□□□□ -2.16
COL6A6A6NMZ7 RPL9P9-201ENST00000418824 636 ntTSL 2 BASIC1.54□□□□□ -2.16
COL6A6A6NMZ7 FAM204CP-201ENST00000424489 642 ntBASIC1.54□□□□□ -2.16
COL6A6A6NMZ7 AC015971.1-202ENST00000439077 514 ntTSL 3 BASIC1.54□□□□□ -2.16
COL6A6A6NMZ7 AC114878.1-201ENST00000441166 358 ntBASIC1.54□□□□□ -2.16
COL6A6A6NMZ7 FAM104B-204ENST00000472571 1109 ntAPPRIS ALT2 TSL 1 (best) BASIC1.54□□□□□ -2.16
COL6A6A6NMZ7 PDCD10-216ENST00000492396 814 ntTSL 5 BASIC1.54□□□□□ -2.16
COL6A6A6NMZ7 C1GALT1P2-201ENST00000510813 1104 ntBASIC1.54□□□□□ -2.16
COL6A6A6NMZ7 MTATP6P25-201ENST00000574491 261 ntBASIC1.54□□□□□ -2.16
COL6A6A6NMZ7 AC124283.4-201ENST00000581815 456 ntBASIC1.54□□□□□ -2.16
COL6A6A6NMZ7 AC006557.3-201ENST00000592926 517 ntTSL 3 BASIC1.54□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 108 ms