Protein–RNA interactions for Protein: A6NDI0

TRIM49B, Putative tripartite motif-containing protein 49B, humanhuman

Predictions only

Length 452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49BA6NDI0 SAR1AP2-201ENST00000392696 594 ntBASIC3.2□□□□□ -1.9
TRIM49BA6NDI0 HIST1H2APS3-201ENST00000403259 134 ntBASIC3.2□□□□□ -1.9
TRIM49BA6NDI0 MIR1302-8-201ENST00000408342 128 ntBASIC3.2□□□□□ -1.9
TRIM49BA6NDI0 PIGPP2-201ENST00000411569 458 ntBASIC3.2□□□□□ -1.9
TRIM49BA6NDI0 LINC01412-201ENST00000413525 362 ntTSL 2 BASIC3.2□□□□□ -1.9
TRIM49BA6NDI0 TRBV24OR9-2-201ENST00000416632 435 ntBASIC3.2□□□□□ -1.9
TRIM49BA6NDI0 AL589946.1-201ENST00000421465 420 ntTSL 3 BASIC3.2□□□□□ -1.9
TRIM49BA6NDI0 TMEM167AP1-201ENST00000423409 219 ntBASIC3.2□□□□□ -1.9
TRIM49BA6NDI0 USP9YP36-201ENST00000424581 829 ntBASIC3.2□□□□□ -1.9
TRIM49BA6NDI0 TXNL1P1-201ENST00000429528 554 ntBASIC3.2□□□□□ -1.9
TRIM49BA6NDI0 INTS6-AS1-201ENST00000434512 466 ntTSL 3 BASIC3.2□□□□□ -1.9
TRIM49BA6NDI0 AL606662.1-201ENST00000445763 553 ntBASIC3.2□□□□□ -1.9
TRIM49BA6NDI0 AL513422.1-201ENST00000449531 383 ntTSL 2 BASIC3.2□□□□□ -1.9
TRIM49BA6NDI0 RPL30P14-201ENST00000482744 348 ntBASIC3.2□□□□□ -1.9
TRIM49BA6NDI0 AC068724.1-201ENST00000487100 792 ntBASIC3.2□□□□□ -1.9
TRIM49BA6NDI0 COX7A2P2-201ENST00000505291 250 ntBASIC3.2□□□□□ -1.9
TRIM49BA6NDI0 AC096577.1-203ENST00000506386 541 ntTSL 3 BASIC3.2□□□□□ -1.9
TRIM49BA6NDI0 CBX3P3-201ENST00000508108 532 ntBASIC3.2□□□□□ -1.9
TRIM49BA6NDI0 LTV1P1-201ENST00000510683 1237 ntBASIC3.2□□□□□ -1.9
TRIM49BA6NDI0 LINC02144-201ENST00000511417 592 ntTSL 4 BASIC3.2□□□□□ -1.9
TRIM49BA6NDI0 AC010486.3-201ENST00000511602 785 ntBASIC3.2□□□□□ -1.9
TRIM49BA6NDI0 AL137804.1-201ENST00000528872 576 ntTSL 3 BASIC3.2□□□□□ -1.9
TRIM49BA6NDI0 LINC00301-204ENST00000532591 470 ntTSL 2 BASIC3.2□□□□□ -1.9
TRIM49BA6NDI0 AC063948.1-201ENST00000547360 379 ntTSL 5 BASIC3.2□□□□□ -1.9
TRIM49BA6NDI0 AL160191.1-202ENST00000554008 576 ntTSL 4 BASIC3.2□□□□□ -1.9
TRIM49BA6NDI0 AC090888.1-201ENST00000561335 1141 ntBASIC3.2□□□□□ -1.9
TRIM49BA6NDI0 C16orf97-203ENST00000566314 281 ntTSL 3 BASIC3.2□□□□□ -1.9
TRIM49BA6NDI0 AF131215.7-201ENST00000602443 707 ntBASIC3.2□□□□□ -1.9
TRIM49BA6NDI0 LINC02109-204ENST00000602801 563 ntTSL 4 BASIC3.2□□□□□ -1.9
TRIM49BA6NDI0 AL133393.1-201ENST00000603277 287 ntBASIC3.2□□□□□ -1.9
TRIM49BA6NDI0 CLPTM1LP1-201ENST00000604519 484 ntBASIC3.2□□□□□ -1.9
TRIM49BA6NDI0 AC106791.2-201ENST00000604680 391 ntBASIC3.2□□□□□ -1.9
TRIM49BA6NDI0 AC006270.3-201ENST00000605967 1036 ntBASIC3.2□□□□□ -1.9
TRIM49BA6NDI0 AC099566.1-205ENST00000609411 657 ntTSL 5 BASIC3.2□□□□□ -1.9
TRIM49BA6NDI0 AC005332.6-201ENST00000613178 446 ntBASIC3.2□□□□□ -1.9
TRIM49BA6NDI0 NCRUPAR_2.1-201ENST00000616308 99 ntBASIC3.2□□□□□ -1.9
TRIM49BA6NDI0 ATP5A1P2-202ENST00000616464 443 ntBASIC3.2□□□□□ -1.9
TRIM49BA6NDI0 AC078883.4-201ENST00000623218 367 ntBASIC3.2□□□□□ -1.9
TRIM49BA6NDI0 AC120349.2-201ENST00000625002 298 ntBASIC3.2□□□□□ -1.9
TRIM49BA6NDI0 AC092192.1-201ENST00000633154 1018 ntBASIC3.2□□□□□ -1.9
TRIM49BA6NDI0 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC3.2□□□□□ -1.9
TRIM49BA6NDI0 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC3.2□□□□□ -1.9
TRIM49BA6NDI0 SPAM1-202ENST00000340011 2349 ntAPPRIS P4 TSL 1 (best) BASIC3.2□□□□□ -1.9
TRIM49BA6NDI0 AL513185.3-201ENST00000433335 1300 ntBASIC3.19□□□□□ -1.9
TRIM49BA6NDI0 ASNSP3-201ENST00000451989 1306 ntBASIC3.19□□□□□ -1.9
TRIM49BA6NDI0 AC107982.1-201ENST00000507171 1300 ntBASIC3.19□□□□□ -1.9
TRIM49BA6NDI0 TLR6-205ENST00000610323 1443 ntTSL 5 BASIC3.19□□□□□ -1.9
TRIM49BA6NDI0 BIRC3-206ENST00000532808 4238 ntAPPRIS P1 TSL 5 BASIC3.19□□□□□ -1.9
TRIM49BA6NDI0 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
TRIM49BA6NDI0 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC3.19□□□□□ -1.9
TRIM49BA6NDI0 AL391994.1-201ENST00000254724 282 ntBASIC3.19□□□□□ -1.9
TRIM49BA6NDI0 RPS4XP3-201ENST00000398541 413 ntBASIC3.19□□□□□ -1.9
TRIM49BA6NDI0 AL021407.1-201ENST00000404531 386 ntBASIC3.19□□□□□ -1.9
TRIM49BA6NDI0 SSXP9-201ENST00000417503 292 ntBASIC3.19□□□□□ -1.9
TRIM49BA6NDI0 SDCBPP3-201ENST00000419629 891 ntBASIC3.19□□□□□ -1.9
TRIM49BA6NDI0 HSPE1P1-201ENST00000421494 318 ntBASIC3.19□□□□□ -1.9
TRIM49BA6NDI0 AC019178.2-201ENST00000423595 505 ntBASIC3.19□□□□□ -1.9
TRIM49BA6NDI0 RPL27AP8-201ENST00000424277 446 ntBASIC3.19□□□□□ -1.9
TRIM49BA6NDI0 LINC01884-201ENST00000433429 440 ntTSL 3 BASIC3.19□□□□□ -1.9
TRIM49BA6NDI0 MTND4P32-201ENST00000437189 1237 ntBASIC3.19□□□□□ -1.9
TRIM49BA6NDI0 OR5H14-201ENST00000437310 1080 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
TRIM49BA6NDI0 MTCYBP3-201ENST00000445588 1137 ntBASIC3.19□□□□□ -1.9
TRIM49BA6NDI0 CHODL-AS1-201ENST00000447175 1117 ntTSL 2 BASIC3.19□□□□□ -1.9
TRIM49BA6NDI0 AL109741.2-201ENST00000455561 343 ntBASIC3.19□□□□□ -1.9
TRIM49BA6NDI0 MTND3P7-201ENST00000474435 343 ntBASIC3.19□□□□□ -1.9
TRIM49BA6NDI0 AC006483.1-201ENST00000487308 313 ntBASIC3.19□□□□□ -1.9
TRIM49BA6NDI0 LINC02462-201ENST00000503009 430 ntTSL 5 BASIC3.19□□□□□ -1.9
TRIM49BA6NDI0 HMGB1P28-201ENST00000507778 552 ntBASIC3.19□□□□□ -1.9
TRIM49BA6NDI0 POU5F1P7-201ENST00000508759 541 ntBASIC3.19□□□□□ -1.9
TRIM49BA6NDI0 CTD-2350J17.1-201ENST00000509228 362 ntTSL 2 BASIC3.19□□□□□ -1.9
TRIM49BA6NDI0 LINC02500-201ENST00000512547 493 ntTSL 3 BASIC3.19□□□□□ -1.9
TRIM49BA6NDI0 PSMA2P1-201ENST00000526365 646 ntBASIC3.19□□□□□ -1.9
TRIM49BA6NDI0 AL356057.1-201ENST00000533798 831 ntBASIC3.19□□□□□ -1.9
TRIM49BA6NDI0 KLRF1-203ENST00000537723 598 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
TRIM49BA6NDI0 MRPL42-203ENST00000547098 701 ntTSL 3 BASIC3.19□□□□□ -1.9
TRIM49BA6NDI0 CR383656.7-201ENST00000548164 174 ntBASIC3.19□□□□□ -1.9
TRIM49BA6NDI0 SETP7-201ENST00000552169 453 ntBASIC3.19□□□□□ -1.9
TRIM49BA6NDI0 MRPL42-208ENST00000552217 920 ntAPPRIS P2 TSL 2 BASIC3.19□□□□□ -1.9
TRIM49BA6NDI0 AC012170.2-201ENST00000560380 667 ntTSL 3 BASIC3.19□□□□□ -1.9
TRIM49BA6NDI0 NR2F2-AS1-211ENST00000561402 589 ntTSL 3 BASIC3.19□□□□□ -1.9
TRIM49BA6NDI0 AC011471.1-201ENST00000585766 187 ntBASIC3.19□□□□□ -1.9
TRIM49BA6NDI0 AC012493.2-201ENST00000595083 291 ntBASIC3.19□□□□□ -1.9
TRIM49BA6NDI0 AC110760.3-201ENST00000598794 467 ntBASIC3.19□□□□□ -1.9
TRIM49BA6NDI0 AL390838.2-201ENST00000602394 274 ntBASIC3.19□□□□□ -1.9
TRIM49BA6NDI0 Z94722.1-201ENST00000604328 474 ntBASIC3.19□□□□□ -1.9
TRIM49BA6NDI0 AC018714.1-201ENST00000605028 208 ntBASIC3.19□□□□□ -1.9
TRIM49BA6NDI0 MIR8057-201ENST00000620957 69 ntBASIC3.19□□□□□ -1.9
TRIM49BA6NDI0 AC011139.1-202ENST00000637744 563 ntTSL 5 BASIC3.19□□□□□ -1.9
TRIM49BA6NDI0 XKR3-201ENST00000331428 1690 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
TRIM49BA6NDI0 HPGDS-201ENST00000295256 1636 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
TRIM49BA6NDI0 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC3.18□□□□□ -1.9
TRIM49BA6NDI0 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC3.18□□□□□ -1.9
TRIM49BA6NDI0 RPL9P7-201ENST00000330965 580 ntBASIC3.18□□□□□ -1.9
TRIM49BA6NDI0 SNORA38.1-201ENST00000364172 131 ntBASIC3.18□□□□□ -1.9
TRIM49BA6NDI0 SNORA51.4-201ENST00000364993 124 ntBASIC3.18□□□□□ -1.9
TRIM49BA6NDI0 SNORA48.2-201ENST00000390926 124 ntBASIC3.18□□□□□ -1.9
TRIM49BA6NDI0 SNRPEP2-201ENST00000397592 279 ntBASIC3.18□□□□□ -1.9
TRIM49BA6NDI0 NDUFB4P5-201ENST00000415445 361 ntBASIC3.18□□□□□ -1.9
TRIM49BA6NDI0 AC005062.1-204ENST00000415499 743 ntTSL 3 BASIC3.18□□□□□ -1.9
TRIM49BA6NDI0 MRPL50P2-201ENST00000416821 482 ntBASIC3.18□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 105.4 ms