Protein–RNA interactions for Protein: A0A5B6

TCRBV3S1, T-cell receptor beta variable 28 (Fragment), humanhuman

Predictions only

Length 114 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV3S1A0A5B6 AC131280.1-202ENST00000624067 4211 ntBASIC1.54□□□□□ -2.16
TCRBV3S1A0A5B6 ZCCHC10-201ENST00000324170 2178 ntAPPRIS P3 TSL 1 (best) BASIC1.54□□□□□ -2.16
TCRBV3S1A0A5B6 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.53□□□□□ -2.16
TCRBV3S1A0A5B6 UBE2L2-201ENST00000254302 429 ntBASIC1.53□□□□□ -2.16
TCRBV3S1A0A5B6 RN7SKP226-201ENST00000364912 300 ntBASIC1.53□□□□□ -2.16
TCRBV3S1A0A5B6 SNORA70.4-201ENST00000365509 134 ntBASIC1.53□□□□□ -2.16
TCRBV3S1A0A5B6 CFHR3-201ENST00000367425 1645 ntAPPRIS P1 TSL 1 (best) BASIC1.53□□□□□ -2.16
TCRBV3S1A0A5B6 U3.20-201ENST00000390909 217 ntBASIC1.53□□□□□ -2.16
TCRBV3S1A0A5B6 RN7SKP223-201ENST00000410582 62 ntBASIC1.53□□□□□ -2.16
TCRBV3S1A0A5B6 AL445685.2-201ENST00000422551 342 ntBASIC1.53□□□□□ -2.16
TCRBV3S1A0A5B6 AC092017.2-201ENST00000427600 362 ntBASIC1.53□□□□□ -2.16
TCRBV3S1A0A5B6 AC079780.1-201ENST00000428259 207 ntBASIC1.53□□□□□ -2.16
TCRBV3S1A0A5B6 AC010881.1-201ENST00000433830 235 ntBASIC1.53□□□□□ -2.16
TCRBV3S1A0A5B6 RPL35AP22-201ENST00000436855 335 ntBASIC1.53□□□□□ -2.16
TCRBV3S1A0A5B6 CR848007.1-201ENST00000442354 1699 ntBASIC1.53□□□□□ -2.16
TCRBV3S1A0A5B6 AC018643.1-201ENST00000445459 414 ntTSL 5 BASIC1.53□□□□□ -2.16
TCRBV3S1A0A5B6 AP000431.2-201ENST00000450653 790 ntTSL 2 BASIC1.53□□□□□ -2.16
TCRBV3S1A0A5B6 TRGVB-201ENST00000453257 471 ntBASIC1.53□□□□□ -2.16
TCRBV3S1A0A5B6 AC092798.1-201ENST00000458542 409 ntBASIC1.53□□□□□ -2.16
TCRBV3S1A0A5B6 SNORD121B-201ENST00000458838 81 ntBASIC1.53□□□□□ -2.16
TCRBV3S1A0A5B6 SIDT1-AS1-201ENST00000462180 465 ntTSL 3 BASIC1.53□□□□□ -2.16
TCRBV3S1A0A5B6 C1orf112-206ENST00000472795 925 ntAPPRIS ALT2 TSL 2 BASIC1.53□□□□□ -2.16
TCRBV3S1A0A5B6 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC1.53□□□□□ -2.16
TCRBV3S1A0A5B6 AC097467.3-212ENST00000512269 568 ntTSL 3 BASIC1.53□□□□□ -2.16
TCRBV3S1A0A5B6 PRELID3BP4-201ENST00000515476 571 ntBASIC1.53□□□□□ -2.16
TCRBV3S1A0A5B6 EEF1A1P37-201ENST00000522748 715 ntBASIC1.53□□□□□ -2.16
TCRBV3S1A0A5B6 AC100768.1-201ENST00000525512 506 ntTSL 3 BASIC1.53□□□□□ -2.16
TCRBV3S1A0A5B6 ATP5F1P5-201ENST00000526403 760 ntBASIC1.53□□□□□ -2.16
TCRBV3S1A0A5B6 AL136298.1-202ENST00000556520 518 ntTSL 3 BASIC1.53□□□□□ -2.16
TCRBV3S1A0A5B6 AC110588.1-201ENST00000559699 137 ntBASIC1.53□□□□□ -2.16
TCRBV3S1A0A5B6 AC135628.1-201ENST00000568867 534 ntBASIC1.53□□□□□ -2.16
TCRBV3S1A0A5B6 UBE2L4-201ENST00000587688 464 ntBASIC1.53□□□□□ -2.16
TCRBV3S1A0A5B6 AL355812.1-201ENST00000603215 216 ntBASIC1.53□□□□□ -2.16
TCRBV3S1A0A5B6 AC128687.1-201ENST00000605304 619 ntBASIC1.53□□□□□ -2.16
TCRBV3S1A0A5B6 AC073111.2-201ENST00000605657 1075 ntBASIC1.53□□□□□ -2.16
TCRBV3S1A0A5B6 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC1.53□□□□□ -2.16
TCRBV3S1A0A5B6 uc_338.5-201ENST00000611839 155 ntBASIC1.53□□□□□ -2.16
TCRBV3S1A0A5B6 AC159540.2-206ENST00000619371 355 ntTSL 3 BASIC1.53□□□□□ -2.16
TCRBV3S1A0A5B6 AC007998.5-201ENST00000622938 237 ntBASIC1.53□□□□□ -2.16
TCRBV3S1A0A5B6 AC004160.1-201ENST00000625468 929 ntTSL 5 BASIC1.53□□□□□ -2.16
TCRBV3S1A0A5B6 MTND5P10-201ENST00000603719 1809 ntBASIC1.52□□□□□ -2.17
TCRBV3S1A0A5B6 RNU6-989P-201ENST00000362756 107 ntBASIC1.52□□□□□ -2.17
TCRBV3S1A0A5B6 RNU6-1249P-201ENST00000363237 111 ntBASIC1.52□□□□□ -2.17
TCRBV3S1A0A5B6 RNU5D-1-201ENST00000363299 116 ntBASIC1.52□□□□□ -2.17
TCRBV3S1A0A5B6 RNU1-105P-201ENST00000363470 161 ntBASIC1.52□□□□□ -2.17
TCRBV3S1A0A5B6 RNU6-525P-201ENST00000363685 104 ntBASIC1.52□□□□□ -2.17
TCRBV3S1A0A5B6 RFPL3S-202ENST00000382086 455 ntAPPRIS ALT2 TSL 2 BASIC1.52□□□□□ -2.17
TCRBV3S1A0A5B6 MIR493-201ENST00000385254 89 ntBASIC1.52□□□□□ -2.17
TCRBV3S1A0A5B6 MIR320A-201ENST00000385302 82 ntBASIC1.52□□□□□ -2.17
TCRBV3S1A0A5B6 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC1.52□□□□□ -2.17
TCRBV3S1A0A5B6 Z85995.1-201ENST00000415547 335 ntBASIC1.52□□□□□ -2.17
TCRBV3S1A0A5B6 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC1.52□□□□□ -2.17
TCRBV3S1A0A5B6 ZNF736P6Y-201ENST00000447526 1213 ntBASIC1.52□□□□□ -2.17
TCRBV3S1A0A5B6 AC105252.1-201ENST00000503089 286 ntBASIC1.52□□□□□ -2.17
TCRBV3S1A0A5B6 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.52□□□□□ -2.17
TCRBV3S1A0A5B6 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC1.52□□□□□ -2.17
TCRBV3S1A0A5B6 MIR3616-201ENST00000584070 92 ntBASIC1.52□□□□□ -2.17
TCRBV3S1A0A5B6 AC020910.1-201ENST00000599404 413 ntTSL 5 BASIC1.52□□□□□ -2.17
TCRBV3S1A0A5B6 NTAN1P1-201ENST00000603150 646 ntBASIC1.52□□□□□ -2.17
TCRBV3S1A0A5B6 AC025594.3-201ENST00000613068 790 ntBASIC1.52□□□□□ -2.17
TCRBV3S1A0A5B6 AL392048.1-201ENST00000613946 534 ntBASIC1.52□□□□□ -2.17
TCRBV3S1A0A5B6 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC1.52□□□□□ -2.17
TCRBV3S1A0A5B6 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC1.52□□□□□ -2.17
TCRBV3S1A0A5B6 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC1.51□□□□□ -2.17
TCRBV3S1A0A5B6 SDAD1P2-201ENST00000441308 2028 ntBASIC1.51□□□□□ -2.17
TCRBV3S1A0A5B6 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC1.51□□□□□ -2.17
TCRBV3S1A0A5B6 RNU4-31P-201ENST00000384211 141 ntBASIC1.51□□□□□ -2.17
TCRBV3S1A0A5B6 PIGP-204ENST00000399102 688 ntAPPRIS P1 TSL 1 (best) BASIC1.51□□□□□ -2.17
TCRBV3S1A0A5B6 AC019129.1-201ENST00000403786 261 ntBASIC1.51□□□□□ -2.17
TCRBV3S1A0A5B6 RN7SKP101-201ENST00000411376 320 ntBASIC1.51□□□□□ -2.17
TCRBV3S1A0A5B6 RPS15AP38-201ENST00000413110 372 ntBASIC1.51□□□□□ -2.17
TCRBV3S1A0A5B6 SNORD56-201ENST00000413522 71 ntBASIC1.51□□□□□ -2.17
TCRBV3S1A0A5B6 FGF12-AS1-201ENST00000414920 580 ntTSL 4 BASIC1.51□□□□□ -2.17
TCRBV3S1A0A5B6 Z98742.3-201ENST00000418637 326 ntBASIC1.51□□□□□ -2.17
TCRBV3S1A0A5B6 DPH3P2-201ENST00000422618 250 ntBASIC1.51□□□□□ -2.17
TCRBV3S1A0A5B6 AC026355.1-201ENST00000423466 587 ntTSL 5 BASIC1.51□□□□□ -2.17
TCRBV3S1A0A5B6 RPL36P19-201ENST00000430744 301 ntBASIC1.51□□□□□ -2.17
TCRBV3S1A0A5B6 AL392003.1-201ENST00000434394 243 ntBASIC1.51□□□□□ -2.17
TCRBV3S1A0A5B6 AC084149.2-201ENST00000438443 797 ntTSL 5 BASIC1.51□□□□□ -2.17
TCRBV3S1A0A5B6 WASF1P1-201ENST00000447560 1131 ntBASIC1.51□□□□□ -2.17
TCRBV3S1A0A5B6 AL627224.1-201ENST00000448334 444 ntBASIC1.51□□□□□ -2.17
TCRBV3S1A0A5B6 AL137001.1-201ENST00000450212 199 ntTSL 3 BASIC1.51□□□□□ -2.17
TCRBV3S1A0A5B6 AC012355.1-201ENST00000450290 769 ntTSL 3 BASIC1.51□□□□□ -2.17
TCRBV3S1A0A5B6 AC107398.1-201ENST00000486904 505 ntBASIC1.51□□□□□ -2.17
TCRBV3S1A0A5B6 LNCSRLR-201ENST00000490375 709 ntTSL 3 BASIC1.51□□□□□ -2.17
TCRBV3S1A0A5B6 LINC02270-201ENST00000505386 610 ntTSL 1 (best) BASIC1.51□□□□□ -2.17
TCRBV3S1A0A5B6 AC105343.1-201ENST00000505586 358 ntTSL 3 BASIC1.51□□□□□ -2.17
TCRBV3S1A0A5B6 AC114284.1-201ENST00000511422 1114 ntTSL 2 BASIC1.51□□□□□ -2.17
TCRBV3S1A0A5B6 SUB1-211ENST00000512913 684 ntAPPRIS P1 TSL 2 BASIC1.51□□□□□ -2.17
TCRBV3S1A0A5B6 AC107463.1-202ENST00000514526 689 ntTSL 2 BASIC1.51□□□□□ -2.17
TCRBV3S1A0A5B6 RNA5SP182-201ENST00000516064 82 ntBASIC1.51□□□□□ -2.17
TCRBV3S1A0A5B6 HSPE1P18-201ENST00000517602 280 ntBASIC1.51□□□□□ -2.17
TCRBV3S1A0A5B6 AC104232.2-201ENST00000519680 769 ntTSL 5 BASIC1.51□□□□□ -2.17
TCRBV3S1A0A5B6 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC1.51□□□□□ -2.17
TCRBV3S1A0A5B6 AC090888.1-201ENST00000561335 1141 ntBASIC1.51□□□□□ -2.17
TCRBV3S1A0A5B6 MIR4504-201ENST00000577413 92 ntBASIC1.51□□□□□ -2.17
TCRBV3S1A0A5B6 MIR3609-201ENST00000582661 80 ntBASIC1.51□□□□□ -2.17
TCRBV3S1A0A5B6 AL160281.1-201ENST00000605307 311 ntBASIC1.51□□□□□ -2.17
TCRBV3S1A0A5B6 AP005137.2-201ENST00000609238 400 ntBASIC1.51□□□□□ -2.17
TCRBV3S1A0A5B6 AC117490.2-201ENST00000610042 594 ntBASIC1.51□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 117.8 ms