Protein–RNA interactions for Protein: A0A0B4J244

TRAV3, T-cell receptor alpha variable 3 (gene/pseudogene) (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV3A0A0B4J244 AC095057.3-201ENST00000567102 1157 ntBASIC1.68□□□□□ -2.14
TRAV3A0A0B4J244 MIR3921-201ENST00000577308 85 ntBASIC1.68□□□□□ -2.14
TRAV3A0A0B4J244 OR1M4P-201ENST00000589199 287 ntBASIC1.68□□□□□ -2.14
TRAV3A0A0B4J244 AL355802.4-201ENST00000607635 548 ntBASIC1.68□□□□□ -2.14
TRAV3A0A0B4J244 AC096586.1-201ENST00000610267 561 ntBASIC1.68□□□□□ -2.14
TRAV3A0A0B4J244 AL161629.2-201ENST00000615347 275 ntBASIC1.68□□□□□ -2.14
TRAV3A0A0B4J244 AC091925.2-201ENST00000625059 256 ntBASIC1.68□□□□□ -2.14
TRAV3A0A0B4J244 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC1.68□□□□□ -2.14
TRAV3A0A0B4J244 TPTE2P4-201ENST00000258589 1605 ntBASIC1.67□□□□□ -2.14
TRAV3A0A0B4J244 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC1.67□□□□□ -2.14
TRAV3A0A0B4J244 BCL2A1-202ENST00000335661 809 ntTSL 1 (best) BASIC1.67□□□□□ -2.14
TRAV3A0A0B4J244 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC1.67□□□□□ -2.14
TRAV3A0A0B4J244 RNA5SP138-201ENST00000365098 114 ntBASIC1.67□□□□□ -2.14
TRAV3A0A0B4J244 SNORD82-201ENST00000365530 70 ntBASIC1.67□□□□□ -2.14
TRAV3A0A0B4J244 KLRC2-202ENST00000381902 1221 ntAPPRIS P2 TSL 1 (best) BASIC1.67□□□□□ -2.14
TRAV3A0A0B4J244 SNORA51.11-201ENST00000384442 131 ntBASIC1.67□□□□□ -2.14
TRAV3A0A0B4J244 RNU6-1072P-201ENST00000384703 107 ntBASIC1.67□□□□□ -2.14
TRAV3A0A0B4J244 RNU6-443P-201ENST00000384780 107 ntBASIC1.67□□□□□ -2.14
TRAV3A0A0B4J244 RNU6-882P-201ENST00000391025 103 ntBASIC1.67□□□□□ -2.14
TRAV3A0A0B4J244 ZNF736P10Y-201ENST00000403990 1110 ntBASIC1.67□□□□□ -2.14
TRAV3A0A0B4J244 AL023807.1-201ENST00000407932 359 ntBASIC1.67□□□□□ -2.14
TRAV3A0A0B4J244 SNORA11.4-201ENST00000408823 129 ntBASIC1.67□□□□□ -2.14
TRAV3A0A0B4J244 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC1.67□□□□□ -2.14
TRAV3A0A0B4J244 RNU4-53P-201ENST00000410828 140 ntBASIC1.67□□□□□ -2.14
TRAV3A0A0B4J244 HMGB3P2-201ENST00000411913 584 ntBASIC1.67□□□□□ -2.14
TRAV3A0A0B4J244 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC1.67□□□□□ -2.14
TRAV3A0A0B4J244 AL589946.1-201ENST00000421465 420 ntTSL 3 BASIC1.67□□□□□ -2.14
TRAV3A0A0B4J244 MTCO3P30-201ENST00000426425 670 ntBASIC1.67□□□□□ -2.14
TRAV3A0A0B4J244 AL138775.1-201ENST00000429539 575 ntTSL 1 (best) BASIC1.67□□□□□ -2.14
TRAV3A0A0B4J244 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC1.67□□□□□ -2.14
TRAV3A0A0B4J244 UBE2V1P13-201ENST00000436983 439 ntBASIC1.67□□□□□ -2.14
TRAV3A0A0B4J244 AC009296.1-201ENST00000443146 155 ntBASIC1.67□□□□□ -2.14
TRAV3A0A0B4J244 CNTN4-AS2-201ENST00000447256 426 ntTSL 3 BASIC1.67□□□□□ -2.14
TRAV3A0A0B4J244 AL589880.1-201ENST00000448271 287 ntBASIC1.67□□□□□ -2.14
TRAV3A0A0B4J244 HMGN1P5-201ENST00000448591 263 ntBASIC1.67□□□□□ -2.14
TRAV3A0A0B4J244 AC010976.1-211ENST00000454503 644 ntTSL 2 BASIC1.67□□□□□ -2.14
TRAV3A0A0B4J244 AC096666.1-201ENST00000454965 348 ntTSL 3 BASIC1.67□□□□□ -2.14
TRAV3A0A0B4J244 MTCO3P2-201ENST00000457365 171 ntBASIC1.67□□□□□ -2.14
TRAV3A0A0B4J244 AC025033.1-201ENST00000463883 194 ntBASIC1.67□□□□□ -2.14
TRAV3A0A0B4J244 AC107626.1-201ENST00000471084 183 ntBASIC1.67□□□□□ -2.14
TRAV3A0A0B4J244 HSPE1P6-201ENST00000479457 291 ntBASIC1.67□□□□□ -2.14
TRAV3A0A0B4J244 MRPL42P6-201ENST00000486397 371 ntBASIC1.67□□□□□ -2.14
TRAV3A0A0B4J244 OR52A4P-203ENST00000498233 1014 ntBASIC1.67□□□□□ -2.14
TRAV3A0A0B4J244 LINC01335-201ENST00000507890 389 ntTSL 3 BASIC1.67□□□□□ -2.14
TRAV3A0A0B4J244 SUB1-211ENST00000512913 684 ntAPPRIS P1 TSL 2 BASIC1.67□□□□□ -2.14
TRAV3A0A0B4J244 RNU1-40P-201ENST00000516816 164 ntBASIC1.67□□□□□ -2.14
TRAV3A0A0B4J244 RNU1-97P-201ENST00000516872 164 ntBASIC1.67□□□□□ -2.14
TRAV3A0A0B4J244 OR5AK1P-201ENST00000524837 922 ntBASIC1.67□□□□□ -2.14
TRAV3A0A0B4J244 AC124293.1-201ENST00000530034 493 ntBASIC1.67□□□□□ -2.14
TRAV3A0A0B4J244 AC022509.2-201ENST00000540392 699 ntTSL 3 BASIC1.67□□□□□ -2.14
TRAV3A0A0B4J244 GLYCAM1-201ENST00000546596 285 ntBASIC1.67□□□□□ -2.14
TRAV3A0A0B4J244 AL359233.1-201ENST00000554029 364 ntTSL 3 BASIC1.67□□□□□ -2.14
TRAV3A0A0B4J244 AL049835.1-201ENST00000555850 514 ntTSL 3 BASIC1.67□□□□□ -2.14
TRAV3A0A0B4J244 ANKRD36BP2-206ENST00000575193 1245 ntBASIC1.67□□□□□ -2.14
TRAV3A0A0B4J244 OR4K7P-201ENST00000580232 945 ntBASIC1.67□□□□□ -2.14
TRAV3A0A0B4J244 SNORD39.3-201ENST00000584451 71 ntBASIC1.67□□□□□ -2.14
TRAV3A0A0B4J244 AC002984.1-201ENST00000591692 448 ntBASIC1.67□□□□□ -2.14
TRAV3A0A0B4J244 AL022099.1-201ENST00000604551 712 ntBASIC1.67□□□□□ -2.14
TRAV3A0A0B4J244 AP002826.1-201ENST00000608835 315 ntBASIC1.67□□□□□ -2.14
TRAV3A0A0B4J244 AC112503.2-201ENST00000609005 552 ntBASIC1.67□□□□□ -2.14
TRAV3A0A0B4J244 AL354810.1-201ENST00000618134 635 ntTSL 3 BASIC1.67□□□□□ -2.14
TRAV3A0A0B4J244 ZNF658B-202ENST00000615961 3375 ntBASIC1.67□□□□□ -2.14
TRAV3A0A0B4J244 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC1.67□□□□□ -2.14
TRAV3A0A0B4J244 C2orf73-208ENST00000615983 1376 ntTSL 1 (best) BASIC1.67□□□□□ -2.14
TRAV3A0A0B4J244 AC007342.9-201ENST00000623877 1385 ntBASIC1.67□□□□□ -2.14
TRAV3A0A0B4J244 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC1.67□□□□□ -2.14
TRAV3A0A0B4J244 P2RY12-201ENST00000302632 1766 ntAPPRIS P1 TSL 1 (best) BASIC1.67□□□□□ -2.14
TRAV3A0A0B4J244 KLRC1-202ENST00000359151 1407 ntAPPRIS P4 TSL 1 (best) BASIC1.66□□□□□ -2.14
TRAV3A0A0B4J244 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC1.66□□□□□ -2.14
TRAV3A0A0B4J244 CDK1-202ENST00000373809 1613 ntTSL 1 (best) BASIC1.66□□□□□ -2.14
TRAV3A0A0B4J244 STAU2-225ENST00000523558 1603 ntTSL 2 BASIC1.66□□□□□ -2.14
TRAV3A0A0B4J244 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC1.66□□□□□ -2.14
TRAV3A0A0B4J244 DEFB108F-201ENST00000344638 222 ntBASIC1.66□□□□□ -2.14
TRAV3A0A0B4J244 RNU1-105P-201ENST00000363470 161 ntBASIC1.66□□□□□ -2.14
TRAV3A0A0B4J244 RNA5SP37-201ENST00000365420 130 ntBASIC1.66□□□□□ -2.14
TRAV3A0A0B4J244 AL023284.1-201ENST00000403956 276 ntBASIC1.66□□□□□ -2.14
TRAV3A0A0B4J244 AL024474.1-201ENST00000404655 591 ntBASIC1.66□□□□□ -2.14
TRAV3A0A0B4J244 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC1.66□□□□□ -2.14
TRAV3A0A0B4J244 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC1.66□□□□□ -2.14
TRAV3A0A0B4J244 ACTR3BP6-201ENST00000422332 1241 ntBASIC1.66□□□□□ -2.14
TRAV3A0A0B4J244 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC1.66□□□□□ -2.14
TRAV3A0A0B4J244 AL590623.1-201ENST00000427864 105 ntBASIC1.66□□□□□ -2.14
TRAV3A0A0B4J244 AC027124.2-201ENST00000428249 105 ntBASIC1.66□□□□□ -2.14
TRAV3A0A0B4J244 UBE2V2P3-201ENST00000433562 437 ntBASIC1.66□□□□□ -2.14
TRAV3A0A0B4J244 ACBD3-AS1-201ENST00000440540 535 ntTSL 5 BASIC1.66□□□□□ -2.14
TRAV3A0A0B4J244 PGBD4P3-201ENST00000440731 581 ntBASIC1.66□□□□□ -2.14
TRAV3A0A0B4J244 COX6CP12-201ENST00000446748 202 ntBASIC1.66□□□□□ -2.14
TRAV3A0A0B4J244 MYCBP2-AS1-202ENST00000448470 333 ntTSL 3 BASIC1.66□□□□□ -2.14
TRAV3A0A0B4J244 AL139081.1-201ENST00000452207 382 ntTSL 3 BASIC1.66□□□□□ -2.14
TRAV3A0A0B4J244 RNU6-420P-201ENST00000458780 107 ntBASIC1.66□□□□□ -2.14
TRAV3A0A0B4J244 AC087588.1-201ENST00000462203 316 ntBASIC1.66□□□□□ -2.14
TRAV3A0A0B4J244 OR52A4P-202ENST00000481634 799 ntBASIC1.66□□□□□ -2.14
TRAV3A0A0B4J244 APOA2-210ENST00000491350 263 ntTSL 1 (best) BASIC1.66□□□□□ -2.14
TRAV3A0A0B4J244 AC008700.1-201ENST00000512571 654 ntTSL 3 BASIC1.66□□□□□ -2.14
TRAV3A0A0B4J244 AC093248.1-201ENST00000513197 417 ntTSL 2 BASIC1.66□□□□□ -2.14
TRAV3A0A0B4J244 AC103833.1-201ENST00000517442 172 ntBASIC1.66□□□□□ -2.14
TRAV3A0A0B4J244 AC011586.1-201ENST00000521055 458 ntTSL 3 BASIC1.66□□□□□ -2.14
TRAV3A0A0B4J244 DEFB108D-201ENST00000527787 222 ntBASIC1.66□□□□□ -2.14
TRAV3A0A0B4J244 OR4P1P-201ENST00000530808 1136 ntBASIC1.66□□□□□ -2.14
TRAV3A0A0B4J244 SNRPGP18-201ENST00000553000 214 ntBASIC1.66□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 99.9 ms