Protein–RNA interactions for Protein: A0A0B4J238

TRAV1-2, T-cell receptor alpha variable 1-2 (Fragment), humanhuman

Predictions only

Length 106 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV1-2A0A0B4J238 HMGB1P24-202ENST00000615653 685 ntBASIC1.32□□□□□ -2.2
TRAV1-2A0A0B4J238 MIR7974-201ENST00000615835 79 ntBASIC1.32□□□□□ -2.2
TRAV1-2A0A0B4J238 AC068880.5-201ENST00000624331 290 ntBASIC1.32□□□□□ -2.2
TRAV1-2A0A0B4J238 AC004944.1-201ENST00000517807 3059 ntBASIC1.32□□□□□ -2.2
TRAV1-2A0A0B4J238 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC1.32□□□□□ -2.2
TRAV1-2A0A0B4J238 CEP83-202ENST00000397807 2737 ntTSL 5 BASIC1.31□□□□□ -2.2
TRAV1-2A0A0B4J238 AC006026.1-201ENST00000444025 1803 ntBASIC1.31□□□□□ -2.2
TRAV1-2A0A0B4J238 RNA5SP258-201ENST00000362750 119 ntBASIC1.31□□□□□ -2.2
TRAV1-2A0A0B4J238 RNU6-31P-201ENST00000384388 108 ntBASIC1.31□□□□□ -2.2
TRAV1-2A0A0B4J238 NRG4-201ENST00000394907 1159 ntAPPRIS P1 TSL 1 (best) BASIC1.31□□□□□ -2.2
TRAV1-2A0A0B4J238 MTATP6P31-201ENST00000406985 692 ntBASIC1.31□□□□□ -2.2
TRAV1-2A0A0B4J238 AC003092.1-201ENST00000415536 639 ntTSL 3 BASIC1.31□□□□□ -2.2
TRAV1-2A0A0B4J238 MTCO3P12-201ENST00000416718 547 ntBASIC1.31□□□□□ -2.2
TRAV1-2A0A0B4J238 AL365496.1-201ENST00000426885 215 ntBASIC1.31□□□□□ -2.2
TRAV1-2A0A0B4J238 LINC01037-201ENST00000427337 424 ntTSL 5 BASIC1.31□□□□□ -2.2
TRAV1-2A0A0B4J238 AC006548.1-201ENST00000427470 102 ntBASIC1.31□□□□□ -2.2
TRAV1-2A0A0B4J238 LINC01817-201ENST00000429317 564 ntTSL 4 BASIC1.31□□□□□ -2.2
TRAV1-2A0A0B4J238 VN1R108P-201ENST00000431580 830 ntBASIC1.31□□□□□ -2.2
TRAV1-2A0A0B4J238 AC023512.1-201ENST00000444513 499 ntBASIC1.31□□□□□ -2.2
TRAV1-2A0A0B4J238 COX6CP12-201ENST00000446748 202 ntBASIC1.31□□□□□ -2.2
TRAV1-2A0A0B4J238 RGS5-217ENST00000451759 835 ntTSL 3 BASIC1.31□□□□□ -2.2
TRAV1-2A0A0B4J238 CHRM3-AS2-203ENST00000458325 895 ntTSL 2 BASIC1.31□□□□□ -2.2
TRAV1-2A0A0B4J238 AP001486.1-201ENST00000463339 476 ntBASIC1.31□□□□□ -2.2
TRAV1-2A0A0B4J238 AC004884.2-201ENST00000476569 546 ntTSL 4 BASIC1.31□□□□□ -2.2
TRAV1-2A0A0B4J238 VPS26A-206ENST00000489794 928 ntTSL 3 BASIC1.31□□□□□ -2.2
TRAV1-2A0A0B4J238 AC096751.1-202ENST00000502691 1067 ntBASIC1.31□□□□□ -2.2
TRAV1-2A0A0B4J238 AC020699.1-201ENST00000505161 445 ntBASIC1.31□□□□□ -2.2
TRAV1-2A0A0B4J238 AC087272.1-201ENST00000523624 533 ntBASIC1.31□□□□□ -2.2
TRAV1-2A0A0B4J238 AP002812.3-201ENST00000527012 551 ntTSL 5 BASIC1.31□□□□□ -2.2
TRAV1-2A0A0B4J238 AC027458.1-201ENST00000563639 613 ntTSL 1 (best) BASIC1.31□□□□□ -2.2
TRAV1-2A0A0B4J238 LINC02210-208ENST00000585118 546 ntTSL 1 (best) BASIC1.31□□□□□ -2.2
TRAV1-2A0A0B4J238 BX248123.2-201ENST00000606318 124 ntBASIC1.31□□□□□ -2.2
TRAV1-2A0A0B4J238 NEAT1-205ENST00000616315 483 ntTSL 2 BASIC1.31□□□□□ -2.2
TRAV1-2A0A0B4J238 CR381572.1-201ENST00000625098 102 ntBASIC1.31□□□□□ -2.2
TRAV1-2A0A0B4J238 CENPK-201ENST00000242872 1576 ntAPPRIS P1 TSL 1 (best) BASIC1.3□□□□□ -2.2
TRAV1-2A0A0B4J238 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.3□□□□□ -2.2
TRAV1-2A0A0B4J238 RNU6-452P-201ENST00000384406 107 ntBASIC1.3□□□□□ -2.2
TRAV1-2A0A0B4J238 PRRC2CP1-201ENST00000404428 159 ntBASIC1.3□□□□□ -2.2
TRAV1-2A0A0B4J238 RNU4ATAC16P-201ENST00000408512 126 ntBASIC1.3□□□□□ -2.2
TRAV1-2A0A0B4J238 AC099566.1-204ENST00000413825 943 ntTSL 3 BASIC1.3□□□□□ -2.2
TRAV1-2A0A0B4J238 RPS3AP9-201ENST00000417027 792 ntBASIC1.3□□□□□ -2.2
TRAV1-2A0A0B4J238 AL589935.1-212ENST00000450998 525 ntTSL 2 BASIC1.3□□□□□ -2.2
TRAV1-2A0A0B4J238 TH2LCRR-203ENST00000457489 439 ntTSL 3 BASIC1.3□□□□□ -2.2
TRAV1-2A0A0B4J238 RNA5SP233-201ENST00000459153 113 ntBASIC1.3□□□□□ -2.2
TRAV1-2A0A0B4J238 RPL31P41-201ENST00000477967 372 ntBASIC1.3□□□□□ -2.2
TRAV1-2A0A0B4J238 AC104564.1-201ENST00000493028 407 ntBASIC1.3□□□□□ -2.2
TRAV1-2A0A0B4J238 LINC02118-202ENST00000510583 419 ntTSL 3 BASIC1.3□□□□□ -2.2
TRAV1-2A0A0B4J238 AC118465.1-201ENST00000513820 1271 ntBASIC1.3□□□□□ -2.2
TRAV1-2A0A0B4J238 AC017037.2-201ENST00000513850 890 ntBASIC1.3□□□□□ -2.2
TRAV1-2A0A0B4J238 AC067904.2-201ENST00000517322 1283 ntBASIC1.3□□□□□ -2.2
TRAV1-2A0A0B4J238 COX6B1P6-201ENST00000522347 255 ntBASIC1.3□□□□□ -2.2
TRAV1-2A0A0B4J238 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC1.3□□□□□ -2.2
TRAV1-2A0A0B4J238 AP000867.2-201ENST00000532468 320 ntBASIC1.3□□□□□ -2.2
TRAV1-2A0A0B4J238 AC011773.2-201ENST00000551479 285 ntTSL 5 BASIC1.3□□□□□ -2.2
TRAV1-2A0A0B4J238 MIR4648-201ENST00000580107 72 ntBASIC1.3□□□□□ -2.2
TRAV1-2A0A0B4J238 AC024563.1-202ENST00000597533 419 ntTSL 3 BASIC1.3□□□□□ -2.2
TRAV1-2A0A0B4J238 AL096840.1-201ENST00000603287 93 ntBASIC1.3□□□□□ -2.2
TRAV1-2A0A0B4J238 AC106900.2-201ENST00000604994 317 ntBASIC1.3□□□□□ -2.2
TRAV1-2A0A0B4J238 AL136363.1-201ENST00000605349 337 ntBASIC1.3□□□□□ -2.2
TRAV1-2A0A0B4J238 AC093673.2-201ENST00000609674 331 ntBASIC1.3□□□□□ -2.2
TRAV1-2A0A0B4J238 AC010678.1-201ENST00000614118 713 ntBASIC1.3□□□□□ -2.2
TRAV1-2A0A0B4J238 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC1.3□□□□□ -2.2
TRAV1-2A0A0B4J238 P2RY12-201ENST00000302632 1766 ntAPPRIS P1 TSL 1 (best) BASIC1.29□□□□□ -2.2
TRAV1-2A0A0B4J238 OR1L1-201ENST00000309623 933 ntAPPRIS P1 BASIC1.29□□□□□ -2.2
TRAV1-2A0A0B4J238 RNU6-374P-201ENST00000364146 108 ntBASIC1.29□□□□□ -2.2
TRAV1-2A0A0B4J238 SNORA16B-201ENST00000364674 135 ntBASIC1.29□□□□□ -2.2
TRAV1-2A0A0B4J238 OR1L1-202ENST00000373686 1083 ntBASIC1.29□□□□□ -2.2
TRAV1-2A0A0B4J238 Y_RNA.510-201ENST00000384511 114 ntBASIC1.29□□□□□ -2.2
TRAV1-2A0A0B4J238 MIR517C-201ENST00000385103 95 ntBASIC1.29□□□□□ -2.2
TRAV1-2A0A0B4J238 RNU6-233P-201ENST00000410845 141 ntBASIC1.29□□□□□ -2.2
TRAV1-2A0A0B4J238 AL162394.1-201ENST00000413271 419 ntTSL 2 BASIC1.29□□□□□ -2.2
TRAV1-2A0A0B4J238 AL139413.1-201ENST00000421309 217 ntBASIC1.29□□□□□ -2.2
TRAV1-2A0A0B4J238 SLC16A12-AS1-201ENST00000423474 405 ntTSL 3 BASIC1.29□□□□□ -2.2
TRAV1-2A0A0B4J238 AC009414.1-201ENST00000427200 443 ntBASIC1.29□□□□□ -2.2
TRAV1-2A0A0B4J238 MRPS33P4-201ENST00000434892 317 ntBASIC1.29□□□□□ -2.2
TRAV1-2A0A0B4J238 AL033504.1-204ENST00000434985 413 ntTSL 2 BASIC1.29□□□□□ -2.2
TRAV1-2A0A0B4J238 AL590399.3-201ENST00000438072 543 ntTSL 5 BASIC1.29□□□□□ -2.2
TRAV1-2A0A0B4J238 HMGB1P18-201ENST00000438801 619 ntBASIC1.29□□□□□ -2.2
TRAV1-2A0A0B4J238 RNF2P1-201ENST00000442955 1010 ntBASIC1.29□□□□□ -2.2
TRAV1-2A0A0B4J238 SSXP1-201ENST00000453640 473 ntBASIC1.29□□□□□ -2.2
TRAV1-2A0A0B4J238 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC1.29□□□□□ -2.2
TRAV1-2A0A0B4J238 AL135752.1-201ENST00000479477 471 ntBASIC1.29□□□□□ -2.2
TRAV1-2A0A0B4J238 LINC01995-201ENST00000489016 621 ntTSL 3 BASIC1.29□□□□□ -2.2
TRAV1-2A0A0B4J238 ELOC-204ENST00000519487 814 ntAPPRIS P1 TSL 2 BASIC1.29□□□□□ -2.2
TRAV1-2A0A0B4J238 HMGB1P46-201ENST00000520062 610 ntBASIC1.29□□□□□ -2.2
TRAV1-2A0A0B4J238 AL355076.2-202ENST00000553754 574 ntTSL 4 BASIC1.29□□□□□ -2.2
TRAV1-2A0A0B4J238 AP005205.1-201ENST00000563503 508 ntBASIC1.29□□□□□ -2.2
TRAV1-2A0A0B4J238 CC2D2B-209ENST00000618242 980 ntTSL 5 BASIC1.29□□□□□ -2.2
TRAV1-2A0A0B4J238 AC097372.4-201ENST00000625025 466 ntBASIC1.29□□□□□ -2.2
TRAV1-2A0A0B4J238 LINC02246-204ENST00000625278 740 ntTSL 5 BASIC1.29□□□□□ -2.2
TRAV1-2A0A0B4J238 SOX2-OT-255ENST00000630150 649 ntTSL 5 BASIC1.29□□□□□ -2.2
TRAV1-2A0A0B4J238 BX649567.1-201ENST00000642071 1134 ntBASIC1.29□□□□□ -2.2
TRAV1-2A0A0B4J238 HSFY1P1-202ENST00000425038 1381 ntTSL 1 (best) BASIC1.29□□□□□ -2.2
TRAV1-2A0A0B4J238 MTND4P23-201ENST00000447723 1363 ntBASIC1.29□□□□□ -2.2
TRAV1-2A0A0B4J238 AL137003.2-201ENST00000606924 2538 ntBASIC1.29□□□□□ -2.2
TRAV1-2A0A0B4J238 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC1.29□□□□□ -2.2
TRAV1-2A0A0B4J238 AC025034.1-201ENST00000552778 1711 ntTSL 3 BASIC1.29□□□□□ -2.2
TRAV1-2A0A0B4J238 ZNF732-202ENST00000619749 2179 ntAPPRIS ALT2 TSL 2 BASIC1.28□□□□□ -2.2
TRAV1-2A0A0B4J238 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC1.28□□□□□ -2.2
TRAV1-2A0A0B4J238 SNORA68.1-201ENST00000364537 132 ntBASIC1.28□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 98.7 ms